{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,1]],"date-time":"2026-02-01T15:46:16Z","timestamp":1769960776216,"version":"3.49.0"},"reference-count":113,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2026,2,1]],"date-time":"2026-02-01T00:00:00Z","timestamp":1769904000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2026,2,1]],"date-time":"2026-02-01T00:00:00Z","timestamp":1769904000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2026,1,30]],"date-time":"2026-01-30T00:00:00Z","timestamp":1769731200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001871","name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","doi-asserted-by":"publisher","award":["UIDB\/04326\/2020"],"award-info":[{"award-number":["UIDB\/04326\/2020"]}],"id":[{"id":"10.13039\/501100001871","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001871","name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","doi-asserted-by":"publisher","award":["UIDP\/04326\/2020"],"award-info":[{"award-number":["UIDP\/04326\/2020"]}],"id":[{"id":"10.13039\/501100001871","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001871","name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","doi-asserted-by":"publisher","award":["CEECINST\/00114\/2018"],"award-info":[{"award-number":["CEECINST\/00114\/2018"]}],"id":[{"id":"10.13039\/501100001871","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100019778","name":"President's Malaria Initiative","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100019778","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100018329","name":"AiF Projekt GmbH","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100018329","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Aquaculture"],"published-print":{"date-parts":[[2026,2]]},"DOI":"10.1016\/j.aquaculture.2025.743369","type":"journal-article","created":{"date-parts":[[2025,10,30]],"date-time":"2025-10-30T00:52:54Z","timestamp":1761785574000},"page":"743369","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":0,"special_numbering":"P1","title":["Safe applications of ozone in tropical marine RAS: Determining impacts of elevated total residual oxidants (TRO) on Stylophora pistillata and Xenia sp. holobionts"],"prefix":"10.1016","volume":"613","author":[{"given":"Sabine","family":"Weidlich","sequence":"first","affiliation":[]},{"given":"Sabine","family":"Keuter","sequence":"additional","affiliation":[]},{"given":"Tania","family":"Aires","sequence":"additional","affiliation":[]},{"given":"Aschwin","family":"Engelen","sequence":"additional","affiliation":[]},{"given":"Andreas","family":"Kunzmann","sequence":"additional","affiliation":[]}],"member":"78","reference":[{"key":"10.1016\/j.aquaculture.2025.743369_bb0005","doi-asserted-by":"crossref","DOI":"10.1016\/j.aquaculture.2021.737846","article-title":"Microbiome response to foam fractionation and ozonation in RAS","volume":"550","author":"Aalto","year":"2022","journal-title":"Aquaculture"},{"issue":"12","key":"10.1016\/j.aquaculture.2025.743369_bb0010","doi-asserted-by":"crossref","first-page":"980","DOI":"10.1016\/j.tim.2017.06.007","article-title":"The other microeukaryotes of the coral reef microbiome","volume":"25","author":"Ainsworth","year":"2017","journal-title":"Trends Microbiol."},{"issue":"3","key":"10.1016\/j.aquaculture.2025.743369_bb0015","doi-asserted-by":"crossref","first-page":"255","DOI":"10.3354\/dao071255","article-title":"Tenacibaculosis infection in marine fish caused by Tenacibaculum maritimum: a review","volume":"71","author":"Avenda\u00f1o-Herrera","year":"2006","journal-title":"Dis. Aquat. Org."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0020","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/s41467-021-25950-4","article-title":"Elucidating gene expression adaptation of phylogenetically divergent coral holobionts under heat stress","volume":"12","author":"Avila-Maga\u00f1a","year":"2021","journal-title":"Nat. Commun."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0025","doi-asserted-by":"crossref","first-page":"26","DOI":"10.1016\/j.aquaeng.2012.07.004","article-title":"Recirculating aquaculture systems (RAS) analysis: Main issues on management and future challenges","volume":"51","author":"Badiola","year":"2012","journal-title":"Aquac. Eng."},{"issue":"3","key":"10.1016\/j.aquaculture.2025.743369_bb0030","doi-asserted-by":"crossref","first-page":"1166","DOI":"10.1111\/1462-2920.15718","article-title":"Microbial bioindicators of stony coral tissue loss disease identified in corals and overlying waters using a rapid field-based sequencing approach","volume":"24","author":"Becker","year":"2022","journal-title":"Environ. Microbiol."