{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,7]],"date-time":"2026-02-07T13:07:22Z","timestamp":1770469642412,"version":"3.49.0"},"reference-count":174,"publisher":"Elsevier BV","license":[{"start":{"date-parts":[[2024,5,1]],"date-time":"2024-05-01T00:00:00Z","timestamp":1714521600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/tdm\/userlicense\/1.0\/"},{"start":{"date-parts":[[2024,5,1]],"date-time":"2024-05-01T00:00:00Z","timestamp":1714521600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.elsevier.com\/legal\/tdmrep-license"},{"start":{"date-parts":[[2024,10,3]],"date-time":"2024-10-03T00:00:00Z","timestamp":1727913600000},"content-version":"vor","delay-in-days":155,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["clinicalkey.fr","clinicalkey.jp","clinicalkey.es","clinicalkey.com.au","clinicalkey.com","elsevier.com","sciencedirect.com"],"crossmark-restriction":true},"short-container-title":["Seminars in Immunology"],"published-print":{"date-parts":[[2024,5]]},"DOI":"10.1016\/j.smim.2024.101891","type":"journal-article","created":{"date-parts":[[2024,10,10]],"date-time":"2024-10-10T02:35:02Z","timestamp":1728527702000},"page":"101891","update-policy":"https:\/\/doi.org\/10.1016\/elsevier_cm_policy","source":"Crossref","is-referenced-by-count":17,"special_numbering":"C","title":["The role of glycans in health and disease: Regulators of the interaction between gut microbiota and host immune system"],"prefix":"10.1016","volume":"73","author":[{"given":"Lucy I.","family":"Crouch","sequence":"first","affiliation":[]},{"given":"Cl\u00e1udia S.","family":"Rodrigues","sequence":"additional","affiliation":[]},{"given":"Cassie R.","family":"Bakshani","sequence":"additional","affiliation":[]},{"given":"Leticia","family":"Tavares-Gomes","sequence":"additional","affiliation":[]},{"given":"Joana","family":"Gaifem","sequence":"additional","affiliation":[]},{"given":"Salom\u00e9 S.","family":"Pinho","sequence":"additional","affiliation":[]}],"member":"78","reference":[{"key":"10.1016\/j.smim.2024.101891_bib1","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pbio.3000126","article-title":"Evolutionary change in the human gut microbiome: from a static to a dynamic view","volume":"17","author":"Gordo","year":"2019","journal-title":"PLoS Biol."},{"key":"10.1016\/j.smim.2024.101891_bib2","doi-asserted-by":"crossref","first-page":"590","DOI":"10.1038\/s41579-023-00890-6","article-title":"Intrahost evolution of the gut microbiota","volume":"21","author":"Barreto","year":"2023","journal-title":"Nat. Rev. Microbiol"},{"key":"10.1016\/j.smim.2024.101891_bib3","doi-asserted-by":"crossref","first-page":"569","DOI":"10.1038\/s41579-019-0222-5","article-title":"Scientists' warning to humanity: microorganisms and climate change","volume":"17","author":"Cavicchioli","year":"2019","journal-title":"Nat. Rev. Microbiol"},{"key":"10.1016\/j.smim.2024.101891_bib4","doi-asserted-by":"crossref","DOI":"10.1136\/gutjnl-2024-332523","article-title":"Emerging role of environmental pollutants in inflammatory bowel disease risk, outcomes and underlying mechanisms","author":"Estevinho","year":"2024","journal-title":"Gut"},{"key":"10.1016\/j.smim.2024.101891_bib5","doi-asserted-by":"crossref","DOI":"10.1016\/j.coi.2022.102266","article-title":"The increasing prevalence of autoimmunity and autoimmune diseases: an urgent call to action for improved understanding, diagnosis, treatment, and prevention","volume":"80","author":"Miller","year":"2023","journal-title":"Curr. Opin. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib6","doi-asserted-by":"crossref","first-page":"223","DOI":"10.1038\/s41575-019-0258-z","article-title":"Gut microbiota-derived metabolites as key actors in inflammatory bowel disease","volume":"17","author":"Lavelle","year":"2020","journal-title":"Nat. Rev. Gastroenterol. Hepatol."},{"key":"10.1016\/j.smim.2024.101891_bib7","doi-asserted-by":"crossref","first-page":"573","DOI":"10.1038\/nrgastro.2017.88","article-title":"Gut microbiota and IBD: causation or correlation?","volume":"14","author":"Ni","year":"2017","journal-title":"Nat. Rev. Gastroenterol. Hepatol."},{"key":"10.1016\/j.smim.2024.101891_bib8","doi-asserted-by":"crossref","first-page":"453","DOI":"10.1038\/nri3446","article-title":"The history of Toll-like receptors - redefining innate immunity","volume":"13","author":"O'Neill","year":"2013","journal-title":"Nat. Rev. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib9","doi-asserted-by":"crossref","first-page":"465","DOI":"10.1038\/nrd2783","article-title":"Unleashing the therapeutic potential of NOD-like receptors","volume":"8","author":"Geddes","year":"2009","journal-title":"Nat. Rev. Drug Discov."},{"key":"10.1016\/j.smim.2024.101891_bib10","doi-asserted-by":"crossref","first-page":"9","DOI":"10.1038\/nri3565","article-title":"NOD proteins: regulators of inflammation in health and disease","volume":"14","author":"Philpott","year":"2014","journal-title":"Nat. Rev. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib11","doi-asserted-by":"crossref","first-page":"1428","DOI":"10.1016\/j.cell.2015.10.048","article-title":"Microbiota-modulated metabolites shape the intestinal microenvironment by regulating NLRP6 inflammasome signaling","volume":"163","author":"Levy","year":"2015","journal-title":"Cell"},{"key":"10.1016\/j.smim.2024.101891_bib12","doi-asserted-by":"crossref","first-page":"1045","DOI":"10.1016\/j.cell.2014.01.026","article-title":"NLRP6 inflammasome orchestrates the colonic host-microbial interface by regulating goblet cell mucus secretion","volume":"156","author":"Wlodarska","year":"2014","journal-title":"Cell"},{"key":"10.1016\/j.smim.2024.101891_bib13","doi-asserted-by":"crossref","first-page":"745","DOI":"10.1016\/j.cell.2011.04.022","article-title":"NLRP6 inflammasome regulates colonic microbial ecology and risk for colitis","volume":"145","author":"Elinav","year":"2011","journal-title":"Cell"},{"key":"10.1016\/j.smim.2024.101891_bib14","doi-asserted-by":"crossref","DOI":"10.1016\/j.cgh.2024.05.049","article-title":"Diet and microbiome-directed therapy 2.0 for IBD","author":"Ananthakrishnan","year":"2024","journal-title":"Clin. Gastroenterol. Hepatol."},{"key":"10.1016\/j.smim.2024.101891_bib15","doi-asserted-by":"crossref","first-page":"1069","DOI":"10.1053\/j.gastro.2023.02.022","article-title":"The gut microbial bile acid modulation and its relevance to digestive health and diseases","volume":"164","author":"Fogelson","year":"2023","journal-title":"Gastroenterology"},{"key":"10.1016\/j.smim.2024.101891_bib16","doi-asserted-by":"crossref","first-page":"554","DOI":"10.3389\/fimmu.2015.00554","article-title":"Redirection of epithelial immune responses by short-chain fatty acids through inhibition of histone deacetylases","volume":"6","author":"Lin","year":"2015","journal-title":"Front Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib17","doi-asserted-by":"crossref","first-page":"569","DOI":"10.1126\/science.1241165","article-title":"The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis","volume":"341","author":"Smith","year":"2013","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib18","doi-asserted-by":"crossref","first-page":"517","DOI":"10.1016\/j.cmet.2011.02.018","article-title":"The microbiome and butyrate regulate energy metabolism and autophagy in the mammalian colon","volume":"13","author":"Donohoe","year":"2011","journal-title":"Cell Metab."