{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,9]],"date-time":"2026-09-09T15:23:52Z","timestamp":1788967432116,"version":"build-2803163510"},"reference-count":43,"publisher":"Elsevier BV","issue":"5","license":[{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,9,1]],"date-time":"2026-09-01T00:00:00Z","timestamp":1788220800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,8,10]],"date-time":"2026-08-10T00:00:00Z","timestamp":1786320000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100012457","name":"Basic Research and Frontier Exploration Project of Chongqing","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100012457","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["32472891"],"award-info":[{"award-number":["32472891"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["32272859"],"award-info":[{"award-number":["32272859"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["82274046"],"award-info":[{"award-number":["82274046"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100005230","name":"Natural Science Foundation of Chongqing Municipality","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100005230","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100014717","name":"National Natural Science Foundation of China National Outstanding Youth Science Fund Project","doi-asserted-by":"publisher","award":["CSTB2025NSCQ-GPX0319"],"award-info":[{"award-number":["CSTB2025NSCQ-GPX0319"]}],"id":[{"id":"10.13039\/100014717","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Genomics"],"published-print":{"date-parts":[[2026,9]]},"DOI":"10.1016\/j.ygeno.2026.111305","type":"journal-article","created":{"date-parts":[[2026,8,11]],"date-time":"2026-08-11T23:44:32Z","timestamp":1786491872000},"page":"111305","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"title":["A muskrat tissue atlas of small non-coding RNAs and their regulatory roles in muskrat musk secretion"],"prefix":"10.1016","volume":"118","author":[{"given":"Xin","family":"Shi","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lingqian","family":"Yin","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yufei","family":"Zan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Qinglin","family":"Yang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Xiaomeng","family":"Zhang","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yao","family":"Zheng","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Zhengrong","family":"Yuan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chengli","family":"Zheng","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Hang","family":"Jie","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"issue":"10","key":"10.1016\/j.ygeno.2026.111305_bb0005","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0111856","article-title":"Genetics reveal the origin and timing of a cryptic insular introduction of muskrats in North America","volume":"9","author":"Mychajliw","year":"2014","journal-title":"PLoS One"},{"key":"10.1016\/j.ygeno.2026.111305_bb0010","doi-asserted-by":"crossref","first-page":"1189","DOI":"10.1016\/j.ijbiomac.2019.10.045","article-title":"Genomic evidence sheds light on the genetic mechanisms of musk secretion in muskrats","volume":"145","author":"Zhou","year":"2020","journal-title":"Int. J. Biol. Macromol."},{"issue":"24","key":"10.1016\/j.ygeno.2026.111305_bb0015","doi-asserted-by":"crossref","first-page":"3705","DOI":"10.3390\/ani14243705","article-title":"An investigation of the saccharides profile and metabolic gene expression in muskrat scented glands in different secretion seasons","volume":"14","author":"Zhou","year":"2024","journal-title":"Animals (basel)"},{"key":"10.1016\/j.ygeno.2026.111305_bb0020","doi-asserted-by":"crossref","DOI":"10.1155\/2019\/9817949","article-title":"Neuroprotective effects of musk of muskrat on transient focal cerebral ischemia in rats","volume":"2019","author":"Lee","year":"2019","journal-title":"Evid. Based Complement. Alternat. Med."},{"key":"10.1016\/j.ygeno.2026.111305_bb0025","article-title":"Androgen plays an important role in regulating the synthesis of pheromone in the scent gland of muskrat","volume":"217","author":"Jiang","year":"2021","journal-title":"J. Steroid Biochem. Mol. Biol."