},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0035","doi-asserted-by":"crossref","first-page":"181","DOI":"10.1016\/S0022-0981(03)00121-7","article-title":"Comparison of stress susceptibility of in hospite and isolated zooxanthellae among five coral species","volume":"291","author":"Bhagooli","year":"2003","journal-title":"J. Exp. Mar. Biol. Ecol."},{"issue":"C","key":"10.1016\/j.aquaculture.2025.743369_bb0040","doi-asserted-by":"crossref","first-page":"299","DOI":"10.1016\/S0076-6879(84)05038-2","article-title":"Comparative studies on different methods of malonaldehyde determination","volume":"105","author":"Bird","year":"1984","journal-title":"Methods Enzymol."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0045","doi-asserted-by":"crossref","DOI":"10.1186\/s40168-018-0470-z","article-title":"Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2\u2019s q2-feature-classifier plugin","volume":"6","author":"Bokulich","year":"2018","journal-title":"Microbiome"},{"issue":"8","key":"10.1016\/j.aquaculture.2025.743369_bb0050","doi-asserted-by":"crossref","first-page":"852","DOI":"10.1038\/s41587-019-0209-9","article-title":"Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2","volume":"37","author":"Bolyen","year":"2019","journal-title":"Nat. Biotechnol."},{"issue":"1\u20132","key":"10.1016\/j.aquaculture.2025.743369_bb0055","doi-asserted-by":"crossref","first-page":"248","DOI":"10.1016\/0003-2697(76)90527-3","article-title":"A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding","volume":"72","author":"Bradford","year":"1976","journal-title":"Anal. Biochem."},{"issue":"31","key":"10.1016\/j.aquaculture.2025.743369_bb0060","doi-asserted-by":"crossref","first-page":"221","DOI":"10.1016\/S0065-2881(08)60224-2","article-title":"Adaptations of reef corals to physical environmental stress","volume":"31","author":"Brown","year":"1997","journal-title":"Adv. Mar. Biol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0065","doi-asserted-by":"crossref","first-page":"291","DOI":"10.3354\/meps296291","article-title":"Perspectives on mucus secretion in reef corals","volume":"296","author":"Brown","year":"2005","journal-title":"Mar. Ecol. Prog. Ser."},{"issue":"3","key":"10.1016\/j.aquaculture.2025.743369_bb0070","doi-asserted-by":"crossref","first-page":"225","DOI":"10.1016\/j.aquaeng.2005.02.002","article-title":"Measurement of dissolved ozone in sea water: a comparison of methods","volume":"33","author":"Buchan","year":"2005","journal-title":"Aquac. Eng."},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0075","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1080\/08997659.2017.1290711","article-title":"Biofilm formation on aquaculture substrates by selected bacterial fish pathogens","volume":"29","author":"Cai","year":"2017","journal-title":"J. Aquat. Anim. Health"},{"issue":"7","key":"10.1016\/j.aquaculture.2025.743369_bb0080","doi-asserted-by":"crossref","first-page":"581","DOI":"10.1038\/nmeth.3869","article-title":"DADA2: high-resolution sample inference from Illumina amplicon data","volume":"13","author":"Callahan","year":"2016","journal-title":"Nat. Methods"},{"issue":"8","key":"10.1016\/j.aquaculture.2025.743369_bb0085","doi-asserted-by":"crossref","first-page":"1621","DOI":"10.1038\/ismej.2012.8","article-title":"Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms","volume":"6","author":"Caporaso","year":"2012","journal-title":"ISME J."},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0090","doi-asserted-by":"crossref","first-page":"645","DOI":"10.1111\/1462-2920.13991","article-title":"Inhibiting bacterial quorum sensing arrests coral disease development and disease-associated microbes","volume":"20","author":"Certner","year":"2018","journal-title":"Environ. Microbiol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0095","doi-asserted-by":"crossref","DOI":"10.1016\/j.scitotenv.2022.154234","article-title":"Impact of polyethylene microplastics on coral Goniopora columna causing oxidative stress and histopathology damages","volume":"828","author":"Chen","year":"2022","journal-title":"Sci. Total Environ."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0100","series-title":"CRC Handbook of Methods for Oxygen Radical Research","first-page":"283","article-title":"Catalase activity","author":"Claiborne","year":"1985"},{"issue":"JUN","key":"10.1016\/j.aquaculture.2025.743369_bb0105","article-title":"Long term photoacclimation responses of the coral Stylophora pistillata to reciprocal deep to shallow transplantation: photosynthesis and calcification","volume":"2","author":"Cohen","year":"2015","journal-title":"Front. Mar. Sci."