},{"key":"10.1016\/j.smim.2024.101891_bib19","doi-asserted-by":"crossref","first-page":"53","DOI":"10.2174\/1874091X01004010053","article-title":"The impact of the level of the intestinal short chain Fatty acids in inflammatory bowel disease patients versus healthy subjects","volume":"4","author":"Huda-Faujan","year":"2010","journal-title":"Open Biochem J."},{"key":"10.1016\/j.smim.2024.101891_bib20","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1038\/s41586-019-1785-z","article-title":"Bile acid metabolites control T(H)17 and T(reg) cell differentiation.","volume":"576","author":"Hang","year":"2019","journal-title":"Nature"},{"key":"10.1016\/j.smim.2024.101891_bib21","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0176715","article-title":"Lithocholic acid controls adaptive immune responses by inhibition of Th1 activation through the Vitamin D receptor","volume":"12","author":"Pols","year":"2017","journal-title":"PLoS One"},{"key":"10.1016\/j.smim.2024.101891_bib22","doi-asserted-by":"crossref","first-page":"1101","DOI":"10.1038\/s41423-023-01074-1","article-title":"Immune regulatory networks coordinated by glycans and glycan-binding proteins in autoimmunity and infection","volume":"20","author":"Pinho","year":"2023","journal-title":"Cell Mol. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib23","doi-asserted-by":"crossref","first-page":"555","DOI":"10.1038\/35107092","article-title":"Extensive surface diversity of a commensal microorganism by multiple DNA inversions","volume":"414","author":"Krinos","year":"2001","journal-title":"Nature"},{"key":"10.1016\/j.smim.2024.101891_bib24","doi-asserted-by":"crossref","first-page":"25","DOI":"10.2741\/3603","article-title":"Beneficial effects of Bacteroides fragilis polysaccharides on the immune system","volume":"15","author":"Troy","year":"2010","journal-title":"Front Biosci. (Landmark Ed. )"},{"key":"10.1016\/j.smim.2024.101891_bib25","doi-asserted-by":"crossref","first-page":"6733","DOI":"10.1074\/jbc.275.10.6733","article-title":"T cells activated by zwitterionic molecules prevent abscesses induced by pathogenic bacteria","volume":"275","author":"Tzianabos","year":"2000","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.smim.2024.101891_bib26","doi-asserted-by":"crossref","first-page":"707","DOI":"10.1093\/glycob\/cwn050","article-title":"Characteristics of carbohydrate antigen binding to the presentation protein HLA-DR","volume":"18","author":"Cobb","year":"2008","journal-title":"Glycobiology"},{"key":"10.1016\/j.smim.2024.101891_bib27","doi-asserted-by":"crossref","first-page":"9365","DOI":"10.1073\/pnas.161175598","article-title":"Structural rationale for the modulation of abscess formation by Staphylococcus aureus capsular polysaccharides","volume":"98","author":"Tzianabos","year":"2001","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib28","doi-asserted-by":"crossref","first-page":"285","DOI":"10.1016\/0008-6215(90)84244-O","article-title":"Structure of the type 5 capsular polysaccharide of Staphylococcus aureus","volume":"201","author":"Moreau","year":"1990","journal-title":"Carbohydr. Res"},{"key":"10.1016\/j.smim.2024.101891_bib29","doi-asserted-by":"crossref","first-page":"1097","DOI":"10.1016\/j.carres.2005.02.001","article-title":"Revised structures for the capsular polysaccharides from Staphylococcus aureus Types 5 and 8, components of novel glycoconjugate vaccines","volume":"340","author":"Jones","year":"2005","journal-title":"Carbohydr. Res"},{"key":"10.1016\/j.smim.2024.101891_bib30","first-page":"129","article-title":"Targeting glycans on human pathogens for vaccine design","volume":"428","author":"Krumm","year":"2020","journal-title":"Curr. Top. Microbiol Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib31","doi-asserted-by":"crossref","DOI":"10.1128\/mBio.03115-20","article-title":"Hyaluronidase impairs neutrophil function and promotes group b streptococcus invasion and preterm labor in nonhuman primates","volume":"12","author":"Coleman","year":"2021","journal-title":"mBio"},{"key":"10.1016\/j.smim.2024.101891_bib32","doi-asserted-by":"crossref","first-page":"769","DOI":"10.1146\/annurev-biochem-011520-105053","article-title":"Mucins and the microbiome","volume":"89","author":"Hansson","year":"2020","journal-title":"Annu. Rev. Biochem."},{"key":"10.1016\/j.smim.2024.101891_bib33","doi-asserted-by":"crossref","first-page":"8456","DOI":"10.1038\/s41598-022-11819-z","article-title":"Characterizing the mucin-degrading capacity of the human gut microbiota","volume":"12","author":"Glover","year":"2022","journal-title":"Sci. Rep."},{"key":"10.1016\/j.smim.2024.101891_bib34","doi-asserted-by":"crossref","first-page":"1571","DOI":"10.1038\/s41564-019-0466-x","article-title":"Complex N-glycan breakdown by gut Bacteroides involves an extensive enzymatic apparatus encoded by multiple co-regulated genetic loci","volume":"4","author":"Briliute","year":"2019","journal-title":"Nat. Microbiol."},{"key":"10.1016\/j.smim.2024.101891_bib35","doi-asserted-by":"crossref","DOI":"10.1242\/jcs.240929","article-title":"Membrane mucins of the intestine at a glance","volume":"133","author":"Pelaseyed","year":"2020","journal-title":"J. Cell Sci."},{"key":"10.1016\/j.smim.2024.101891_bib36","doi-asserted-by":"crossref","first-page":"756","DOI":"10.1093\/glycob\/cwp048","article-title":"A complex, but uniform O-glycosylation of the human MUC2 mucin from colonic biopsies analyzed by nanoLC\/MSn","volume":"19","author":"Larsson","year":"2009","journal-title":"Glycobiology"},{"key":"10.1016\/j.smim.2024.101891_bib37","doi-asserted-by":"crossref","DOI":"10.1042\/BCJ20190180","article-title":"The human transmembrane mucin MUC17 responds to TNFalpha by increased presentation at the plasma membrane","author":"Schneider","year":"2019","journal-title":"Biochem. J."},{"key":"10.1016\/j.smim.2024.101891_bib38","doi-asserted-by":"crossref","first-page":"G1144","DOI":"10.1152\/ajpgi.00138.2010","article-title":"Muc17 protects intestinal epithelial cells from enteroinvasive E. coli infection by promoting epithelial barrier integrity","volume":"300","author":"Resta-Lenert","year":"2011","journal-title":"Am. J. Physiol. Gastrointest. Liver Physiol."