},{"issue":"10","key":"10.1016\/j.ygeno.2026.111305_bb0030","doi-asserted-by":"crossref","first-page":"1678","DOI":"10.3390\/ani13101678","article-title":"Correlation analysis between muskrat (Ondatra zibethicus) musk and traditional musk","volume":"13","author":"Shi","year":"2023","journal-title":"Animals (Basel)"},{"issue":"3","key":"10.1016\/j.ygeno.2026.111305_bb0035","doi-asserted-by":"crossref","first-page":"505","DOI":"10.24272\/j.issn.2095-8137.2025.094","article-title":"Convergent musk biosynthesis across host and microbiota in musk deer and muskrat","volume":"46","author":"Sun","year":"2025","journal-title":"Zool. Res."},{"issue":"3","key":"10.1016\/j.ygeno.2026.111305_bb0040","doi-asserted-by":"crossref","DOI":"10.1002\/imt2.185","article-title":"Vaginal microbiota are associated with in vitro fertilization during female infertility","volume":"3","author":"Wang","year":"2024","journal-title":"iMeta"},{"issue":"5","key":"10.1016\/j.ygeno.2026.111305_bb0045","article-title":"Transcriptome analysis of muskrat scented glands degeneration mechanism","volume":"12","author":"Li","year":"2017","journal-title":"PLoS One"},{"key":"10.1016\/j.ygeno.2026.111305_bb0050","doi-asserted-by":"crossref","first-page":"15036","DOI":"10.1038\/srep15036","article-title":"Seasonal expression of prolactin receptor in the scented gland of male muskrat (Ondatra zibethicus)","volume":"5","author":"Cao","year":"2015","journal-title":"Sci. Rep."},{"issue":"6","key":"10.1016\/j.ygeno.2026.111305_bb0055","doi-asserted-by":"crossref","first-page":"1033","DOI":"10.1007\/s12041-017-0872-x","article-title":"Illumina-based de novo transcriptome sequencing and analysis of Chinese forest musk deer","volume":"96","author":"Xu","year":"2017","journal-title":"J. Genet."},{"key":"10.1016\/j.ygeno.2026.111305_bb0060","doi-asserted-by":"crossref","DOI":"10.1155\/2019\/4370704","article-title":"microRNA and other small RNA sequence profiling across six tissues of Chinese Forest musk deer (Moschus berezovskii)","volume":"2019","author":"Jie","year":"2019","journal-title":"Biomed. Res. Int."},{"key":"10.1016\/j.ygeno.2026.111305_bb0065","article-title":"The musk chemical composition and microbiota of Chinese forest musk deer males","volume":"6","author":"Li","year":"2016","journal-title":"Sci. Rep."},{"key":"10.1016\/j.ygeno.2026.111305_bb0070","doi-asserted-by":"crossref","DOI":"10.1155\/2019\/9291216","article-title":"Gut microbiome of Chinese forest musk deer examined across gender and age","volume":"2019","author":"Zhao","year":"2019","journal-title":"Biomed. Res. Int."},{"issue":"11","key":"10.1016\/j.ygeno.2026.111305_bb0075","article-title":"An attempted correlation between the fecal microbial community of Chinese Forest Musk Deer (Moschus berezovskii) and differences in musk production and quality","volume":"15","author":"Zheng","year":"2025","journal-title":"Animals (Basel)"},{"issue":"1","key":"10.1016\/j.ygeno.2026.111305_bb0080","doi-asserted-by":"crossref","first-page":"10","DOI":"10.1186\/s40659-017-0116-9","article-title":"Musk gland seasonal development and musk secretion are regulated by the testis in muskrat (Ondatra zibethicus)","volume":"50","author":"Zhang","year":"2017","journal-title":"Biol. Res."},{"issue":"1","key":"10.1016\/j.ygeno.2026.111305_bb0085","doi-asserted-by":"crossref","first-page":"29041","DOI":"10.1038\/s41598-024-80080-3","article-title":"Preliminary exploration of the musk biosynthetic mechanism by transcriptomic sequencing in muskrats","volume":"14","author":"Xu","year":"2024","journal-title":"Sci. Rep."},{"issue":"5","key":"10.1016\/j.ygeno.2026.111305_bb0090","doi-asserted-by":"crossref","first-page":"1088","DOI":"10.24272\/j.issn.2095-8137.2024.037","article-title":"Single nucleus\/cell RNA-seq of the chicken hypothalamic-pituitary-ovarian axis offers new insights into the molecular regulatory mechanisms of ovarian development","volume":"45","author":"Leng","year":"2024","journal-title":"Zool. Res."