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0110","doi-asserted-by":"crossref","first-page":"64","DOI":"10.1002\/mbo3.52","article-title":"Phage therapy treatment of the coral pathogen Vibrio coralliilyticus","volume":"2","author":"Cohen","year":"2012","journal-title":"MicrobiologyOpen"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0115","article-title":"Species-specific oxidative stress responses and cellular energy allocation after coral shipping","volume":"19","author":"Costa","year":"2021","journal-title":"Aquac. Rep."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0120","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/s42003-024-06135-3","article-title":"Probiotics reshape the coral microbiome in situ without detectable off-target effects in the surrounding environment","volume":"7","author":"Delgadillo-Ordo\u00f1ez","year":"2024","journal-title":"Commun. Biol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0125","doi-asserted-by":"crossref","DOI":"10.1016\/j.marenvres.2019.104758","article-title":"Long-term exposure to increasing temperatures on scleractinian coral fragments reveals oxidative stress","volume":"150","author":"Dias","year":"2019","journal-title":"Mar. Environ. Res."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0130","doi-asserted-by":"crossref","DOI":"10.1016\/j.ecolind.2019.105586","article-title":"Oxidative stress on scleractinian coral fragments following exposure to high temperature and low salinity","volume":"107","author":"Dias","year":"2019","journal-title":"Ecol. Indic."},{"issue":"6","key":"10.1016\/j.aquaculture.2025.743369_bb0135","doi-asserted-by":"crossref","first-page":"533","DOI":"10.1007\/s101260000038","article-title":"A molecular biomarker system for assessing the health of coral (Montastraea faveolata) during heat stress","volume":"2","author":"Downs","year":"2000","journal-title":"Mar. Biotechnol."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0140","doi-asserted-by":"crossref","first-page":"7","DOI":"10.1007\/s00338-006-0170-1","article-title":"Phage therapy of coral disease","volume":"26","author":"Efrony","year":"2007","journal-title":"Coral Reefs"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0145","series-title":"Center for Tropical and Subtropical Aquaculture Publication Number","article-title":"Farming soft corals for the marine aquarium trade","volume":"140","author":"Ellis","year":"1999"},{"issue":"8","key":"10.1016\/j.aquaculture.2025.743369_bb0155","doi-asserted-by":"crossref","first-page":"1233","DOI":"10.4014\/jmb.1801.01056","article-title":"Inactivation of Vibrio parahaemolyticus by aqueous ozone","volume":"28","author":"Feng","year":"2018","journal-title":"J. Microbiol. Biotechnol."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0160","first-page":"76","article-title":"Effects of temperature and UV radiation increases on the photosynthetic efficiency in four scleractinian coral species","volume":"213","author":"Ferrier-Pag\u00e8s","year":"2007"},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0165","doi-asserted-by":"crossref","first-page":"118","DOI":"10.1016\/j.jembe.2010.05.007","article-title":"Experimental assessment of the feeding effort of three scleractinian coral species during a thermal stress: effect on the rates of photosynthesis","volume":"390","author":"Ferrier-Pag\u00e8s","year":"2010","journal-title":"J. Exp. Mar. Biol. Ecol."},{"key":"10.1016\/j.aquaculture.2025.743369_bib583","series-title":"An R Companion to Applied Regression","author":"Fox","year":"2019"},{"issue":"8","key":"10.1016\/j.aquaculture.2025.743369_bb0170","doi-asserted-by":"crossref","first-page":"1247","DOI":"10.1111\/jfd.12818","article-title":"Experimental induction of mouthrot in Atlantic salmon smolts using Tenacibaculum maritimum from Western Canada","volume":"41","author":"Frisch","year":"2018","journal-title":"J. Fish Dis."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0175","doi-asserted-by":"crossref","DOI":"10.3389\/fgene.2021.706907","article-title":"ggVennDiagram: an intuitive, easy-to-use, and highly customizable R package to generate Venn diagram","volume":"12","author":"Gao","year":"2021","journal-title":"Front. Genet."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0180","doi-asserted-by":"crossref","first-page":"117","DOI":"10.1186\/s12915-017-0459-2","article-title":"A multi-trait systems approach reveals a response cascade to bleaching in corals","volume":"15","author":"Gardner","year":"2017","journal-title":"BMC Biol."},{"issue":"8","key":"10.1016\/j.aquaculture.2025.743369_bb0185","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0134416","article-title":"Identification of candidate coral pathogens on white band disease-infected staghorn coral","volume":"10","author":"Gignoux-Wolfsohn","year":"2015","journal-title":"PLoS One"},{"issue":"9","key":"10.1016\/j.aquaculture.2025.743369_bb0190","doi-asserted-by":"crossref","first-page":"2280","DOI":"10.1038\/ismej.2016.9","article-title":"The microbiome of coral surface mucus has a key role in mediating holobiont health and survival upon disturbance","volume":"10","author":"Glasl","year":"2016","journal-title":"ISME J."