},{"key":"10.1016\/j.smim.2024.101891_bib39","doi-asserted-by":"crossref","DOI":"10.1371\/journal.ppat.1000617","article-title":"MUC1 limits Helicobacter pylori infection both by steric hindrance and by acting as a releasable decoy","volume":"5","author":"Linden","year":"2009","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.smim.2024.101891_bib40","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1093\/glycob\/cww086","article-title":"Biological roles of glycans","volume":"27","author":"Varki","year":"2017","journal-title":"Glycobiology"},{"key":"10.1016\/j.smim.2024.101891_bib41","doi-asserted-by":"crossref","first-page":"322","DOI":"10.1016\/j.immuni.2012.03.004","article-title":"Regulatory circuits mediated by lectin-glycan interactions in autoimmunity and cancer","volume":"36","author":"Rabinovich","year":"2012","journal-title":"Immunity"},{"key":"10.1016\/j.smim.2024.101891_bib42","doi-asserted-by":"crossref","first-page":"540","DOI":"10.1038\/nrc3982","article-title":"Glycosylation in cancer: mechanisms and clinical implications","volume":"15","author":"Pinho","year":"2015","journal-title":"Nat. Rev. Cancer"},{"key":"10.1016\/j.smim.2024.101891_bib43","doi-asserted-by":"crossref","first-page":"447","DOI":"10.1016\/j.chom.2008.09.007","article-title":"Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont","volume":"4","author":"Martens","year":"2008","journal-title":"Cell host Microbe"},{"key":"10.1016\/j.smim.2024.101891_bib44","doi-asserted-by":"crossref","first-page":"7037","DOI":"10.1073\/pnas.1704367114","article-title":"How members of the human gut microbiota overcome the sulfation problem posed by glycosaminoglycans","volume":"114","author":"Cartmell","year":"2017","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib45","doi-asserted-by":"crossref","first-page":"646","DOI":"10.1038\/s41467-020-14509-4","article-title":"Metabolism of multiple glycosaminoglycans by Bacteroides thetaiotaomicron is orchestrated by a versatile core genetic locus","volume":"11","author":"Ndeh","year":"2020","journal-title":"Nat. Commun."},{"key":"10.1016\/j.smim.2024.101891_bib46","doi-asserted-by":"crossref","first-page":"463","DOI":"10.1126\/science.1242674","article-title":"Immunology. Feed your Tregs more fiber","volume":"341","author":"Bollrath","year":"2013","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib47","doi-asserted-by":"crossref","DOI":"10.1016\/j.isci.2022.105798","article-title":"ABO blood group antigens and differential glycan expression: perspective on the evolution of common human enzyme deficiencies","volume":"26","author":"Jajosky","year":"2023","journal-title":"iScience"},{"key":"10.1016\/j.smim.2024.101891_bib48","doi-asserted-by":"crossref","first-page":"841","DOI":"10.1016\/j.cell.2006.08.022","article-title":"Nothing in glycobiology makes sense, except in the light of evolution","volume":"126","author":"Varki","year":"2006","journal-title":"Cell"},{"key":"10.1016\/j.smim.2024.101891_bib49","doi-asserted-by":"crossref","first-page":"1485","DOI":"10.1002\/1873-3468.14347","article-title":"Glycans as a key factor in self and nonself discrimination: impact on the breach of immune tolerance","volume":"596","author":"Alves","year":"2022","journal-title":"FEBS Lett."},{"issue":"Suppl 2","key":"10.1016\/j.smim.2024.101891_bib50","doi-asserted-by":"crossref","first-page":"105","DOI":"10.1111\/j.1423-0410.2000.tb00046.x","article-title":"Molecular genetics of H","volume":"78","author":"Oriol","year":"2000","journal-title":"Vox Sang."},{"key":"10.1016\/j.smim.2024.101891_bib51","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1038\/s41588-021-00992-y","article-title":"Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project","volume":"54","author":"Lopera-Maya","year":"2022","journal-title":"Nat. Genet"},{"key":"10.1016\/j.smim.2024.101891_bib52","doi-asserted-by":"crossref","DOI":"10.1371\/journal.pone.0020113","article-title":"Secretor genotype (FUT2 gene) is strongly associated with the composition of Bifidobacteria in the human intestine","volume":"6","author":"Wacklin","year":"2011","journal-title":"PLoS One"},{"key":"10.1016\/j.smim.2024.101891_bib53","doi-asserted-by":"crossref","first-page":"17059","DOI":"10.1073\/pnas.1306070110","article-title":"Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota","volume":"110","author":"Kashyap","year":"2013","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib54","doi-asserted-by":"crossref","first-page":"638","DOI":"10.1038\/nature13823","article-title":"Rapid fucosylation of intestinal epithelium sustains host-commensal symbiosis in sickness","volume":"514","author":"Pickard","year":"2014","journal-title":"Nature"},{"key":"10.1016\/j.smim.2024.101891_bib55","doi-asserted-by":"crossref","first-page":"504","DOI":"10.1016\/j.chom.2014.08.017","article-title":"Epithelial IL-22RA1-mediated fucosylation promotes intestinal colonization resistance to an opportunistic pathogen","volume":"16","author":"Pham","year":"2014","journal-title":"Cell host Microbe"},{"key":"10.1016\/j.smim.2024.101891_bib56","doi-asserted-by":"crossref","first-page":"65","DOI":"10.12688\/wellcomeopenres.14636.2","article-title":"FUT2 secretor genotype and susceptibility to infections and chronic conditions in the ALSPAC cohort","volume":"3","author":"Azad","year":"2018","journal-title":"Wellcome Open Res."},{"key":"10.1016\/j.smim.2024.101891_bib57","doi-asserted-by":"crossref","first-page":"3468","DOI":"10.1093\/hmg\/ddq248","article-title":"Fucosyltransferase 2 (FUT2) non-secretor status is associated with Crohn's disease","volume":"19","author":"McGovern","year":"2010","journal-title":"Hum. Mol. Genet"},{"key":"10.1016\/j.smim.2024.101891_bib58","doi-asserted-by":"crossref","first-page":"1525","DOI":"10.1093\/glycob\/cwp131","article-title":"Fut2-null mice display an altered glycosylation profile and impaired BabA-mediated Helicobacter pylori adhesion to gastric mucosa","volume":"19","author":"Magalhaes","year":"2009","journal-title":"Glycobiology"},{"key":"10.1016\/j.smim.2024.101891_bib59","doi-asserted-by":"crossref","first-page":"548","DOI":"10.1038\/nm860","article-title":"Human susceptibility and resistance to Norwalk virus infection","volume":"9","author":"Lindesmith","year":"2003","journal-title":"Nat. Med"},{"key":"10.1016\/j.smim.2024.101891_bib60","doi-asserted-by":"crossref","DOI":"10.3390\/pathogens9100795","article-title":"FUT2 secretor status influences susceptibility to VP4 strain-specific rotavirus infections in South African Children","volume":"9","author":"MacDonald","year":"2020","journal-title":"Pathogens"},{"key":"10.1016\/j.smim.2024.101891_bib61","doi-asserted-by":"crossref","first-page":"801","DOI":"10.1128\/CMR.00109-14","article-title":"Blood groups in infection and host susceptibility","volume":"28","author":"Cooling","year":"2015","journal-title":"Clin. Microbiol Rev."},{"key":"10.1016\/j.smim.2024.101891_bib62","doi-asserted-by":"crossref","first-page":"454","DOI":"10.1038\/nbt1298","article-title":"Bacterial glycosidases for the production of universal red blood cells","volume":"25","author":"Liu","year":"2007","journal-title":"Nat. Biotechnol."},{"key":"10.1016\/j.smim.2024.101891_bib63","doi-asserted-by":"crossref","first-page":"2250","DOI":"10.1182\/blood-2007-03-077602","article-title":"The ABO blood group system and Plasmodium falciparum malaria","volume":"110","author":"Cserti","year":"2007","journal-title":"Blood"},{"key":"10.1016\/j.smim.2024.101891_bib64","doi-asserted-by":"crossref","first-page":"583","DOI":"10.1038\/s41586-018-0617-x","article-title":"Temporal development of the gut microbiome in early childhood from the TEDDY study","volume":"562","author":"Stewart","year":"2018","journal-title":"Nature"},{"key":"10.1016\/j.smim.2024.101891_bib65","doi-asserted-by":"crossref","DOI":"10.1038\/s41396-023-01525-7","article-title":"Human milk oligosaccharides modify the strength of priority effects in the Bifidobacterium community assembly during infancy","author":"Laursen","year":"2023","journal-title":"ISME J."