{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,18]],"date-time":"2025-12-18T15:54:51Z","timestamp":1766073291468,"version":"3.48.0"},"reference-count":73,"publisher":"Elsevier BV","issue":"6","license":[{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2025,11,1]],"date-time":"2025-11-01T00:00:00Z","timestamp":1761955200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2025,10,11]],"date-time":"2025-10-11T00:00:00Z","timestamp":1760140800000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Genomics"],"published-print":{"date-parts":[[2025,11]]},"DOI":"10.1016\/j.ygeno.2025.111139","type":"journal-article","created":{"date-parts":[[2025,10,27]],"date-time":"2025-10-27T07:32:28Z","timestamp":1761550348000},"page":"111139","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"title":["Genomic and physiological characterization of beer spoiling Megasphaera spp."],"prefix":"10.1016","volume":"117","author":[{"given":"Manuel J.","family":"Arnold","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Matthias A.","family":"Ehrmann","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yohanes N.","family":"Kurniawan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Koji","family":"Suzuki","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wolfgang","family":"Liebl","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"78","reference":[{"year":"2008","series-title":"Beer in Health and Disease Prevention","key":"10.1016\/j.ygeno.2025.111139_bb0005"},{"issue":"4","key":"10.1016\/j.ygeno.2025.111139_bb0010","doi-asserted-by":"crossref","first-page":"327","DOI":"10.1111\/j.1365-2672.1992.tb01843.x","article-title":"Factors affecting antibacterial activity of hop compounds and their derivatives","volume":"72","author":"Simpson","year":"1992","journal-title":"J. Appl. Bacteriol."},{"issue":"2","key":"10.1016\/j.ygeno.2025.111139_bb0015","doi-asserted-by":"crossref","first-page":"116","DOI":"10.1080\/15428052.2018.1509754","article-title":"Isolation of beer-spoiling bacteria from Texas craft breweries","volume":"18","author":"Goodman","year":"2020","journal-title":"J. Culinary Sci. Tech."},{"issue":"4","key":"10.1016\/j.ygeno.2025.111139_bb0020","doi-asserted-by":"crossref","first-page":"498","DOI":"10.1002\/j.2050-0416.2011.tb00497.x","article-title":"Occurrence of Pectinatus and Megasphaera in the major UK breweries","volume":"117","author":"Paradh","year":"2011","journal-title":"J. Inst. Brew."},{"issue":"2","key":"10.1016\/j.ygeno.2025.111139_bb0025","doi-asserted-by":"crossref","first-page":"173","DOI":"10.1002\/jib.486","article-title":"Statistical evaluation of beer spoilage bacteria by real-time PCR analyses from 2010 to 2016","volume":"124","author":"Schneiderbanger","year":"2018","journal-title":"J. Inst. Brew."},{"issue":"4","key":"10.1016\/j.ygeno.2025.111139_bb0030","first-page":"245","article-title":"Emergence of new spoilage microorganisms in the brewing industry and development of microbiological quality control methods to cope with this phenomenon: a review","volume":"78","author":"Suzuki","year":"2020","journal-title":"J. Am. Soc. Brew. Chem."},{"year":"2009","series-title":"Die Technologie der W\u00fcrzebereitung","author":"Narzi\u00df","key":"10.1016\/j.ygeno.2025.111139_bb0035"},{"key":"10.1016\/j.ygeno.2025.111139_bb0040","doi-asserted-by":"crossref","DOI":"10.1093\/femsle\/fnad071","article-title":"Proposal of names for 329 higher rank taxa defined in the genome taxonomy database under two prokaryotic codes","volume":"370","author":"Chuvochina","year":"2023","journal-title":"FEMS Microbiol. Lett."