{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,5]],"date-time":"2026-10-05T21:49:19Z","timestamp":1791236959045,"version":"4.1.0"},"reference-count":57,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2015,11,1]],"date-time":"2015-11-01T00:00:00Z","timestamp":1446336000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"}],"funder":[{"DOI":"10.13039\/100006920","name":"University of Pennsylvania","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100006920","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"NIH","doi-asserted-by":"publisher","award":["CA 0970930"],"award-info":[{"award-number":["CA 0970930"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"NIH","doi-asserted-by":"publisher","award":["AI118891"],"award-info":[{"award-number":["AI118891"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000002","name":"NIH","doi-asserted-by":"publisher","award":["GM110174"],"award-info":[{"award-number":["GM110174"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Methods"],"published-print":{"date-parts":[[2015,11]]},"DOI":"10.1016\/j.ymeth.2015.06.008","type":"journal-article","created":{"date-parts":[[2015,6,18]],"date-time":"2015-06-18T02:41:33Z","timestamp":1434595293000},"page":"8-20","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":26,"special_numbering":"C","title":["Characterization of histone post-translational modifications during virus infection using mass spectrometry-based proteomics"],"prefix":"10.1016","volume":"90","author":[{"given":"Katarzyna","family":"Kulej","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Daphne C.","family":"Avgousti","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Matthew D.","family":"Weitzman","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Benjamin A.","family":"Garcia","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"78","reference":[{"key":"10.1016\/j.ymeth.2015.06.008_b0005","doi-asserted-by":"crossref","DOI":"10.1016\/j.cell.2014.09.037","volume":"159","author":"Huang","year":"2014","journal-title":"Cell"},{"key":"10.1016\/j.ymeth.2015.06.008_b0010","doi-asserted-by":"crossref","first-page":"693","DOI":"10.1016\/j.cell.2007.02.005","volume":"128","author":"Kouzarides","year":"2007","journal-title":"Cell"},{"key":"10.1016\/j.ymeth.2015.06.008_b0015","doi-asserted-by":"crossref","first-page":"243","DOI":"10.1146\/annurev.biochem.75.103004.142422","volume":"75","author":"Shilatifard","year":"2006","journal-title":"Annu. Rev. Biochem."},{"key":"10.1016\/j.ymeth.2015.06.008_b0020","doi-asserted-by":"crossref","first-page":"689","DOI":"10.1016\/j.molcel.2010.11.031","volume":"40","author":"Smith","year":"2010","journal-title":"Mol. Cell"},{"key":"10.1016\/j.ymeth.2015.06.008_b0025","doi-asserted-by":"crossref","first-page":"245","DOI":"10.1146\/annurev.biochem.78.071107.134639","volume":"78","author":"Rando","year":"2009","journal-title":"Annu. Rev. Biochem."},{"key":"10.1016\/j.ymeth.2015.06.008_b0030","doi-asserted-by":"crossref","first-page":"1828","DOI":"10.1038\/emboj.2009.180","volume":"28","author":"Corpet","year":"2009","journal-title":"EMBO J."},{"key":"10.1016\/j.ymeth.2015.06.008_b0035","doi-asserted-by":"crossref","first-page":"409","DOI":"10.1101\/gad.2021311","volume":"25","author":"Polo","year":"2011","journal-title":"Genes Dev."