},{"key":"10.1016\/j.smim.2024.101891_bib66","doi-asserted-by":"crossref","first-page":"44","DOI":"10.1096\/fj.02-0031fje","article-title":"The role of indigenous microflora in the development of murine intestinal fucosyl- and sialyltransferases","volume":"17","author":"Nanthakumar","year":"2003","journal-title":"FASEB J."},{"key":"10.1016\/j.smim.2024.101891_bib67","doi-asserted-by":"crossref","first-page":"11064","DOI":"10.1074\/jbc.M116.720789","article-title":"Mammalian alpha-1,6-Fucosyltransferase (FUT8) Is the Sole Enzyme Responsible for the N-Acetylglucosaminyltransferase I-independent Core Fucosylation of High-mannose N-Glycans","volume":"291","author":"Yang","year":"2016","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.smim.2024.101891_bib68","doi-asserted-by":"crossref","first-page":"2912","DOI":"10.1021\/pr300008u","article-title":"Comparison of the human and bovine milk N-glycome via high-performance microfluidic chip liquid chromatography and tandem mass spectrometry","volume":"11","author":"Nwosu","year":"2012","journal-title":"J. Proteome Res"},{"key":"10.1016\/j.smim.2024.101891_bib69","doi-asserted-by":"crossref","DOI":"10.1128\/mBio.00128-19","article-title":"Core Fucosylation of Maternal Milk N-Glycan Evokes B cell activation by selectively promoting the l-fucose metabolism of Gut Bifidobacterium spp. and Lactobacillus spp","volume":"10","author":"Li","year":"2019","journal-title":"mBio"},{"key":"10.1016\/j.smim.2024.101891_bib70","doi-asserted-by":"crossref","first-page":"477","DOI":"10.21037\/atm.2018.10.45","article-title":"Congenital disorders of glycosylation","volume":"6","author":"Chang","year":"2018","journal-title":"Ann. Transl. Med"},{"key":"10.1016\/j.smim.2024.101891_bib71","article-title":"L-Fucose treatment of FUT8-CDG","volume":"25","author":"Park","year":"2020","journal-title":"Mol. Genet Metab. Rep."},{"key":"10.1016\/j.smim.2024.101891_bib72","doi-asserted-by":"crossref","first-page":"1620","DOI":"10.1053\/j.gastro.2016.03.002","article-title":"Core fucosylation on T cells, required for activation of T-cell receptor signaling and induction of colitis in mice, is increased in patients with inflammatory bowel disease","volume":"150","author":"Fujii","year":"2016","journal-title":"Gastroenterology"},{"key":"10.1016\/j.smim.2024.101891_bib73","doi-asserted-by":"crossref","first-page":"114","DOI":"10.1093\/glycob\/cwm107","article-title":"Reduced alpha4beta1 integrin\/VCAM-1 interactions lead to impaired pre-B cell repopulation in alpha 1,6-fucosyltransferase deficient mice","volume":"18","author":"Li","year":"2008","journal-title":"Glycobiology"},{"key":"10.1016\/j.smim.2024.101891_bib74","doi-asserted-by":"crossref","first-page":"2596","DOI":"10.4049\/jimmunol.1402678","article-title":"Core fucosylation of IgG B cell receptor is required for antigen recognition and antibody production","volume":"194","author":"Li","year":"2015","journal-title":"J. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib75","doi-asserted-by":"crossref","DOI":"10.1073\/pnas.2205277119","article-title":"The ulcerative colitis-associated gene FUT8 regulates the quantity and quality of secreted mucins","volume":"119","author":"Cantero-Recasens","year":"2022","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib76","doi-asserted-by":"crossref","first-page":"95","DOI":"10.1053\/j.gastro.2019.08.060","article-title":"Protein Glycosylation as a diagnostic and prognostic marker of chronic inflammatory gastrointestinal and liver diseases","volume":"158","author":"Verhelst","year":"2020","journal-title":"Gastroenterology"},{"key":"10.1016\/j.smim.2024.101891_bib77","doi-asserted-by":"crossref","DOI":"10.14309\/ctg.0000000000000166","article-title":"Genetic Variants of the MGAT5 gene are functionally implicated in the modulation of T cells glycosylation and plasma IgG glycome composition in ulcerative colitis","volume":"11","author":"Pereira","year":"2020","journal-title":"Clin. Transl. Gastroenterol."},{"key":"10.1016\/j.smim.2024.101891_bib78","doi-asserted-by":"crossref","first-page":"2416","DOI":"10.1093\/hmg\/ddt632","article-title":"Dysregulation of T cell receptor N-glycosylation: a molecular mechanism involved in ulcerative colitis","volume":"23","author":"Dias","year":"2014","journal-title":"Hum. Mol. Genet"},{"key":"10.1016\/j.smim.2024.101891_bib79","doi-asserted-by":"crossref","first-page":"E4651","DOI":"10.1073\/pnas.1720409115","article-title":"Metabolic control of T cell immune response through glycans in inflammatory bowel disease","volume":"115","author":"Dias","year":"2018","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib80","doi-asserted-by":"crossref","DOI":"10.1038\/s41590-024-01916-8","article-title":"A unique serum IgG glycosylation signature predicts development of Crohn's disease and is associated with pathogenic antibodies to mannose glycan","author":"Gaifem","year":"2024","journal-title":"Nat. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib81","doi-asserted-by":"crossref","first-page":"611","DOI":"10.1016\/j.gtc.2009.07.010","article-title":"Pediatric inflammatory bowel disease: highlighting pediatric differences in IBD","volume":"38","author":"Sauer","year":"2009","journal-title":"Gastroenterol. Clin. North Am."},{"key":"10.1016\/j.smim.2024.101891_bib82","doi-asserted-by":"crossref","DOI":"10.1016\/j.jprot.2021.104369","article-title":"Elevated colonic microbiota-associated paucimannosidic and truncated N-glycans in pediatric ulcerative colitis","volume":"249","author":"Li","year":"2021","journal-title":"J. Proteom."},{"key":"10.1016\/j.smim.2024.101891_bib83","doi-asserted-by":"crossref","DOI":"10.1126\/scitranslmed.abo1930","article-title":"Host-derived mannose glycans trigger a pathogenic gammadelta T cell\/IL-17a axis in autoimmunity","volume":"15","author":"Alves","year":"2023","journal-title":"Sci. Transl. Med"},{"key":"10.1016\/j.smim.2024.101891_bib84","doi-asserted-by":"crossref","first-page":"1778","DOI":"10.1126\/science.1106469","article-title":"Human symbionts use a host-like pathway for surface fucosylation","volume":"307","author":"Coyne","year":"2005","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib85","doi-asserted-by":"crossref","first-page":"9833","DOI":"10.1073\/pnas.96.17.9833","article-title":"A molecular sensor that allows a gut commensal to control its nutrient foundation in a competitive ecosystem","volume":"96","author":"Hooper","year":"1999","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib86","doi-asserted-by":"crossref","DOI":"10.1126\/science.1254009","article-title":"Innate lymphoid cells regulate intestinal epithelial cell glycosylation","volume":"345","author":"Goto","year":"2014","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib87","doi-asserted-by":"crossref","first-page":"1489","DOI":"10.1053\/j.gastro.2014.02.009","article-title":"The microbiome in inflammatory bowel disease: current status and the future ahead","volume":"146","author":"Kostic","year":"2014","journal-title":"Gastroenterology"},{"key":"10.1016\/j.smim.2024.101891_bib88","doi-asserted-by":"crossref","first-page":"204","DOI":"10.1016\/j.chom.2007.08.002","article-title":"Host-mediated inflammation disrupts the intestinal microbiota and promotes the overgrowth of Enterobacteriaceae","volume":"2","author":"Lupp","year":"2007","journal-title":"Cell host Microbe"},{"key":"10.1016\/j.smim.2024.101891_bib89","doi-asserted-by":"crossref","first-page":"275","DOI":"10.1002\/ibd.20736","article-title":"Lactobacillus casei downregulates commensals' inflammatory signals in Crohn's disease mucosa","volume":"15","author":"Llopis","year":"2009","journal-title":"Inflamm. Bowel Dis."