},{"issue":"3","key":"10.1016\/j.ygeno.2025.111139_bb0045","doi-asserted-by":"crossref","first-page":"287","DOI":"10.1016\/S0723-2020(85)80033-3","article-title":"Megasphaera cerevisiae sp. nov.: a new gram-negative obligately anaerobic coccus isolated from spoiled beer","volume":"6","author":"Engelmann","year":"1985","journal-title":"Syst. Appl. Microbiol."},{"issue":"Pt 4","key":"10.1016\/j.ygeno.2025.111139_bb0050","doi-asserted-by":"crossref","first-page":"695","DOI":"10.1099\/ijs.0.63699-0","article-title":"Megasphaera paucivorans sp. nov., Megasphaera sueciensis sp. nov. and Pectinatus haikarae sp. nov., isolated from brewery samples, and emended description of the genus Pectinatus","volume":"56","author":"Juvonen","year":"2006","journal-title":"Int. J. Syst. Evol. Microbiol."},{"year":"2009","series-title":"Megasphaera, 1\u201316","author":"Marchandin","key":"10.1016\/j.ygeno.2025.111139_bb0055"},{"key":"10.1016\/j.ygeno.2025.111139_bb0060","doi-asserted-by":"crossref","first-page":"1387","DOI":"10.3389\/fmicb.2019.01387","article-title":"Bap and cell surface hydrophobicity are important factors in staphylococcus xylosus biofilm formation","volume":"10","author":"Schiffer","year":"2019","journal-title":"Front. Microbiol."},{"issue":"6","key":"10.1016\/j.ygeno.2025.111139_bb0065","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pcbi.1005595","article-title":"Unicycler: resolving bacterial genome assemblies from short and long sequencing reads","volume":"13","author":"Wick","year":"2017","journal-title":"PLoS Comput. Biol."},{"issue":"D1","key":"10.1016\/j.ygeno.2025.111139_bb0070","doi-asserted-by":"crossref","first-page":"D851","DOI":"10.1093\/nar\/gkx1068","article-title":"RefSeq: an update on prokaryotic genome annotation and curation","volume":"46","author":"Haft","year":"2018","journal-title":"Nucleic Acids Res."},{"issue":"D1","key":"10.1016\/j.ygeno.2025.111139_bb0075","doi-asserted-by":"crossref","first-page":"D1020","DOI":"10.1093\/nar\/gkaa1105","article-title":"RefSeq: expanding the prokaryotic genome annotation pipeline reach with protein family model curation","volume":"49","author":"Li","year":"2021","journal-title":"Nucleic Acids Res."},{"issue":"14","key":"10.1016\/j.ygeno.2025.111139_bb0080","doi-asserted-by":"crossref","first-page":"6614","DOI":"10.1093\/nar\/gkw569","article-title":"NCBI prokaryotic genome annotation pipeline","volume":"44","author":"Tatusova","year":"2016","journal-title":"Nucleic Acids Res."},{"issue":"4","key":"10.1016\/j.ygeno.2025.111139_bb0085","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0060120","article-title":"CMG-biotools, a free workbench for basic comparative microbial genomics","volume":"8","author":"Vesth","year":"2013","journal-title":"PLoS One"},{"key":"10.1016\/j.ygeno.2025.111139_bb0090","doi-asserted-by":"crossref","DOI":"10.1128\/msystems.00291-20","article-title":"GapMind: automated annotation of amino acid biosynthesis","author":"Price","year":"2020","journal-title":"mSystems"},{"issue":"4","key":"10.1016\/j.ygeno.2025.111139_bb0095","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pgen.1010156","article-title":"Filling gaps in bacterial catabolic pathways with computation and high-throughput genetics","volume":"18","author":"Price","year":"2022","journal-title":"PLoS Genet."},{"issue":"1","key":"10.1016\/j.ygeno.2025.111139_bb0100","doi-asserted-by":"crossref","first-page":"16","DOI":"10.1038\/s43705-021-00017-z","article-title":"Automated analysis of genomic sequences facilitates high-throughput and comprehensive description of bacteria","volume":"1","author":"Hitch","year":"2021","journal-title":"ISME communications"},{"key":"10.1016\/j.ygeno.2025.111139_bb0105","doi-asserted-by":"crossref","DOI":"10.1093\/nar\/gkm321","article-title":"KAAS: an automatic genome annotation and pathway reconstruction server","volume":"35","author":"Moriya","year":"2007","journal-title":"Nucleic Acids Res."