},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0195","doi-asserted-by":"crossref","first-page":"89","DOI":"10.3354\/dao039089","article-title":"Surface disinfection of Atlantic halibut Hippoglossus hippoglossus eggs with ozonated sea-water inactivates nodavirus and increases survival of the larvae","volume":"39","author":"Grotmol","year":"2000","journal-title":"Dis. Aquat. Org."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0200","doi-asserted-by":"crossref","first-page":"68","DOI":"10.1016\/j.cbpc.2019.02.001","article-title":"DNA and chromosomal damage in Senegalese sole (Solea senegalensis) as side effects of ozone-based water treatment - contribution to optimization of fish-farming practices","volume":"219","author":"Guilherme","year":"2019","journal-title":"Comp. Biochem. Physiol. Part C Toxicol. Pharmacol."},{"issue":"8391","key":"10.1016\/j.aquaculture.2025.743369_bb0205","doi-asserted-by":"crossref","first-page":"1396","DOI":"10.1016\/S0140-6736(84)91886-5","article-title":"Lipid peroxidation, oxygen radicals, cell damage, and antioxidant therapy","volume":"323","author":"Halliwell","year":"1984","journal-title":"Lancet"},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0210","doi-asserted-by":"crossref","first-page":"125","DOI":"10.1016\/j.tim.2016.11.003","article-title":"Defining the Core microbiome in corals\u2019 microbial soup","volume":"25","author":"Hernandez-Agreda","year":"2017","journal-title":"Trends Microbiol."},{"key":"10.1016\/j.aquaculture.2025.743369_bib586","author":"Higuchi"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0230","series-title":"R Package Version 0.7.2","article-title":"Rstatix: pipe-friendly framework for basic statistical tests","author":"Kassambara","year":"2023"},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0235","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s40168-021-01031-y","article-title":"Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals","volume":"9","author":"Keller-Costa","year":"2021","journal-title":"Microbiome"},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0240","doi-asserted-by":"crossref","first-page":"106","DOI":"10.1111\/j.1574-6968.2007.00921.x","article-title":"Coral mucus-associated bacterial communities from natural and aquarium environments","volume":"276","author":"Kooperman","year":"2007","journal-title":"FEMS Microbiol. Lett."},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0245","doi-asserted-by":"crossref","first-page":"136","DOI":"10.1111\/raq.12087","article-title":"Coral aquaculture: applying scientific knowledge to ex situ production","volume":"8","author":"Leal","year":"2016","journal-title":"Rev. Aquac."},{"key":"10.1016\/j.aquaculture.2025.743369_bib585","doi-asserted-by":"crossref","first-page":"253","DOI":"10.1146\/annurev.physiol.68.040104.110001","article-title":"Oxidative stress in marine environments: biochemistry and physiological ecology","volume":"68","author":"Lesser","year":"2006","journal-title":"Annual Rev. Physiol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0250","series-title":"The Impact of Spectral Composition and Light Periodicity on the Activity of Two Antioxidant Enzymes (SOD and CAT) in the coral Favia favus","author":"Levy","year":"2006"},{"issue":"4","key":"10.1016\/j.aquaculture.2025.743369_bb0255","doi-asserted-by":"crossref","first-page":"1263","DOI":"10.1007\/s10499-013-9745-3","article-title":"Effect of oxidation-reduction potential on performance of European sea bass (Dicentrarchus labrax) in recirculating aquaculture systems","volume":"22","author":"Li","year":"2014","journal-title":"Aquac. Int."},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0260","doi-asserted-by":"crossref","first-page":"826","DOI":"10.1111\/1462-2920.15168","article-title":"Microbial community and transcriptional responses to increased temperatures in coral Pocillopora damicornis holobiont","volume":"23","author":"Li","year":"2021","journal-title":"Environ. Microbiol."},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0265","doi-asserted-by":"crossref","first-page":"72","DOI":"10.1016\/j.aquaeng.2005.05.002","article-title":"High resistance of fish pathogenic viruses to UV irradiation and ozonated seawater","volume":"34","author":"Liltved","year":"2006","journal-title":"Aquac. Eng."