},{"key":"10.1016\/j.smim.2024.101891_bib90","doi-asserted-by":"crossref","first-page":"16731","DOI":"10.1073\/pnas.0804812105","article-title":"Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients","volume":"105","author":"Sokol","year":"2008","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib91","doi-asserted-by":"crossref","first-page":"1183","DOI":"10.1002\/ibd.20903","article-title":"Low counts of Faecalibacterium prausnitzii in colitis microbiota","volume":"15","author":"Sokol","year":"2009","journal-title":"Inflamm. Bowel Dis."},{"key":"10.1016\/j.smim.2024.101891_bib92","doi-asserted-by":"crossref","first-page":"337","DOI":"10.1038\/s41564-017-0089-z","article-title":"Dynamics of metatranscription in the inflammatory bowel disease gut microbiome","volume":"3","author":"Schirmer","year":"2018","journal-title":"Nat. Microbiol."},{"key":"10.1016\/j.smim.2024.101891_bib93","doi-asserted-by":"crossref","first-page":"655","DOI":"10.1038\/s41586-019-1237-9","article-title":"Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases","volume":"569","author":"Lloyd-Price","year":"2019","journal-title":"Nature"},{"key":"10.1016\/j.smim.2024.101891_bib94","doi-asserted-by":"crossref","first-page":"332","DOI":"10.1038\/s41586-021-03967-5","article-title":"A single sulfatase is required to access colonic mucin by a gut bacterium","volume":"598","author":"Luis","year":"2021","journal-title":"Nature"},{"key":"10.1016\/j.smim.2024.101891_bib95","doi-asserted-by":"crossref","first-page":"4017","DOI":"10.1038\/s41467-020-17847-5","article-title":"Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown","volume":"11","author":"Crouch","year":"2020","journal-title":"Nat. Commun."},{"key":"10.1016\/j.smim.2024.101891_bib96","doi-asserted-by":"crossref","first-page":"331","DOI":"10.1042\/EBC20220153","article-title":"O-Mucin-degrading carbohydrate-active enzymes and their possible implication in inflammatory bowel diseases","volume":"67","author":"Labourel","year":"2023","journal-title":"Essays Biochem"},{"key":"10.1016\/j.smim.2024.101891_bib97","doi-asserted-by":"crossref","first-page":"345","DOI":"10.1042\/EBC20220121","article-title":"Mucin utilization by gut microbiota: recent advances on characterization of key enzymes","volume":"67","author":"Raba","year":"2023","journal-title":"Essays Biochem"},{"key":"10.1016\/j.smim.2024.101891_bib98","doi-asserted-by":"crossref","first-page":"282","DOI":"10.1186\/s12866-014-0282-7","article-title":"Cross-feeding by Bifidobacterium breve UCC2003 during co-cultivation with Bifidobacterium bifidum PRL2010 in a mucin-based medium","volume":"14","author":"Egan","year":"2014","journal-title":"BMC Microbiol."},{"key":"10.1016\/j.smim.2024.101891_bib99","doi-asserted-by":"crossref","first-page":"1833","DOI":"10.1038\/s41467-023-37533-6","article-title":"Sialidases and fucosidases of Akkermansia muciniphila are crucial for growth on mucin and nutrient sharing with mucus-associated gut bacteria","volume":"14","author":"Shuoker","year":"2023","journal-title":"Nat. Commun."},{"key":"10.1016\/j.smim.2024.101891_bib100","doi-asserted-by":"crossref","DOI":"10.3389\/fmolb.2022.1075459","article-title":"Increase of intestinal bacterial sialidase activity exacerbates acute colitis in mice","volume":"9","author":"Hasler","year":"2022","journal-title":"Front Mol. Biosci."},{"key":"10.1016\/j.smim.2024.101891_bib101","doi-asserted-by":"crossref","DOI":"10.1371\/journal.ppat.1005290","article-title":"Utilizing CMP-sialic acid analogs to unravel neisseria gonorrhoeae Lipooligosaccharide-mediated complement resistance and design novel therapeutics","volume":"11","author":"Gulati","year":"2015","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.smim.2024.101891_bib102","doi-asserted-by":"crossref","DOI":"10.1038\/s41579-024-01068-4","article-title":"The interplay between diet and the gut microbiome: implications for health and disease","author":"Ross","year":"2024","journal-title":"Nat. Rev. Microbiol"},{"key":"10.1016\/j.smim.2024.101891_bib103","doi-asserted-by":"crossref","first-page":"559","DOI":"10.1038\/nature12820","article-title":"Diet rapidly and reproducibly alters the human gut microbiome","volume":"505","author":"David","year":"2014","journal-title":"Nature"},{"key":"10.1016\/j.smim.2024.101891_bib104","doi-asserted-by":"crossref","first-page":"283","DOI":"10.1186\/s12866-020-01968-4","article-title":"Relative abundance of the Prevotella genus within the human gut microbiota of elderly volunteers determines the inter-individual responses to dietary supplementation with wheat bran arabinoxylan-oligosaccharides","volume":"20","author":"Chung","year":"2020","journal-title":"BMC Microbiol."},{"key":"10.1016\/j.smim.2024.101891_bib105","doi-asserted-by":"crossref","first-page":"321","DOI":"10.1038\/s41591-020-01183-8","article-title":"Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals","volume":"27","author":"Asnicar","year":"2021","journal-title":"Nat. Med"},{"key":"10.1016\/j.smim.2024.101891_bib106","doi-asserted-by":"crossref","first-page":"14691","DOI":"10.1073\/pnas.1005963107","article-title":"Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa","volume":"107","author":"De Filippo","year":"2010","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib107","doi-asserted-by":"crossref","first-page":"314","DOI":"10.1016\/j.chom.2022.02.001","article-title":"Diverse events have transferred genes for edible seaweed digestion from marine to human gut bacteria","volume":"30","author":"Pudlo","year":"2022","journal-title":"Cell host Microbe"},{"key":"10.1016\/j.smim.2024.101891_bib108","doi-asserted-by":"crossref","first-page":"553","DOI":"10.1016\/j.chom.2019.03.001","article-title":"Human salivary amylase gene copy number impacts oral and gut microbiomes","volume":"25","author":"Poole","year":"2019","journal-title":"Cell host Microbe"},{"key":"10.1016\/j.smim.2024.101891_bib109","doi-asserted-by":"crossref","first-page":"1339","DOI":"10.1016\/j.cell.2016.10.043","article-title":"A dietary fiber-deprived gut microbiota degrades the colonic mucus barrier and enhances pathogen susceptibility","volume":"167","author":"Desai","year":"2016","journal-title":"Cell"},{"key":"10.1016\/j.smim.2024.101891_bib110","doi-asserted-by":"crossref","first-page":"596","DOI":"10.1038\/s44320-024-00036-7","article-title":"Diet-driven differential response of Akkermansia muciniphila modulates pathogen susceptibility","volume":"20","author":"Wolter","year":"2024","journal-title":"Mol. Syst. Biol."},{"key":"10.1016\/j.smim.2024.101891_bib111","doi-asserted-by":"crossref","first-page":"602","DOI":"10.1126\/science.abb5920","article-title":"Fecal microbiota transplant promotes response in immunotherapy-refractory melanoma patients","volume":"371","author":"Baruch","year":"2021","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib112","doi-asserted-by":"crossref","first-page":"595","DOI":"10.1126\/science.abf3363","article-title":"Fecal microbiota transplant overcomes resistance to anti-PD-1 therapy in melanoma patients","volume":"371","author":"Davar","year":"2021","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib113","doi-asserted-by":"crossref","first-page":"47","DOI":"10.1186\/s13045-022-01273-9","article-title":"Gut microbiota influence immunotherapy responses: mechanisms and therapeutic strategies","volume":"15","author":"Lu","year":"2022","journal-title":"J. Hematol. Oncol."