},{"issue":"W1","key":"10.1016\/j.ygeno.2025.111139_bb0110","doi-asserted-by":"crossref","first-page":"W115","DOI":"10.1093\/nar\/gkad328","article-title":"dbCAN3: automated carbohydrate-active enzyme and substrate annotation","volume":"51","author":"Zheng","year":"2023","journal-title":"Nucleic Acids Res."},{"issue":"6","key":"10.1016\/j.ygeno.2025.111139_bb0115","first-page":"929","article-title":"JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison","volume":"32","author":"Richter","year":"2016","journal-title":"Bioinf (Oxf)"},{"issue":"3","key":"10.1016\/j.ygeno.2025.111139_bb0120","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0152747","article-title":"The identification of novel diagnostic marker genes for the detection of beer spoiling Pediococcus damnosus strains using the BlAst diagnostic gene findEr","volume":"11","author":"Behr","year":"2016","journal-title":"PLoS One"},{"issue":"21","key":"10.1016\/j.ygeno.2025.111139_bb0125","first-page":"3340","article-title":"ISEScan: automated identification of insertion sequence elements in prokaryotic genomes","volume":"33","author":"Xie","year":"2017","journal-title":"Bioinf (Oxf)"},{"issue":"28","key":"10.1016\/j.ygeno.2025.111139_bb0130","first-page":"1","article-title":"MacSyFinder v2: improved modelling and search engine to identify molecular systems in genomes","volume":"3","author":"N\u00e9ron","year":"2023","journal-title":"Peer Community Journal"},{"issue":"1","key":"10.1016\/j.ygeno.2025.111139_bb0135","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/s41467-022-30269-9","article-title":"Systematic and quantitative view of the antiviral arsenal of prokaryotes","volume":"13","author":"Tesson","year":"2022","journal-title":"Nat. Commun."},{"issue":"10","key":"10.1016\/j.ygeno.2025.111139_bb0140","doi-asserted-by":"crossref","first-page":"2045","DOI":"10.3390\/microorganisms12102045","article-title":"Carbohydrate metabolism differentiates Pectinatus and Megasphaera species growing in beer","volume":"12","author":"Arnold","year":"2024","journal-title":"Microorganisms"},{"year":"2016","series-title":"ggplot2: Elegant Graphics for Data Analysis","author":"Wickham","key":"10.1016\/j.ygeno.2025.111139_bb0145"},{"issue":"9","key":"10.1016\/j.ygeno.2025.111139_bb0150","doi-asserted-by":"crossref","first-page":"1600","DOI":"10.1093\/bioinformatics\/btx657","article-title":"heatmaply: an R package for creating interactive cluster heatmaps for online publishing","volume":"34","author":"Galili","year":"2018","journal-title":"Bioinformatics"},{"key":"10.1016\/j.ygeno.2025.111139_bb0155","doi-asserted-by":"crossref","first-page":"1686","DOI":"10.21105\/joss.01686","article-title":"Welcome to the Tidyverse","volume":"43","author":"Wickham","year":"2019","journal-title":"JOSS 4"},{"issue":"7","key":"10.1016\/j.ygeno.2025.111139_bb0160","doi-asserted-by":"crossref","first-page":"3022","DOI":"10.1093\/molbev\/msab120","article-title":"MEGA11: molecular evolutionary genetics analysis version 11","volume":"38","author":"Tamura","year":"2021","journal-title":"Mol. Biol. Evol."