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0275","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2023.1200997","article-title":"Microbiomes in the context of developing sustainable intensified aquaculture","volume":"14","author":"Lorgen-Ritchie","year":"2023","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.aquaculture.2025.743369_bib582","series-title":"emmeans: Estimated Marginal Means, aka Least-Squares Means (Version 1.11.1)","author":"Lenth","year":"2025"},{"issue":"12","key":"10.1016\/j.aquaculture.2025.743369_bib584","doi-asserted-by":"crossref","first-page":"550","DOI":"10.1186\/s13059-014-0550-8","article-title":"Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2","volume":"15","author":"Love","year":"2014","journal-title":"Genome Biol."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0280","doi-asserted-by":"crossref","first-page":"120","DOI":"10.1111\/j.1758-2229.2009.00114.x","article-title":"Vibrio harveyi as a causative agent of the white syndrome in tropical stony corals","volume":"2","author":"Luna","year":"2010","journal-title":"Environ. Microbiol. Rep."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0285","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/s42003-021-02163-5","article-title":"Microbial dysbiosis reflects disease resistance in diverse coral species","volume":"4","author":"MacKnight","year":"2021","journal-title":"Commun. Biol."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0295","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s40168-024-02006-5","article-title":"Destabilization of mutualistic interactions shapes the early heat stress response of the coral holobiont","volume":"13","author":"Marangon","year":"2025","journal-title":"Microbiome"},{"issue":"AUG","key":"10.1016\/j.aquaculture.2025.743369_bb0300","article-title":"Inactivation of foodborne Bacteria biofilms by aqueous and gaseous ozone","volume":"9","author":"Marino","year":"2018","journal-title":"Front. Microbiol."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0305","doi-asserted-by":"crossref","first-page":"10","DOI":"10.14806\/ej.17.1.200","article-title":"Cutadapt removes adapter sequences from high-throughput sequencing reads","volume":"17","author":"Martin","year":"2011","journal-title":"EMBnet. J."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0310","series-title":"pairwiseAdonis: Pairwise Multilevel Comparison using Adonis (R Package Version 0.4)","author":"Martinez Arbizu","year":"2020"},{"issue":"3","key":"10.1016\/j.aquaculture.2025.743369_bb0315","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1016\/j.aquaeng.2010.09.002","article-title":"New developments in recirculating aquaculture systems in Europe: a perspective on environmental sustainability","volume":"43","author":"Martins","year":"2010","journal-title":"Aquac. Eng."},{"issue":"22","key":"10.1016\/j.aquaculture.2025.743369_bb0320","doi-asserted-by":"crossref","first-page":"6049","DOI":"10.1016\/S0021-9258(18)63504-5","article-title":"Superoxide dismutase. An enzymic function for erythrocuprein (hemocuprein)","volume":"244","author":"McCord","year":"1969","journal-title":"J. Biol. Chem."},{"issue":"AUG","key":"10.1016\/j.aquaculture.2025.743369_bb0325","article-title":"Responses of coral-associated bacterial communities to local and global stressors","volume":"4","author":"McDevitt-Irwin","year":"2017","journal-title":"Front. Mar. Sci."},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0330","doi-asserted-by":"crossref","first-page":"331","DOI":"10.1007\/s00338-019-01779-8","article-title":"Variable interaction outcomes of local disturbance and El Ni\u00f1o-induced heat stress on coral microbiome alpha and beta diversity","volume":"38","author":"McDevitt-Irwin","year":"2019","journal-title":"Coral Reefs"},{"issue":"4","key":"10.1016\/j.aquaculture.2025.743369_bb0335","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0061217","article-title":"Phyloseq: an R package for reproducible interactive analysis and graphics of microbiome census data","volume":"8","author":"McMurdie","year":"2013","journal-title":"PLoS One"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0340","doi-asserted-by":"crossref","first-page":"2244","DOI":"10.3389\/fmicb.2019.02244","article-title":"Microbial community shifts associated with the ongoing stony coral tissue loss disease outbreak on the Florida reef tract","volume":"10","author":"Meyer","year":"2019","journal-title":"Front. Microbiol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0345","series-title":"Stylophora Under Stress: A Review of Research Trends and Impacts of Stressors on a Model Coral Species","author":"Meziere","year":"2021"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0350","series-title":"Current Knowledge of Coral Diseases Present within the Red Sea","first-page":"387","author":"Mohamed","year":"2019"},{"issue":"4","key":"10.1016\/j.aquaculture.2025.743369_bb0355","doi-asserted-by":"crossref","first-page":"1861","DOI":"10.1111\/raq.12677","article-title":"Prokaryotic diversity in marine and freshwater recirculating aquaculture systems","volume":"14","author":"Moschos","year":"2022","journal-title":"Rev. Aquac."