},{"key":"10.1016\/j.smim.2024.101891_bib114","doi-asserted-by":"crossref","first-page":"1084","DOI":"10.1126\/science.aac4255","article-title":"Commensal Bifidobacterium promotes antitumor immunity and facilitates anti-PD-L1 efficacy","volume":"350","author":"Sivan","year":"2015","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib115","doi-asserted-by":"crossref","DOI":"10.3390\/cancers13194824","article-title":"The gut microbiome and cancer immunotherapy: can we use the gut microbiome as a predictive biomarker for Clinical Response in cancer immunotherapy?","volume":"13","author":"Oh","year":"2021","journal-title":"Cancers (Basel)"},{"key":"10.1016\/j.smim.2024.101891_bib116","doi-asserted-by":"crossref","DOI":"10.3892\/ijo.2021.5255","article-title":"Novel insights on gut microbiota manipulation and immune checkpoint inhibition in cancer (Review)","volume":"59","author":"Vivarelli","year":"2021","journal-title":"Int J. Oncol."},{"key":"10.1016\/j.smim.2024.101891_bib117","doi-asserted-by":"crossref","first-page":"545","DOI":"10.1038\/s41591-022-01698-2","article-title":"Intestinal microbiota signatures of clinical response and immune-related adverse events in melanoma patients treated with anti-PD-1","volume":"28","author":"McCulloch","year":"2022","journal-title":"Nat. Med"},{"key":"10.1016\/j.smim.2024.101891_bib118","doi-asserted-by":"crossref","first-page":"457","DOI":"10.1136\/gutjnl-2020-323392","article-title":"Helicobacter pylori infection has a detrimental impact on the efficacy of cancer immunotherapies","volume":"71","author":"Oster","year":"2022","journal-title":"Gut"},{"key":"10.1016\/j.smim.2024.101891_bib119","doi-asserted-by":"crossref","first-page":"398","DOI":"10.1038\/s41392-021-00795-x","article-title":"Fusobacterium nucleatum enhances the efficacy of PD-L1 blockade in colorectal cancer","volume":"6","author":"Gao","year":"2021","journal-title":"Signal Transduct. Target Ther."},{"key":"10.1016\/j.smim.2024.101891_bib120","doi-asserted-by":"crossref","first-page":"2168","DOI":"10.1038\/s41467-020-16079-x","article-title":"Systemic short chain fatty acids limit antitumor effect of CTLA-4 blockade in hosts with cancer","volume":"11","author":"Coutzac","year":"2020","journal-title":"Nat. Commun."},{"key":"10.1016\/j.smim.2024.101891_bib121","doi-asserted-by":"crossref","first-page":"1481","DOI":"10.1126\/science.abc3421","article-title":"Microbiome-derived inosine modulates response to checkpoint inhibitor immunotherapy","volume":"369","author":"Mager","year":"2020","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib122","doi-asserted-by":"crossref","first-page":"1079","DOI":"10.1126\/science.aad1329","article-title":"Anticancer immunotherapy by CTLA-4 blockade relies on the gut microbiota","volume":"350","author":"V\u00e9tizou","year":"2015","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib123","doi-asserted-by":"crossref","first-page":"581","DOI":"10.1016\/j.cmet.2022.02.010","article-title":"The microbial metabolite trimethylamine N-oxide promotes antitumor immunity in triple-negative breast cancer","volume":"34","author":"Wang","year":"2022","journal-title":"Cell Metab."},{"key":"10.1016\/j.smim.2024.101891_bib124","doi-asserted-by":"crossref","DOI":"10.1172\/jci.insight.135597","article-title":"Commensal bacteria stimulate antitumor responses via T cell cross-reactivity","volume":"5","author":"Bessell","year":"2020","journal-title":"JCI Insight"},{"key":"10.1016\/j.smim.2024.101891_bib125","doi-asserted-by":"crossref","first-page":"967","DOI":"10.1126\/science.1240527","article-title":"Commensal bacteria control cancer response to therapy by modulating the tumor microenvironment","volume":"342","author":"Iida","year":"2013","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib126","doi-asserted-by":"crossref","first-page":"111931","DOI":"10.18632\/oncotarget.22953","article-title":"The impact of antibiotic usage on the efficacy of chemoimmunotherapy is contingent on the source of tumor-reactive T cells","volume":"8","author":"Kuczma","year":"2017","journal-title":"Oncotarget"},{"key":"10.1016\/j.smim.2024.101891_bib127","doi-asserted-by":"crossref","first-page":"2197","DOI":"10.1172\/JCI32205","article-title":"Microbial translocation augments the function of adoptively transferred self\/tumor-specific CD8+ T cells via TLR4 signaling","volume":"117","author":"Paulos","year":"2007","journal-title":"J. Clin. Invest"},{"key":"10.1016\/j.smim.2024.101891_bib128","doi-asserted-by":"crossref","first-page":"157","DOI":"10.1073\/pnas.1712901115","article-title":"Bifidobacterium can mitigate intestinal immunopathology in the context of CTLA-4 blockade","volume":"115","author":"Wang","year":"2018","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib129","doi-asserted-by":"crossref","first-page":"1567","DOI":"10.1046\/j.1365-2036.2000.00883.x","article-title":"A pilot study of N-acetyl glucosamine, a nutritional substrate for glycosaminoglycan synthesis, in paediatric chronic inflammatory bowel disease","volume":"14","author":"Salvatore","year":"2000","journal-title":"Aliment Pharm. Ther."},{"key":"10.1016\/j.smim.2024.101891_bib130","doi-asserted-by":"crossref","first-page":"448","DOI":"10.1016\/j.carbpol.2014.09.012","article-title":"Anti-inflammatory effects of orally administered glucosamine oligomer in an experimental model of inflammatory bowel disease","volume":"115","author":"Azuma","year":"2015","journal-title":"Carbohydr. Polym."},{"key":"10.1016\/j.smim.2024.101891_bib131","doi-asserted-by":"crossref","first-page":"957","DOI":"10.1111\/jgh.12485","article-title":"Effects of dietary supplementation of glucosamine sulfate on intestinal inflammation in a mouse model of experimental colitis","volume":"29","author":"Bak","year":"2014","journal-title":"J. Gastroenterol. Hepatol."},{"key":"10.1016\/j.smim.2024.101891_bib132","doi-asserted-by":"crossref","first-page":"1244","DOI":"10.1038\/s41467-022-28856-x","article-title":"Synthetic glycans control gut microbiome structure and mitigate colitis in mice","volume":"13","author":"Tolonen","year":"2022","journal-title":"Nat. Commun."