},{"issue":"W1","key":"10.1016\/j.ygeno.2025.111139_bb0165","doi-asserted-by":"crossref","first-page":"W443","DOI":"10.1093\/nar\/gkad382","article-title":"PHASTEST: faster than PHASTER, better than PHAST","volume":"51","author":"Wishart","year":"2023","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.ygeno.2025.111139_bb0170","doi-asserted-by":"crossref","first-page":"1215","DOI":"10.3389\/fmicb.2017.01215","article-title":"Outer membrane proteome of Veillonella parvula: a Diderm Firmicute of the human microbiome","volume":"8","author":"Poppleton","year":"2017","journal-title":"Front. Microbiol."},{"issue":"2","key":"10.1016\/j.ygeno.2025.111139_bb0175","doi-asserted-by":"crossref","first-page":"461","DOI":"10.1007\/s00253-012-4334-3","article-title":"RT-qPCR analysis of putative beer-spoilage gene expression during growth of lactobacillus brevis BSO 464 and Pediococcus claussenii ATCC BAA-344(T) in beer","volume":"96","author":"Bergsveinson","year":"2012","journal-title":"Appl. Microbiol. Biotechnol."},{"issue":"5","key":"10.1016\/j.ygeno.2025.111139_bb0180","doi-asserted-by":"crossref","first-page":"596","DOI":"10.1007\/s002530100600","article-title":"Molecular cloning of a putative divalent-cation transporter gene as a new genetic marker for the identification of lactobacillus brevis strains capable of growing in beer","volume":"55","author":"Hayashi","year":"2001","journal-title":"Appl. Microbiol. Biotechnol."},{"issue":"1","key":"10.1016\/j.ygeno.2025.111139_bb0185","first-page":"11","article-title":"Comparative study of two plasmids, pRH45 and pRH 20690, isolated from beer-spoilage lactobacillus brevis ABBC45 and L. lindneri DSM20690 T","volume":"63","author":"Suzuki","year":"2005","journal-title":"J. Am. Soc. Brew. Chem."},{"issue":"2","key":"10.1016\/j.ygeno.2025.111139_bb0190","doi-asserted-by":"crossref","first-page":"249","DOI":"10.1046\/j.1365-2958.1999.01456.x","article-title":"Membrane cyclopropane fatty acid content is a major factor in acid resistance of Escherichia coli","volume":"33","author":"Chang","year":"1999","journal-title":"Mol. Microbiol."},{"issue":"5","key":"10.1016\/j.ygeno.2025.111139_bb0195","doi-asserted-by":"crossref","first-page":"909","DOI":"10.1007\/s00449-020-02287-8","article-title":"Enhanced tolerance to inhibitors of Escherichia coli by heterologous expression of cyclopropane-fatty acid-acyl-phospholipid synthase (cfa) from Halomonas socia","volume":"43","author":"Choi","year":"2020","journal-title":"Bioprocess Biosyst. Eng."},{"key":"10.1016\/j.ygeno.2025.111139_bb0200","doi-asserted-by":"crossref","first-page":"136","DOI":"10.1186\/s13068-018-1133-9","article-title":"A pseudomonas putida efflux pump acts on short-chain alcohols","volume":"11","author":"Basler","year":"2018","journal-title":"Biotechnol. Biofuels"},{"issue":"6","key":"10.1016\/j.ygeno.2025.111139_bb0205","doi-asserted-by":"crossref","DOI":"10.1128\/AEM.02985-18","article-title":"Bioprospecting of native efflux pumps to enhance furfural tolerance in Ethanologenic Escherichia coli","volume":"85","author":"Kurgan","year":"2019","journal-title":"Appl. Environ. Microbiol."},{"issue":"1","key":"10.1016\/j.ygeno.2025.111139_bb0210","doi-asserted-by":"crossref","first-page":"51","DOI":"10.1007\/s00253-019-10226-1","article-title":"Microbial response to acid stress: mechanisms and applications","volume":"104","author":"Guan","year":"2020","journal-title":"Appl. Microbiol. Biotechnol."},{"key":"10.1016\/j.ygeno.2025.111139_bb0215","doi-asserted-by":"crossref","first-page":"33","DOI":"10.1016\/S0168-1605(99)00152-X","article-title":"Improved screening procedure for biogenic amine production by lactic acid bacteria","volume":"53","author":"Bover-Cid","year":"1999","journal-title":"Int. J. Food Microbiol."