},{"issue":"3","key":"10.1016\/j.aquaculture.2025.743369_bb0360","doi-asserted-by":"crossref","first-page":"695","DOI":"10.1128\/aem.59.3.695-700.1993","article-title":"Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA","volume":"59","author":"Muyzer","year":"1993","journal-title":"Appl. Environ. Microbiol."},{"issue":"8","key":"10.1016\/j.aquaculture.2025.743369_bb0365","doi-asserted-by":"crossref","first-page":"429","DOI":"10.47853\/FAS.2022.e39","article-title":"Effect of nanobubbles (oxygen, ozone) on the Pacific white shrimp (Penaeus vannamei), Vibrio parahaemolyticus and water quality under lab conditions","volume":"25","author":"Nghia","year":"2022","journal-title":"Fish. Aquat. Sci."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0370","series-title":"Simple Fisheries Stock Assessment Methods [R package FSA version 0.10.0]. CRAN: Contributed Packages","author":"Ogle","year":"2025"},{"issue":"2","key":"10.1016\/j.aquaculture.2025.743369_bb0375","doi-asserted-by":"crossref","first-page":"351","DOI":"10.1016\/0003-2697(79)90738-3","article-title":"Assay for lipid peroxides in animal tissues by thiobarbituric acid reaction","volume":"95","author":"Ohkawa","year":"1979","journal-title":"Anal. Biochem."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0380","author":"Oksanen"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0385","doi-asserted-by":"crossref","DOI":"10.1016\/j.jembe.2019.151222","article-title":"Compound effects of thermal stress and tissue abrasion on photosynthesis and respiration in the reef-building coral Acropora cervicornis (Lamarck, 1816)","volume":"521","author":"Paradis","year":"2019","journal-title":"J. Exp. Mar. Biol. Ecol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0390","author":"Pedersen"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0395","author":"Pedregosa"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0400","doi-asserted-by":"crossref","DOI":"10.1016\/j.jwpe.2021.102396","article-title":"Use of ozone for Vibrio parahaemolyticus inactivation alongside nitrification biofilter treatment in shrimp-rearing recirculating aquaculture system","volume":"44","author":"Pumkaew","year":"2021","journal-title":"J Water Process Eng"},{"issue":"D1","key":"10.1016\/j.aquaculture.2025.743369_bb0405","doi-asserted-by":"crossref","DOI":"10.1093\/nar\/gks1219","article-title":"The SILVA ribosomal RNA gene database project: improved data processing and web-based tools","volume":"41","author":"Quast","year":"2013","journal-title":"Nucleic Acids Res."},{"issue":"4","key":"10.1016\/j.aquaculture.2025.743369_bb0410","first-page":"348","article-title":"Induction of mixed-function oxygenase system and antioxidant enzymes in the coral Montastraea faveolata on acute exposure to benzo(a)pyrene","volume":"144","author":"Ramos","year":"2007","journal-title":"Comp. Biochem. Physiol. Part C: Toxicol. Pharmacol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0415","series-title":"Histological and Physiological Alterations in Juvenile Turbot (Psetta maxima, L.) Exposed to Sublethal Concentrations of Ozone-Produced Oxidants in Ozonated Seawater","author":"Reiser","year":"2010"},{"issue":"3\u20134","key":"10.1016\/j.aquaculture.2025.743369_bb0420","doi-asserted-by":"crossref","first-page":"219","DOI":"10.1016\/S0044-8486(99)00355-5","article-title":"Glutathione-dependent defence system and monooxygenase enzyme activities in Arctic charr Salvelinus alpinus (L.) exposed to ozone","volume":"185","author":"Ritola","year":"2000","journal-title":"Aquaculture"},{"issue":"3","key":"10.1016\/j.aquaculture.2025.743369_bb0425","doi-asserted-by":"crossref","first-page":"165","DOI":"10.1046\/j.1365-2109.2002.00649.x","article-title":"Effects of in vitro exposure to ozone and\/or hyperoxia on superoxide dismutase, catalase, glutathione and lipid peroxidation in red blood cells and plasma of rainbow trout, Oncorhynchus mykiss (Walbaum)","volume":"33","author":"Ritola","year":"2002","journal-title":"Aquac. Res."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0430","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/s41598-019-54855-y","article-title":"Microbiome differences in disease-resistant vs. susceptible Acropora corals subjected to disease challenge assays","volume":"9","author":"Rosales","year":"2019","journal-title":"Sci. Rep."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0435","doi-asserted-by":"crossref","DOI":"10.3389\/fmicb.2020.00681","article-title":"Rhodobacterales and Rhizobiales are associated with stony coral tissue loss disease and its suspected sources of transmission","volume":"11","author":"Rosales","year":"2020","journal-title":"Front. Microbiol."