},{"key":"10.1016\/j.smim.2024.101891_bib133","doi-asserted-by":"crossref","first-page":"59","DOI":"10.1159\/000441768","article-title":"Reduced abundance of butyrate-producing bacteria species in the fecal microbial community in Crohn's Disease","volume":"93","author":"Takahashi","year":"2016","journal-title":"Digestion"},{"key":"10.1016\/j.smim.2024.101891_bib134","doi-asserted-by":"crossref","first-page":"1917","DOI":"10.3389\/fmicb.2018.01917","article-title":"Utilization of host-derived glycans by intestinal Lactobacillus and bifidobacterium species","volume":"9","author":"Zuniga","year":"2018","journal-title":"Front Microbiol"},{"key":"10.1016\/j.smim.2024.101891_bib135","doi-asserted-by":"crossref","first-page":"569","DOI":"10.1016\/0140-6736(90)90350-E","article-title":"Preliminary study of breastfeeding and bacterial adhesion to uroepithelial cells","volume":"335","author":"Coppa","year":"1990","journal-title":"Lancet"},{"key":"10.1016\/j.smim.2024.101891_bib136","doi-asserted-by":"crossref","first-page":"377","DOI":"10.1203\/01.pdr.0000200805.45593.17","article-title":"Human milk oligosaccharides inhibit the adhesion to Caco-2 cells of diarrheal pathogens: Escherichia coli, Vibrio cholerae, and Salmonella fyris","volume":"59","author":"Coppa","year":"2006","journal-title":"Pedia Res"},{"key":"10.1016\/j.smim.2024.101891_bib137","doi-asserted-by":"crossref","first-page":"1247","DOI":"10.1093\/infdis\/163.6.1247","article-title":"Inhibition of localized adhesion of enteropathogenic Escherichia coli to HEp-2 cells by immunoglobulin and oligosaccharide fractions of human colostrum and breast milk","volume":"163","author":"Cravioto","year":"1991","journal-title":"J. Infect. Dis."},{"key":"10.1016\/j.smim.2024.101891_bib138","doi-asserted-by":"crossref","first-page":"1316","DOI":"10.1016\/S0016-5085(99)70282-9","article-title":"Treatment of Helicobacter pylori infection in rhesus monkeys using a novel antiadhesion compound","volume":"117","author":"Mysore","year":"1999","journal-title":"Gastroenterology"},{"key":"10.1016\/j.smim.2024.101891_bib139","doi-asserted-by":"crossref","first-page":"14112","DOI":"10.1074\/jbc.M207744200","article-title":"Campylobacter jejuni binds intestinal H(O) antigen (Fuc alpha 1, 2Gal beta 1, 4GlcNAc), and fucosyloligosaccharides of human milk inhibit its binding and infection","volume":"278","author":"Ruiz-Palacios","year":"2003","journal-title":"J. Biol. Chem."},{"key":"10.1016\/j.smim.2024.101891_bib140","doi-asserted-by":"crossref","first-page":"297","DOI":"10.1016\/j.jpeds.2004.04.054","article-title":"Human milk oligosaccharides are associated with protection against diarrhea in breast-fed infants","volume":"145","author":"Morrow","year":"2004","journal-title":"J. Pedia"},{"key":"10.1016\/j.smim.2024.101891_bib141","doi-asserted-by":"crossref","first-page":"253","DOI":"10.1093\/glycob\/cwh020","article-title":"Innate protection conferred by fucosylated oligosaccharides of human milk against diarrhea in breastfed infants","volume":"14","author":"Newburg","year":"2004","journal-title":"Glycobiology"},{"key":"10.1016\/j.smim.2024.101891_bib142","doi-asserted-by":"crossref","first-page":"2950","DOI":"10.1080\/14767058.2018.1450864","article-title":"Breast milk oligosaccharides: effects of 2\u2032-fucosyllactose and 6\u2032-sialyllactose on the adhesion of Escherichia coli and Salmonella fyris to Caco-2 cells","volume":"32","author":"Facinelli","year":"2019","journal-title":"J. Matern Fetal Neonatal Med"},{"key":"10.1016\/j.smim.2024.101891_bib143","doi-asserted-by":"crossref","first-page":"801","DOI":"10.3389\/fimmu.2020.00801","article-title":"Immunomodulation by human milk oligosaccharides: the potential role in prevention of allergic diseases","volume":"11","author":"Zuurveld","year":"2020","journal-title":"Front. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib144","doi-asserted-by":"crossref","first-page":"1402","DOI":"10.1160\/TH04-01-0055","article-title":"Inhibition of monocyte, lymphocyte, and neutrophil adhesion to endothelial cells by human milk oligosaccharides","volume":"92","author":"Bode","year":"2004","journal-title":"Thromb. Haemost."},{"key":"10.1016\/j.smim.2024.101891_bib145","doi-asserted-by":"crossref","first-page":"820","DOI":"10.1189\/jlb.0304198","article-title":"Human milk oligosaccharides reduce platelet-neutrophil complex formation leading to a decrease in neutrophil beta 2 integrin expression","volume":"76","author":"Bode","year":"2004","journal-title":"J. Leukoc. Biol."},{"key":"10.1016\/j.smim.2024.101891_bib146","doi-asserted-by":"crossref","first-page":"1773","DOI":"10.3389\/fimmu.2019.01773","article-title":"Immunomodulatory and prebiotic effects of 2\u2032-Fucosyllactose in Suckling Rats","volume":"10","author":"Azagra-Boronat","year":"2019","journal-title":"Front Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib147","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1080\/19490976.2021.1914377","article-title":"Infant gut microbiota modulation by human milk disaccharides in humanized microbiome mice","volume":"13","author":"Rubio-Del-Campo","year":"2021","journal-title":"Gut Microbes"},{"key":"10.1016\/j.smim.2024.101891_bib148","doi-asserted-by":"crossref","first-page":"762","DOI":"10.1038\/s41589-022-01035-1","article-title":"Mucin O-glycans are natural inhibitors of Candida albicans pathogenicity","volume":"18","author":"Takagi","year":"2022","journal-title":"Nat. Chem. Biol."},{"key":"10.1016\/j.smim.2024.101891_bib149","doi-asserted-by":"crossref","first-page":"3672","DOI":"10.1128\/IAI.00854-13","article-title":"The mucin Muc2 limits pathogen burdens and epithelial barrier dysfunction during Salmonella enterica serovar Typhimurium colitis","volume":"81","author":"Zarepour","year":"2013","journal-title":"Infect. Immun."},{"key":"10.1016\/j.smim.2024.101891_bib150","doi-asserted-by":"crossref","DOI":"10.1371\/journal.ppat.1000902","article-title":"Muc2 protects against lethal infectious colitis by disassociating pathogenic and commensal bacteria from the colonic mucosa","volume":"6","author":"Bergstrom","year":"2010","journal-title":"PLoS Pathog."},{"key":"10.1016\/j.smim.2024.101891_bib151","doi-asserted-by":"crossref","first-page":"1172","DOI":"10.1016\/j.cell.2022.02.013","article-title":"Mucus sialylation determines intestinal host-commensal homeostasis","volume":"185","author":"Yao","year":"2022","journal-title":"Cell"},{"key":"10.1016\/j.smim.2024.101891_bib152","doi-asserted-by":"crossref","first-page":"26","DOI":"10.1186\/s13099-018-0252-y","article-title":"N-Acetyl-glucosamine influences the biofilm formation of Escherichia coli","volume":"10","author":"Sicard","year":"2018","journal-title":"Gut Pathog."},{"key":"10.1016\/j.smim.2024.101891_bib153","doi-asserted-by":"crossref","first-page":"454","DOI":"10.1002\/ibd.20737","article-title":"Prebiotics in chronic intestinal inflammation","volume":"15","author":"Looijer-van Langen","year":"2009","journal-title":"Inflamm. Bowel Dis."},{"key":"10.1016\/j.smim.2024.101891_bib154","doi-asserted-by":"crossref","DOI":"10.3390\/pathogens11090986","article-title":"Effect of probiotics on host-microbiota in bacterial infections","volume":"11","author":"Rueda-Robles","year":"2022","journal-title":"Pathogens"},{"key":"10.1016\/j.smim.2024.101891_bib155","doi-asserted-by":"crossref","first-page":"698S","DOI":"10.3945\/jn.109.113753","article-title":"Guidance for substantiating the evidence for beneficial effects of probiotics: prevention and management of infections by probiotics","volume":"140","author":"Wolvers","year":"2010","journal-title":"J. Nutr."