},{"key":"10.1016\/j.ymeth.2015.06.008_b0040","doi-asserted-by":"crossref","first-page":"3688","DOI":"10.4161\/cc.8.22.9908","volume":"8","author":"Xu","year":"2009","journal-title":"Cell Cycle"},{"key":"10.1016\/j.ymeth.2015.06.008_b0045","doi-asserted-by":"crossref","first-page":"1057","DOI":"10.1038\/nbt.1685","volume":"28","author":"Portela","year":"2010","journal-title":"Nat. Biotechnol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0050","doi-asserted-by":"crossref","first-page":"457","DOI":"10.1038\/nrc2876","volume":"10","author":"Chi","year":"2010","journal-title":"Nat. Rev. Cancer"},{"key":"10.1016\/j.ymeth.2015.06.008_b0055","doi-asserted-by":"crossref","first-page":"2399","DOI":"10.1074\/mcp.M114.039792","volume":"13","author":"O\u2019Connor","year":"2014","journal-title":"Mol. Cell. Proteomics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0060","doi-asserted-by":"crossref","first-page":"e1000965","DOI":"10.1371\/journal.ppat.1000965","volume":"6","author":"Terhune","year":"2010","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.ymeth.2015.06.008_b0065","doi-asserted-by":"crossref","first-page":"2226","DOI":"10.1002\/pmic.201400116","volume":"14","author":"Britton","year":"2014","journal-title":"Proteomics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0070","doi-asserted-by":"crossref","first-page":"6701","DOI":"10.1128\/JVI.00380-12","volume":"86","author":"Komatsu","year":"2012","journal-title":"J. Virol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0075","doi-asserted-by":"crossref","first-page":"141","DOI":"10.1016\/j.virol.2012.09.023","volume":"435","author":"Knipe","year":"2013","journal-title":"Virology"},{"key":"10.1016\/j.ymeth.2015.06.008_b0080","doi-asserted-by":"crossref","first-page":"1500","DOI":"10.3390\/v5061500","volume":"5","author":"Wong","year":"2013","journal-title":"Viruses"},{"key":"10.1016\/j.ymeth.2015.06.008_b0085","doi-asserted-by":"crossref","first-page":"1416","DOI":"10.1128\/JVI.01276-08","volume":"83","author":"Placek","year":"2009","journal-title":"J. Virol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0090","doi-asserted-by":"crossref","first-page":"863","DOI":"10.1038\/nrmicro3135","volume":"11","author":"Lieberman","year":"2013","journal-title":"Nat. Rev. Microbiol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0095","doi-asserted-by":"crossref","first-page":"597","DOI":"10.1016\/j.chom.2012.05.005","volume":"11","author":"Fonseca","year":"2012","journal-title":"Cell Host Microbe"},{"key":"10.1016\/j.ymeth.2015.06.008_b0100","doi-asserted-by":"crossref","first-page":"e1003411","DOI":"10.1371\/journal.ppat.1003411","volume":"9","author":"Fonseca","year":"2013","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.ymeth.2015.06.008_b0105","doi-asserted-by":"crossref","first-page":"79","DOI":"10.1016\/j.molcel.2012.02.004","volume":"46","author":"Chaurushiya","year":"2012","journal-title":"Mol. Cell"},{"key":"10.1016\/j.ymeth.2015.06.008_b0110","doi-asserted-by":"crossref","first-page":"1084","DOI":"10.1126\/science.1155544","volume":"321","author":"Horwitz","year":"2008","journal-title":"Science"},{"key":"10.1016\/j.ymeth.2015.06.008_b0115","doi-asserted-by":"crossref","first-page":"1086","DOI":"10.1126\/science.1155546","volume":"321","author":"Ferrari","year":"2008","journal-title":"Science"},{"key":"10.1016\/j.ymeth.2015.06.008_b0120","doi-asserted-by":"crossref","first-page":"3983","DOI":"10.1007\/s00018-010-0475-7","volume":"67","author":"Young","year":"2010","journal-title":"Cell. Mol. Life Sci."},{"key":"10.1016\/j.ymeth.2015.06.008_b0125","doi-asserted-by":"crossref","first-page":"3419","DOI":"10.1016\/j.jprot.2011.12.029","volume":"75","author":"Sidoli","year":"2012","journal-title":"J. Proteomics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0130","doi-asserted-by":"crossref","first-page":"3935","DOI":"10.1021\/ac0498617","volume":"76","author":"Pinkse","year":"2004","journal-title":"Anal. Chem."