},{"issue":"6","key":"10.1016\/j.aquaculture.2025.743369_bb0440","doi-asserted-by":"crossref","first-page":"756","DOI":"10.1038\/ismej.2009.15","article-title":"Inter- and intra-habitat bacterial diversity associated with cold-water corals","volume":"3","author":"Sch\u00f6ttner","year":"2009","journal-title":"ISME J."},{"issue":"1\u20134","key":"10.1016\/j.aquaculture.2025.743369_bb0445","doi-asserted-by":"crossref","first-page":"6","DOI":"10.1016\/j.aquaculture.2010.03.030","article-title":"The toxicity of ozone-produced oxidants to the Pacific white shrimp Litopenaeus vannamei","volume":"305","author":"Schroeder","year":"2010","journal-title":"Aquaculture"},{"issue":"9","key":"10.1016\/j.aquaculture.2025.743369_bb0450","doi-asserted-by":"crossref","first-page":"5963","DOI":"10.1128\/AEM.00843-06","article-title":"Microbial communities in the surface mucopolysaccharide layer and the black band microbial mat of black band-diseased Siderastrea siderea","volume":"72","author":"Sekar","year":"2006","journal-title":"Appl. Environ. Microbiol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0455","series-title":"Handbook of Marine Model Organisms in Experimental Biology: Established and Emerging","first-page":"195","article-title":"Stylophora pistillata - a model colonial species in basic and applied studies","author":"Shefy","year":"2021"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0460","series-title":"Aquaculture","first-page":"124","article-title":"Diseases in coral aquaculture: causes, implications and preventions","volume":"Vols. 396\u2013399","author":"Sheridan","year":"2013"},{"issue":"12 December 2021","key":"10.1016\/j.aquaculture.2025.743369_bb0465","article-title":"Ozone ultrafine bubble water inhibits the early formation of Candida albicans biofilms","volume":"16","author":"Shichiri-Negoro","year":"2021","journal-title":"PLoS One"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0470","doi-asserted-by":"crossref","DOI":"10.7717\/peerj.11663","article-title":"Photosynthesis and respiration of the soft coral Xenia umbellata respond to warming but not to organic carbon eutrophication","volume":"9","author":"Simancas-Giraldo","year":"2021","journal-title":"PeerJ"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0475","doi-asserted-by":"crossref","DOI":"10.1016\/j.aquaculture.2020.736227","article-title":"The microbiome of Chinook salmon (Oncorhynchus tshawytscha) in a recirculation aquaculture system","volume":"534","author":"Steiner","year":"2021","journal-title":"Aquaculture"},{"issue":"1\u20132","key":"10.1016\/j.aquaculture.2025.743369_bb0480","doi-asserted-by":"crossref","first-page":"21","DOI":"10.1016\/S0144-8609(02)00069-9","article-title":"Ozonation and UV irradiation\u2014an introduction and examples of current applications","volume":"28","author":"Summerfelt","year":"2003","journal-title":"Aquac. Eng."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0485","article-title":"Divergent responses of the coral holobiont to deoxygenation and prior environmental stress","volume":"10","author":"Swaminathan","year":"2023","journal-title":"Front. Mar. Sci."},{"issue":"4","key":"10.1016\/j.aquaculture.2025.743369_bb0490","doi-asserted-by":"crossref","first-page":"791","DOI":"10.1017\/S0025315411001688","article-title":"Coral diseases in aquaria and in nature","volume":"92","author":"Sweet","year":"2012","journal-title":"J. Mar. Biol. Assoc. U. K."},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0495","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1186\/s40168-019-0759-6","article-title":"Compositional homogeneity in the pathobiome of a new, slow-spreading coral disease","volume":"7","author":"Sweet","year":"2019","journal-title":"Microbiome"},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0505","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1080\/01919510802586566","article-title":"Studies on the disinfection and removal of biofilms by ozone water using an artificial microbial biofilm system","volume":"31","author":"Tachikawa","year":"2009","journal-title":"Ozone Sci. Eng."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0510","doi-asserted-by":"crossref","first-page":"66","DOI":"10.1016\/j.envpol.2018.08.045","article-title":"Acute microplastic exposure raises stress response and suppresses detoxification and immune capacities in the scleractinian coral Pocillopora damicornis","volume":"243","author":"Tang","year":"2018","journal-title":"Environ. Pollut."},{"issue":"3\u20134","key":"10.1016\/j.aquaculture.2025.743369_bb0515","doi-asserted-by":"crossref","first-page":"125","DOI":"10.1016\/S0144-8609(03)00061-X","article-title":"Impact of ozonation on water quality in marine recirculation systems","volume":"29","author":"Tango","year":"2003","journal-title":"Aquac. Eng."