},{"issue":"11","key":"10.1016\/j.ygeno.2026.111305_bb0095","doi-asserted-by":"crossref","first-page":"1265","DOI":"10.1016\/j.jgg.2024.08.002","article-title":"Insights into left-right asymmetric development of chicken ovary at the single-cell level","volume":"51","author":"Wang","year":"2024","journal-title":"J. Genet. Genomics"},{"key":"10.1016\/j.ygeno.2026.111305_bb0100","doi-asserted-by":"crossref","DOI":"10.1093\/gigascience\/giaf006","article-title":"Multiomics analysis provides insights into musk secretion in muskrat and musk deer","volume":"14","author":"Wang","year":"2025","journal-title":"Gigascience"},{"issue":"1","key":"10.1016\/j.ygeno.2026.111305_bb0105","doi-asserted-by":"crossref","first-page":"64","DOI":"10.1186\/s13045-023-01466-w","article-title":"Small RNA modifications: regulatory molecules and potential applications","volume":"16","author":"Xiong","year":"2023","journal-title":"J. Hematol. Oncol."},{"issue":"5","key":"10.1016\/j.ygeno.2026.111305_bb0110","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1038\/s41580-024-00818-9","article-title":"A guide to the biogenesis and functions of endogenous small non-coding RNAs in animals","volume":"26","author":"Jouravleva","year":"2025","journal-title":"Nat. Rev. Mol. Cell Biol."},{"issue":"2","key":"10.1016\/j.ygeno.2026.111305_bb0115","doi-asserted-by":"crossref","first-page":"123","DOI":"10.1038\/s41580-022-00528-0","article-title":"Emerging roles and functional mechanisms of PIWI-interacting RNAs","volume":"24","author":"Wang","year":"2023","journal-title":"Nat. Rev. Mol. Cell Biol."},{"issue":"6","key":"10.1016\/j.ygeno.2026.111305_bb0120","article-title":"tRNA-derived RNAs: biogenesis and roles in translational control","volume":"14","author":"Akiyama","year":"2023","journal-title":"Wiley Interdiscip. Rev.: RNA"},{"issue":"1","key":"10.1016\/j.ygeno.2026.111305_bb0125","doi-asserted-by":"crossref","first-page":"37","DOI":"10.1093\/nar\/gkr688","article-title":"miRDeep2 accurately identifies known and hundreds of novel microRNA genes in seven animal clades","volume":"40","author":"Friedl\u00e4nder","year":"2012","journal-title":"Nucleic Acids Res."},{"issue":"8","key":"10.1016\/j.ygeno.2026.111305_bb0130","doi-asserted-by":"crossref","first-page":"3865","DOI":"10.1093\/nar\/gkw116","article-title":"Distribution of miRNA expression across human tissues","volume":"44","author":"Ludwig","year":"2016","journal-title":"Nucleic Acids Res."},{"key":"10.1016\/j.ygeno.2026.111305_bb0135","series-title":"Expression Profiling of miRNA in the Muskrat Scent Glands at Different Stages of Scent Production","author":"Cui","year":"2024"},{"issue":"1","key":"10.1016\/j.ygeno.2026.111305_bb0140","doi-asserted-by":"crossref","first-page":"1523","DOI":"10.1038\/s41467-019-09234-6","article-title":"Metascape provides a biologist-oriented resource for the analysis of systems-level datasets","volume":"10","author":"Zhou","year":"2019","journal-title":"Nat. Commun."},{"issue":"23","key":"10.1016\/j.ygeno.2026.111305_bb0145","doi-asserted-by":"crossref","first-page":"6451","DOI":"10.1016\/j.cell.2024.10.024","article-title":"Small and long non-coding RNAs: past, present, and future","volume":"187","author":"Chen","year":"2024","journal-title":"Cell"},{"issue":"41","key":"10.1016\/j.ygeno.2026.111305_bb0150","doi-asserted-by":"crossref","first-page":"25634","DOI":"10.1073\/pnas.2002277117","article-title":"A mouse tissue atlas of small noncoding RNA","volume":"117","author":"Isakova","year":"2020","journal-title":"Proc. Natl. Acad. Sci. USA"},{"issue":"9","key":"10.1016\/j.ygeno.2026.111305_bb0155","doi-asserted-by":"crossref","first-page":"2679","DOI":"10.1038\/s41591-024-03150-z","article-title":"A brain cell atlas integrating single-cell transcriptomes across human brain regions","volume":"30","author":"Chen","year":"2024","journal-title":"Nat. Med."},{"issue":"14","key":"10.1016\/j.ygeno.2026.111305_bb0160","doi-asserted-by":"crossref","first-page":"2140","DOI":"10.1016\/j.neuron.2023.04.031","article-title":"Non-coding RNA in the wiring and remodeling of neural circuits","volume":"111","author":"Soutschek","year":"2023","journal-title":"Neuron"},{"issue":"6","key":"10.1016\/j.ygeno.2026.111305_bb0165","doi-asserted-by":"crossref","first-page":"1224","DOI":"10.1016\/j.molcel.2020.04.030","article-title":"A mechanism for microRNA arm switching regulated by uridylation","volume":"78","author":"Kim","year":"2020","journal-title":"Mol. Cell"},{"issue":"6","key":"10.1016\/j.ygeno.2026.111305_bb0170","doi-asserted-by":"crossref","DOI":"10.1126\/sciadv.adf0597","article-title":"The integrator complex regulates microRNA abundance through RISC loading","volume":"9","author":"Kirstein","year":"2023","journal-title":"Sci. Adv."