},{"year":"1954","series-title":"Distribution of Amino Acid Decarboxylases in Enterobacteriaceae","author":"M\u00f8ller","key":"10.1016\/j.ygeno.2025.111139_bb0220"},{"issue":"4","key":"10.1016\/j.ygeno.2025.111139_bb0225","doi-asserted-by":"crossref","first-page":"775","DOI":"10.1111\/j.1365-2672.2012.05246.x","article-title":"Adenosine deamination increases the survival under acidic conditions in Escherichia coli","volume":"112","author":"Sun","year":"2012","journal-title":"J. Appl. Microbiol."},{"issue":"20","key":"10.1016\/j.ygeno.2025.111139_bb0230","doi-asserted-by":"crossref","first-page":"13679","DOI":"10.1074\/jbc.M800869200","article-title":"Solubilization of protein aggregates by the acid stress chaperones HdeA and HdeB","volume":"283","author":"Malki","year":"2008","journal-title":"J. Biol. Chem."},{"issue":"7","key":"10.1016\/j.ygeno.2025.111139_bb0235","doi-asserted-by":"crossref","first-page":"2759","DOI":"10.1128\/JB.01490-06","article-title":"Products of the Escherichia coli acid fitness island attenuate metabolite stress at extremely low pH and mediate a cell density-dependent acid resistance","volume":"189","author":"Mates","year":"2007","journal-title":"J. Bacteriol."},{"issue":"3","key":"10.1016\/j.ygeno.2025.111139_bb0240","doi-asserted-by":"crossref","first-page":"1071","DOI":"10.1073\/pnas.0911610107","article-title":"Protein refolding by pH-triggered chaperone binding and release","volume":"107","author":"Tapley","year":"2010","journal-title":"Proc. Natl. Acad. Sci. USA"},{"issue":"106","key":"10.1016\/j.ygeno.2025.111139_bb0245","doi-asserted-by":"crossref","first-page":"5557","DOI":"10.1073\/pnas.0811811106","article-title":"Structural plasticity of an acid-activated chaperone allows promiscuous substrate binding","volume":"14","author":"Tapley","year":"2009","journal-title":"Proc. Natl. Acad. Sci. USA"},{"issue":"3","key":"10.1016\/j.ygeno.2025.111139_bb0250","doi-asserted-by":"crossref","first-page":"525","DOI":"10.4056\/sigs.4077819","article-title":"Non-contiguous finished genome sequence and description of Megasphaera massiliensis sp. nov","volume":"8","author":"Padmanabhan","year":"2013","journal-title":"Stand. Genomic Sci."},{"issue":"11","key":"10.1016\/j.ygeno.2025.111139_bb0255","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0079353","article-title":"Comparative genome analysis of Megasphaera sp. reveals niche specialization and its potential role in the human gut","volume":"8","author":"Shetty","year":"2013","journal-title":"PLoS One"},{"issue":"5","key":"10.1016\/j.ygeno.2025.111139_bb0260","doi-asserted-by":"crossref","first-page":"865","DOI":"10.1111\/1574-6976.12067","article-title":"Bacterial insertion sequences: their genomic impact and diversity","volume":"38","author":"Siguier","year":"2014","journal-title":"FEMS Microbiol. Rev."},{"issue":"6","key":"10.1016\/j.ygeno.2025.111139_bb0265","doi-asserted-by":"crossref","first-page":"709","DOI":"10.1080\/1040841X.2017.1303661","article-title":"The impact of insertion sequences on bacterial genome plasticity and adaptability","volume":"43","author":"Vandecraen","year":"2017","journal-title":"Crit. Rev. Microbiol."},{"issue":"11","key":"10.1016\/j.ygeno.2025.111139_bb0270","doi-asserted-by":"crossref","first-page":"1556","DOI":"10.1016\/j.chom.2022.09.017","article-title":"An expanded arsenal of immune systems that protect bacteria from phages","volume":"30","author":"Millman","year":"2022","journal-title":"Cell Host Microbe"},{"issue":"3","key":"10.1016\/j.ygeno.2025.111139_bb0275","doi-asserted-by":"crossref","first-page":"426","DOI":"10.1111\/j.1432-1033.1969.tb00707.x","article-title":"Chemical characterization, spatial distribution and function of a lipoprotein (murein-lipoprotein) of the E. coli cell wall. The specific effect of trypsin on the membrane structure","volume":"10","author":"Braun","year":"1969","journal-title":"Eur. J. Biochem."