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0520","doi-asserted-by":"crossref","first-page":"35","DOI":"10.1016\/j.jembe.2012.10.010","article-title":"Coral physiological adaptations to air exposure: heat shock and oxidative stress responses in Veretillum cynomorium","volume":"439","author":"Teixeira","year":"2013","journal-title":"J. Exp. Mar. Biol. Ecol."},{"issue":"8","key":"10.1016\/j.aquaculture.2025.743369_bb0525","doi-asserted-by":"crossref","first-page":"2148","DOI":"10.1111\/j.1462-2920.2009.01935.x","article-title":"Metagenomic analysis of stressed coral holobionts","volume":"11","author":"Thurber","year":"2009","journal-title":"Environ. Microbiol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0530","series-title":"Recirculating Aquaculture System","author":"Timmons","year":"2013"},{"issue":"1","key":"10.1016\/j.aquaculture.2025.743369_bb0535","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1038\/s42003-023-04590-y","article-title":"Chemical and genomic characterization of a potential probiotic treatment for stony coral tissue loss disease","volume":"6","author":"Ushijima","year":"2023","journal-title":"Commun. Biol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0540","series-title":"Modern Applied Statistics with S","author":"Venables","year":"2025"},{"issue":"8","key":"10.1016\/j.aquaculture.2025.743369_bb0545","doi-asserted-by":"crossref","first-page":"460","DOI":"10.1038\/s41579-024-01015-3","article-title":"The coral microbiome in sickness, in health and in a changing world","volume":"22","author":"Voolstra","year":"2024","journal-title":"Nat. Rev. Microbiol."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0550","series-title":"ggplot2: Elegant Graphics for Data Analysis","author":"Wickham","year":"2016"},{"key":"10.1016\/j.aquaculture.2025.743369_bb0555","series-title":"R Package Version 1.1.4","article-title":"Dplyr: a grammar of data manipulation","author":"Wickham","year":"2023"},{"key":"10.1016\/j.aquaculture.2025.743369_bib581","doi-asserted-by":"crossref","first-page":"266","DOI":"10.1016\/j.syapm.2009.04.001","article-title":"Effects of seawater ozonation on biofilm development in aquaculture tanks","volume":"32","author":"Wietz","year":"2009","journal-title":"Syst. Appl. Microbiol."},{"issue":"6978","key":"10.1016\/j.aquaculture.2025.743369_bb0560","doi-asserted-by":"crossref","first-page":"66","DOI":"10.1038\/nature02344","article-title":"Coral mucus functions as an energy carrier and particle trap in the reef ecosystem","volume":"428","author":"Wild","year":"2004","journal-title":"Nature"},{"issue":"4","key":"10.1016\/j.aquaculture.2025.743369_bb0570","doi-asserted-by":"crossref","first-page":"1388","DOI":"10.4319\/lo.2003.48.4.1388","article-title":"Photoinhibition in shallow-water colonies of the coral Stylophora pistillata as measured in situ","volume":"48","author":"Winters","year":"2003","journal-title":"Limnol. Oceanogr."},{"key":"10.1016\/j.aquaculture.2025.743369_bb0575","article-title":"Adverse effects of ozonation on the animal welfare of tilapia Oreochromis niloticus in recirculation aquaculture","volume":"32","author":"Wuertz","year":"2023","journal-title":"Aquac. Rep."}],"updated-by":[{"DOI":"10.1016\/j.aquaculture.2025.743444","type":"erratum","label":"Erratum","source":"publisher","updated":{"date-parts":[[2026,2,1]],"date-time":"2026-02-01T00:00:00Z","timestamp":1769904000000}}],"container-title":["Aquaculture"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0044848625012554?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S0044848625012554?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2026,1,31]],"date-time":"2026-01-31T14:02:42Z","timestamp":1769868162000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S0044848625012554"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,2]]},"references-count":113,"alternative-id":["S0044848625012554"],"URL":"https:\/\/doi.org\/10.1016\/j.aquaculture.2025.743369","relation":{},"ISSN":["0044-8486"],"issn-type":[{"value":"0044-8486","type":"print"}],"subject":[],"published":{"date-parts":[[2026,2]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"Safe applications of ozone in tropical marine RAS: Determining impacts of elevated total residual oxidants (TRO) on Stylophora pistillata and Xenia sp. holobionts","name":"articletitle","label":"Article Title"},{"value":"Aquaculture","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.aquaculture.2025.743369","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2026 The Authors. Published by Elsevier B.V.","name":"copyright","label":"Copyright"}],"article-number":"743369"}}