},{"key":"10.1016\/j.ygeno.2026.111305_bb0175","doi-asserted-by":"crossref","first-page":"37","DOI":"10.1016\/j.ebiom.2018.11.003","article-title":"miRNA arm switching identifies novel tumour biomarkers","volume":"38","author":"Chen","year":"2018","journal-title":"EBioMedicine"},{"issue":"1","key":"10.1016\/j.ygeno.2026.111305_bb0180","doi-asserted-by":"crossref","first-page":"197","DOI":"10.1007\/s00018-025-05663-3","article-title":"Decoding microRNA arm switching: a key to evolutionary innovation and gene regulation","volume":"82","author":"Pinhal","year":"2025","journal-title":"Cell. Mol. Life Sci."},{"key":"10.1016\/j.ygeno.2026.111305_bb0185","article-title":"MicroRNA transcriptomes reveal prevalence of rare and species-specific arm switching events during zebrafish ontogenesis","volume":"20","author":"dO","year":"2024","journal-title":"Evol. Bioinformatics Online"},{"key":"10.1016\/j.ygeno.2026.111305_bb0190","doi-asserted-by":"crossref","DOI":"10.1016\/j.redox.2021.102182","article-title":"MicroRNA-455-3p improves synaptic, cognitive functions and extends lifespan: relevance to Alzheimer\u2019s disease","volume":"48","author":"Kumar","year":"2021","journal-title":"Redox Biol."},{"issue":"1","key":"10.1016\/j.ygeno.2026.111305_bb0195","doi-asserted-by":"crossref","first-page":"554","DOI":"10.3390\/ijms23010554","article-title":"The microRNA-455 null mouse has memory deficit and increased anxiety, targeting key genes involved in Alzheimer\u2019s disease","volume":"23","author":"Swingler","year":"2022","journal-title":"Int. J. Mol. Sci."},{"issue":"12","key":"10.1016\/j.ygeno.2026.111305_bb0200","doi-asserted-by":"crossref","first-page":"1523","DOI":"10.1016\/j.bbalip.2018.09.004","article-title":"Transcriptomic and microRNA analyses of gene networks regulated by eicosapentaenoic acid in brown adipose tissue of diet-induced obese mice","volume":"1863","author":"Pahlavani","year":"2018","journal-title":"Biochim. Biophys. Acta Mol. Cell Biol. Lipids"},{"issue":"18","key":"10.1016\/j.ygeno.2026.111305_bb0205","doi-asserted-by":"crossref","DOI":"10.1002\/adhm.202304194","article-title":"Engineered hsa-miR-455-3p-abundant extracellular vesicles derived from 3D-cultured adipose mesenchymal stem cells for tissue-engineering hyaline cartilage regeneration","volume":"13","author":"Chen","year":"2024","journal-title":"Adv. Healthc. Mater."},{"issue":"1","key":"10.1016\/j.ygeno.2026.111305_bb0210","doi-asserted-by":"crossref","first-page":"10924","DOI":"10.1038\/s41598-024-61673-4","article-title":"SNPs in microRNA seed region and impact of miR-375 in concurrent regulation of multiple lipid accumulation-related genes","volume":"14","author":"Lee","year":"2024","journal-title":"Sci. Rep."},{"key":"10.1016\/j.ygeno.2026.111305_bb0215","doi-asserted-by":"crossref","first-page":"41158","DOI":"10.1038\/srep41158","article-title":"Comparison of amino acid profiles and metabolic gene expression in muskrat scented glands in secretion and non-secretion season","volume":"7","author":"Li","year":"2017","journal-title":"Sci. Rep."}],"container-title":["Genomics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0888754326001138?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0888754326001138?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,9,9]],"date-time":"2026-09-09T15:05:57Z","timestamp":1788966357000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0888754326001138"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,9]]},"references-count":43,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2026,9]]}},"alternative-id":["S0888754326001138"],"URL":"https:\/\/doi.org\/10.1016\/j.ygeno.2026.111305","relation":{},"ISSN":["0888-7543"],"issn-type":[{"value":"0888-7543","type":"print"}],"subject":[],"published":{"date-parts":[[2026,9]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"A muskrat tissue atlas of small non-coding RNAs and their regulatory roles in muskrat musk secretion","name":"articletitle","label":"Article Title"},{"value":"Genomics","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ygeno.2026.111305","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 The Authors. Published by Elsevier Inc.","name":"copyright","label":"Copyright"}],"article-number":"111305"}}