},{"issue":"22","key":"10.1016\/j.ygeno.2025.111139_bb0280","doi-asserted-by":"crossref","first-page":"5953","DOI":"10.1128\/JB.00417-10","article-title":"Cadaverine covalently linked to peptidoglycan is required for interaction between the peptidoglycan and the periplasm-exposed S-layer-homologous domain of major outer membrane protein Mep45 in Selenomonas ruminantium","volume":"192","author":"Kojima","year":"2010","journal-title":"J. Bacteriol."},{"issue":"6","key":"10.1016\/j.ygeno.2025.111139_bb0285","doi-asserted-by":"crossref","first-page":"1282","DOI":"10.1111\/j.1365-2672.2006.02869.x","article-title":"horC confers beer-spoilage ability on hop-sensitive lactobacillus brevis ABBC45cc","volume":"100","author":"Iijima","year":"2006","journal-title":"J. Appl. Microbiol."},{"key":"10.1016\/j.ygeno.2025.111139_bb0290","doi-asserted-by":"crossref","first-page":"60","DOI":"10.1016\/j.ijfoodmicro.2015.08.016","article-title":"Metabolic strategies of beer spoilage lactic acid bacteria in beer","volume":"216","author":"Geissler","year":"2016","journal-title":"Int. J. Food Microbiol."},{"key":"10.1016\/j.ygeno.2025.111139_bb0295","doi-asserted-by":"crossref","DOI":"10.1016\/j.fm.2020.103462","article-title":"Comparative genetic and physiological characterisation of Pectinatus species reveals shared tolerance to beer-associated stressors but halotolerance specific to pickle-associated strains","volume":"90","author":"Kramer","year":"2020","journal-title":"Food Microbiol."},{"issue":"2","key":"10.1016\/j.ygeno.2025.111139_bb0300","doi-asserted-by":"crossref","first-page":"111","DOI":"10.1002\/j.2050-0416.1937.tb05727.x","article-title":"On the relation between the staining properties of bacteria and their reaction towards hop antiseptic","volume":"43","author":"Shimwell","year":"1937","journal-title":"J. Inst. Brew."},{"issue":"8","key":"10.1016\/j.ygeno.2025.111139_bb0305","doi-asserted-by":"crossref","DOI":"10.1128\/genomeA.01686-16","article-title":"Genome sequence of Megasphaera cerevisiae NSB1, a bacterium isolated from a canning line and able to grow in beer with high alcohol content","volume":"5","author":"Bergsveinson","year":"2017","journal-title":"Genome Announc."},{"key":"10.1016\/j.ygeno.2025.111139_bb0310","first-page":"237","article-title":"Development of ethanologenic bacteria","volume":"108","author":"Jarboe","year":"2007","journal-title":"Adv. Biochem. Eng. Biotechnol."},{"key":"10.1016\/j.ygeno.2025.111139_bb0315","doi-asserted-by":"crossref","first-page":"173","DOI":"10.1128\/jb.164.1.173-180.1985","article-title":"Mechanism of ethanol inhibition of fermentation in Zymomonas mobilis CP4","author":"Osman","year":"1985","journal-title":"J. Bacteriol."},{"key":"10.1016\/j.ygeno.2025.111139_bb0320","doi-asserted-by":"crossref","first-page":"233","DOI":"10.1128\/jb.157.1.233-239.1984","article-title":"Effects of ethanol on the Escherichia coli plasma membrane","volume":"1984","author":"Dombek","year":"1984","journal-title":"J. Bacteriol."},{"issue":"4","key":"10.1016\/j.ygeno.2025.111139_bb0325","doi-asserted-by":"crossref","first-page":"305","DOI":"10.3109\/07388558909036741","article-title":"Ethanol tolerance in bacteria","volume":"9","author":"Ingram","year":"1990","journal-title":"Crit. Rev. Biotechnol."},{"issue":"4","key":"10.1016\/j.ygeno.2025.111139_bb0330","doi-asserted-by":"crossref","first-page":"312","DOI":"10.1007\/BF00446969","article-title":"Influence of ethanol on the hopanoid content and the fatty acid pattern in batch and continuous cultures of Zymomonas mobilis","volume":"140","author":"Bringer","year":"1985","journal-title":"Arch. Microbiol."