},{"key":"10.1016\/j.smim.2024.101891_bib156","doi-asserted-by":"crossref","first-page":"1017","DOI":"10.1016\/S0140-6736(96)90150-6","article-title":"Oligosaccharide anti-infective agents","volume":"347","author":"Zopf","year":"1996","journal-title":"Lancet"},{"key":"10.1016\/j.smim.2024.101891_bib157","doi-asserted-by":"crossref","first-page":"1920","DOI":"10.1128\/AEM.69.4.1920-1927.2003","article-title":"Nondigestible oligosaccharides enhance bacterial colonization resistance against Clostridium difficile in vitro","volume":"69","author":"Hopkins","year":"2003","journal-title":"Appl. Environ. Microbiol"},{"key":"10.1016\/j.smim.2024.101891_bib158","doi-asserted-by":"crossref","first-page":"154","DOI":"10.1099\/mic.0.000593","article-title":"Galactooligosaccharide supplementation provides protection against Citrobacter rodentium-induced colitis without limiting pathogen burden","volume":"164","author":"Kittana","year":"2018","journal-title":"Microbiol. (Read. )"},{"key":"10.1016\/j.smim.2024.101891_bib159","doi-asserted-by":"crossref","first-page":"G590","DOI":"10.1152\/ajpgi.00211.2015","article-title":"Glycomacropeptide is a prebiotic that reduces Desulfovibrio bacteria, increases cecal short-chain fatty acids, and is anti-inflammatory in mice","volume":"309","author":"Sawin","year":"2015","journal-title":"Am. J. Physiol. Gastrointest. Liver Physiol."},{"key":"10.1016\/j.smim.2024.101891_bib160","doi-asserted-by":"crossref","first-page":"814","DOI":"10.1136\/adc.2006.098251","article-title":"A mixture of prebiotic oligosaccharides reduces the incidence of atopic dermatitis during the first six months of age","volume":"91","author":"Moro","year":"2006","journal-title":"Arch. Dis. Child"},{"key":"10.1016\/j.smim.2024.101891_bib161","doi-asserted-by":"crossref","first-page":"197","DOI":"10.1016\/j.femsim.2004.08.011","article-title":"Beneficial effect of auto-aggregating Lactobacillus crispatus on experimentally induced colitis in mice","volume":"43","author":"Castagliuolo","year":"2005","journal-title":"FEMS Immunol. Med. Microbiol."},{"key":"10.1016\/j.smim.2024.101891_bib162","doi-asserted-by":"crossref","first-page":"320","DOI":"10.1023\/B:DDAS.0000017459.59088.43","article-title":"Modulation of the effect of dextran sulfate sodium-induced acute colitis by the administration of different probiotic strains of Lactobacillus and Bifidobacterium","volume":"49","author":"Osman","year":"2004","journal-title":"Dig. Dis. Sci."},{"key":"10.1016\/j.smim.2024.101891_bib163","doi-asserted-by":"crossref","first-page":"348","DOI":"10.1136\/gut.2005.074971","article-title":"Clinical, microbiological, and immunological effects of fructo-oligosaccharide in patients with Crohn's disease","volume":"55","author":"Lindsay","year":"2006","journal-title":"Gut"},{"key":"10.1016\/j.smim.2024.101891_bib164","doi-asserted-by":"crossref","first-page":"265","DOI":"10.1097\/01.MIB.0000160808.30988.d9","article-title":"Preventative effects of lactulose in the trinitrobenzenesulphonic acid model of rat colitis","volume":"11","author":"Camuesco","year":"2005","journal-title":"Inflamm. Bowel Dis."},{"key":"10.1016\/j.smim.2024.101891_bib165","doi-asserted-by":"crossref","first-page":"217","DOI":"10.1038\/s41573-020-00093-1","article-title":"The clinical impact of glycobiology: targeting selectins, Siglecs and mammalian glycans","volume":"20","author":"Smith","year":"2021","journal-title":"Nat. Rev. Drug Discov."},{"key":"10.1016\/j.smim.2024.101891_bib166","doi-asserted-by":"crossref","first-page":"357","DOI":"10.1146\/annurev-immunol-020711-075018","article-title":"Siglecs and immune regulation","volume":"30","author":"Pillai","year":"2012","journal-title":"Annu Rev. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib167","doi-asserted-by":"crossref","first-page":"157","DOI":"10.1016\/j.clim.2008.11.009","article-title":"Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model","volume":"131","author":"Song","year":"2009","journal-title":"Clin. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib168","doi-asserted-by":"crossref","first-page":"1624","DOI":"10.1056\/NEJMoa2012047","article-title":"Anti-Siglec-8 antibody for Eosinophilic gastritis and duodenitis","volume":"383","author":"Dellon","year":"2020","journal-title":"N. Engl. J. Med"},{"key":"10.1016\/j.smim.2024.101891_bib169","doi-asserted-by":"crossref","first-page":"479","DOI":"10.1038\/s41577-022-00829-7","article-title":"The role of galectins in immunity and infection","volume":"23","author":"Liu","year":"2023","journal-title":"Nat. Rev. Immunol."},{"key":"10.1016\/j.smim.2024.101891_bib170","doi-asserted-by":"crossref","first-page":"1395","DOI":"10.1007\/s00109-007-0290-2","article-title":"Galectin-2 induces apoptosis of lamina propria T lymphocytes and ameliorates acute and chronic experimental colitis in mice","volume":"86","author":"Paclik","year":"2008","journal-title":"J. Mol. Med (Berl. )"},{"key":"10.1016\/j.smim.2024.101891_bib171","doi-asserted-by":"crossref","first-page":"1381","DOI":"10.1016\/S0016-5085(03)00267-1","article-title":"Galectin-1 suppresses experimental colitis in mice","volume":"124","author":"Santucci","year":"2003","journal-title":"Gastroenterology"},{"key":"10.1016\/j.smim.2024.101891_bib172","article-title":"Neu3 neuraminidase induction triggers intestinal inflammation and colitis in a model of recurrent human food-poisoning","volume":"118","author":"Yang","year":"2021","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"10.1016\/j.smim.2024.101891_bib173","doi-asserted-by":"crossref","DOI":"10.1126\/science.aao5610","article-title":"Recurrent infection progressively disables host protection against intestinal inflammation","volume":"358","author":"Yang","year":"2017","journal-title":"Science"},{"key":"10.1016\/j.smim.2024.101891_bib174","doi-asserted-by":"crossref","first-page":"8141","DOI":"10.1038\/ncomms9141","article-title":"Sialic acid catabolism drives intestinal inflammation and microbial dysbiosis in mice","volume":"6","author":"Huang","year":"2015","journal-title":"Nat. Commun."}],"container-title":["Seminars in Immunology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1044532324000290?httpAccept=text\/xml","content-type":"text\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/api.elsevier.com\/content\/article\/PII:S1044532324000290?httpAccept=text\/plain","content-type":"text\/plain","content-version":"vor","intended-application":"text-mining"}],"deposited":{"date-parts":[[2024,10,25]],"date-time":"2024-10-25T01:16:29Z","timestamp":1729818989000},"score":1,"resource":{"primary":{"URL":"https:\/\/linkinghub.elsevier.com\/retrieve\/pii\/S1044532324000290"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,5]]},"references-count":174,"alternative-id":["S1044532324000290"],"URL":"https:\/\/doi.org\/10.1016\/j.smim.2024.101891","relation":{},"ISSN":["1044-5323"],"issn-type":[{"value":"1044-5323","type":"print"}],"subject":[],"published":{"date-parts":[[2024,5]]},"assertion":[{"value":"Elsevier","name":"publisher","label":"This article is maintained by"},{"value":"The role of glycans in health and disease: Regulators of the interaction between gut microbiota and host immune system","name":"articletitle","label":"Article Title"},{"value":"Seminars in Immunology","name":"journaltitle","label":"Journal Title"},{"value":"https:\/\/doi.org\/10.1016\/j.smim.2024.101891","name":"articlelink","label":"CrossRef DOI link to publisher maintained version"},{"value":"article","name":"content_type","label":"Content Type"},{"value":"\u00a9 2024 The Author(s). Published by Elsevier Ltd.","name":"copyright","label":"Copyright"}],"article-number":"101891"}}