},{"key":"10.1016\/j.ymeth.2015.06.008_b0135","doi-asserted-by":"crossref","first-page":"1313","DOI":"10.2116\/analsci.20.1313","volume":"20","author":"Kuroda","year":"2004","journal-title":"Anal. Sci."},{"key":"10.1016\/j.ymeth.2015.06.008_b0140","doi-asserted-by":"crossref","first-page":"873","DOI":"10.1074\/mcp.T500007-MCP200","volume":"4","author":"Larsen","year":"2005","journal-title":"Mol. Cell. Proteomics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0145","doi-asserted-by":"crossref","first-page":"1017","DOI":"10.1007\/s00216-007-1486-6","volume":"389","author":"Bantscheff","year":"2007","journal-title":"Anal. Bioanal. Chem."},{"key":"10.1016\/j.ymeth.2015.06.008_b0150","doi-asserted-by":"crossref","first-page":"376","DOI":"10.1074\/mcp.M200025-MCP200","volume":"1","author":"Ong","year":"2002","journal-title":"Mol. Cell. Proteomics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0155","doi-asserted-by":"crossref","first-page":"1445","DOI":"10.1038\/nprot.2007.202","volume":"2","author":"Shechter","year":"2007","journal-title":"Nat. Protoc."},{"key":"10.1016\/j.ymeth.2015.06.008_b0160","doi-asserted-by":"crossref","first-page":"295","DOI":"10.1007\/978-1-62703-706-8_23","volume":"1094","author":"Rodriguez-Collazo","year":"2014","journal-title":"Methods Mol. Biol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0165","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1016\/B978-0-12-391940-3.00001-9","volume":"512","author":"Lin","year":"2012","journal-title":"Methods Enzymol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0170","doi-asserted-by":"crossref","first-page":"933","DOI":"10.1038\/nprot.2007.106","volume":"2","author":"Garcia","year":"2007","journal-title":"Nat. Protoc."},{"key":"10.1016\/j.ymeth.2015.06.008_b0175","doi-asserted-by":"crossref","first-page":"5749","DOI":"10.1016\/j.jprot.2012.08.007","volume":"75","author":"Engholm-Keller","year":"2012","journal-title":"J. Proteomics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0180","author":"Sidoli","year":"2015","journal-title":"Mol. Cell. Proteomics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0185","doi-asserted-by":"crossref","first-page":"966","DOI":"10.1093\/bioinformatics\/btq054","volume":"26","author":"MacLean","year":"2010","journal-title":"Bioinformatics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0190","doi-asserted-by":"crossref","first-page":"2450","DOI":"10.1074\/mcp.O113.036459","volume":"13","author":"Lin","year":"2014","journal-title":"Mol. Cell. Proteomics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0195","author":"Sidoli","year":"2015","journal-title":"Anal. Chem."},{"key":"10.1016\/j.ymeth.2015.06.008_b0200","author":"Yuan","year":"2015","journal-title":"Mol. Cell. Proteomics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0205","doi-asserted-by":"crossref","first-page":"1116","DOI":"10.1038\/nature04219","volume":"438","author":"Fischle","year":"2005","journal-title":"Nature"},{"key":"10.1016\/j.ymeth.2015.06.008_b0210","first-page":"711","volume":"2014","author":"Sawicka","year":"1839","journal-title":"Biochim. Biophys. Acta"},{"key":"10.1016\/j.ymeth.2015.06.008_b0215","doi-asserted-by":"crossref","first-page":"1098","DOI":"10.4161\/epi.21975","volume":"7","author":"Rossetto","year":"2012","journal-title":"Epigenetics"},{"key":"10.1016\/j.ymeth.2015.06.008_b0220","doi-asserted-by":"crossref","first-page":"114","DOI":"10.1002\/jcp.1041100203","volume":"110","author":"Cheetham","year":"1982","journal-title":"J. Cell. Physiol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0225","doi-asserted-by":"crossref","first-page":"330","DOI":"10.1006\/viro.1998.9102","volume":"244","author":"Grand","year":"1998","journal-title":"Virology"},{"key":"10.1016\/j.ymeth.2015.06.008_b0230","doi-asserted-by":"crossref","first-page":"7673","DOI":"10.1038\/sj.onc.1209040","volume":"24","author":"Berk","year":"2005","journal-title":"Oncogene"},{"key":"10.1016\/j.ymeth.2015.06.008_b0235","doi-asserted-by":"crossref","first-page":"93","DOI":"10.1016\/0968-0004(92)90243-3","volume":"17","author":"Roth","year":"1992","journal-title":"Trends Biochem. Sci."