},{"key":"10.1016\/j.ygeno.2025.111139_bb0335","doi-asserted-by":"crossref","first-page":"651","DOI":"10.1146\/annurev.ph.45.030183.003251","article-title":"Lipid digestion and absorption","volume":"45","author":"Carey","year":"1983","journal-title":"Annu. Rev. Physiol."},{"issue":"3","key":"10.1016\/j.ygeno.2025.111139_bb0340","doi-asserted-by":"crossref","first-page":"205","DOI":"10.1006\/fmic.1996.0026","article-title":"Survival ofMegasphaera cerevisiaeheated in laboratory media, wort and beer","volume":"13","author":"Watier","year":"1996","journal-title":"Food Microbiol."},{"issue":"5","key":"10.1016\/j.ygeno.2025.111139_bb0345","doi-asserted-by":"crossref","first-page":"1131","DOI":"10.1099\/13500872-141-5-1131","article-title":"Cellular fatty acyl and alkenyl residues in Megasphaera and Pectinatus species: contrasting profiles and detection of beer spoilage","volume":"141","author":"Helander","year":"1995","journal-title":"Microbiology"},{"key":"10.1016\/j.ygeno.2025.111139_bb0350","doi-asserted-by":"crossref","first-page":"791","DOI":"10.1146\/annurev.micro.50.1.791","article-title":"The F0F1-type ATP synthases of Bacteria: structure and function of the F0 complex","volume":"50","author":"Deckers-Hebestreit","year":"1996","journal-title":"Ann. Rev. Microbiol."},{"key":"10.1016\/j.ygeno.2025.111139_bb0355","doi-asserted-by":"crossref","DOI":"10.1016\/j.ijfoodmicro.2023.110238","article-title":"Manganese uptake mediated by the NRAMP-type transporter MntH is required for acid tolerance in listeria monocytogenes","volume":"399","author":"Wu","year":"2023","journal-title":"Int. J. Food Microbiol."},{"issue":"W1","key":"10.1016\/j.ygeno.2025.111139_bb0360","doi-asserted-by":"crossref","first-page":"W276","DOI":"10.1093\/nar\/gkz282","article-title":"AutoMLST: an automated web server for generating multi-locus species trees highlighting natural product potential","volume":"47","author":"Alanjary","year":"2019","journal-title":"Nucleic Acids Res."},{"issue":"W1","key":"10.1016\/j.ygeno.2025.111139_bb0365","doi-asserted-by":"crossref","first-page":"W521","DOI":"10.1093\/nar\/gkae241","article-title":"The EMBL-EBI job dispatcher sequence analysis tools framework in 2024","volume":"52","author":"Madeira","year":"2024","journal-title":"Nucleic Acids Res."}],"container-title":["Genomics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0888754325001557?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0888754325001557?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2025,12,18]],"date-time":"2025-12-18T15:50:11Z","timestamp":1766073011000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0888754325001557"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,11]]},"references-count":73,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2025,11]]}},"alternative-id":["S0888754325001557"],"URL":"https:\/\/doi.org\/10.1016\/j.ygeno.2025.111139","relation":{},"ISSN":["0888-7543"],"issn-type":[{"type":"print","value":"0888-7543"}],"subject":[],"published":{"date-parts":[[2025,11]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Genomic and physiological characterization of beer spoiling Megasphaera spp.","name":"articletitle","label":"Article Title"},{"value":"Genomics","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ygeno.2025.111139","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2025 The Authors. Published by Elsevier Inc.","name":"copyright","label":"Copyright"}],"article-number":"111139"}}