},{"key":"10.1016\/j.ymeth.2015.06.008_b0240","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1016\/j.gene.2008.11.003","volume":"431","author":"Happel","year":"2009","journal-title":"Gene"},{"key":"10.1016\/j.ymeth.2015.06.008_b0245","doi-asserted-by":"crossref","first-page":"35843","DOI":"10.1074\/jbc.M111.228064","volume":"286","author":"Chu","year":"2011","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.ymeth.2015.06.008_b0250","doi-asserted-by":"crossref","first-page":"12840","DOI":"10.1128\/JVI.79.20.12840-12851.2005","volume":"79","author":"Simpson-Holley","year":"2005","journal-title":"J. Virol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0255","doi-asserted-by":"crossref","first-page":"1230","DOI":"10.1038\/cr.2011.53","volume":"21","author":"Lee","year":"2011","journal-title":"Cell Res."},{"key":"10.1016\/j.ymeth.2015.06.008_b0260","doi-asserted-by":"crossref","first-page":"2376","DOI":"10.1021\/cr500491u","volume":"115","author":"Huang","year":"2015","journal-title":"Chem. Rev."},{"key":"10.1016\/j.ymeth.2015.06.008_b0265","doi-asserted-by":"crossref","first-page":"423","DOI":"10.1002\/rmv.551","volume":"17","author":"Bain","year":"2007","journal-title":"Rev. Med. Virol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0270","doi-asserted-by":"crossref","first-page":"59","DOI":"10.1186\/1742-4690-7-59","volume":"7","author":"Li","year":"2010","journal-title":"Retrovirology"},{"key":"10.1016\/j.ymeth.2015.06.008_b0275","doi-asserted-by":"crossref","first-page":"104","DOI":"10.1128\/JVI.78.1.104-115.2004","volume":"78","author":"Kudoh","year":"2004","journal-title":"J. Virol."},{"key":"10.1016\/j.ymeth.2015.06.008_b0280","series-title":"Fields Virology","author":"Knipe","year":"2013"},{"key":"10.1016\/j.ymeth.2015.06.008_b0285","doi-asserted-by":"crossref","first-page":"2797","DOI":"10.1093\/nar\/gkt012","volume":"41","author":"J\u00f8rgensen","year":"2013","journal-title":"Nucleic Acids Res."}],"container-title":["Methods"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1046202315002492?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1046202315002492?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2022,11,18]],"date-time":"2022-11-18T05:15:42Z","timestamp":1668748542000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1046202315002492"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,11]]},"references-count":57,"alternative-id":["S1046202315002492"],"URL":"https:\/\/doi.org\/10.1016\/j.ymeth.2015.06.008","relation":{},"ISSN":["1046-2023"],"issn-type":[{"value":"1046-2023","type":"print"}],"subject":[],"published":{"date-parts":[[2015,11]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Characterization of histone post-translational modifications during virus infection using mass spectrometry-based proteomics","name":"articletitle","label":"Article Title"},{"value":"Methods","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.ymeth.2015.06.008","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"Copyright \u00a9 2015 Elsevier Inc. All rights reserved.","name":"copyright","label":"Copyright"}]}}