{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,13]],"date-time":"2025-11-13T12:29:42Z","timestamp":1763036982594},"reference-count":29,"publisher":"Cambridge University Press (CUP)","issue":"2","license":[{"start":{"date-parts":[[2016,3,31]],"date-time":"2016-03-31T00:00:00Z","timestamp":1459382400000},"content-version":"unspecified","delay-in-days":0,"URL":"https:\/\/www.cambridge.org\/core\/terms"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J. Helminthol."],"published-print":{"date-parts":[[2017,3]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p><jats:italic>Orthocoelium streptocoelium<\/jats:italic> is a common paramphistome species parasitizing the rumen and\/or reticulum of small ruminants, leading to significant losses. This study first determined the complete mitochondrial (mt) genome of <jats:italic>O. streptocoelium<\/jats:italic>. The complete mt genome of <jats:italic>O. streptocoelium<\/jats:italic> was amplified, sequenced, assembled, analysed and then compared with those of other digeneans. The entire mt genome of <jats:italic>O. streptocoelium<\/jats:italic> is 13,800 bp in length, which is smaller than those of other digeneans except for <jats:italic>Opisthorchis viverrini<\/jats:italic>. This mt genome contains 12 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes and two non-coding regions. The arrangement of the <jats:italic>O. streptocoelium<\/jats:italic> mt genome is the same as those of other digeneans except for <jats:italic>Schistosoma haematobium<\/jats:italic> and <jats:italic>Schistosoma spindale<\/jats:italic>. Phylogenetic analyses based on concatenated amino acid sequences of the 12 protein-coding genes representing 16 digeneans were conducted to assess the relationship of <jats:italic>O. streptocoelium<\/jats:italic> with other digeneans. The result indicated that <jats:italic>O. streptocoelium<\/jats:italic> is closely related to <jats:italic>Paramphistomum cervi<\/jats:italic> and <jats:italic>Fischoederius elongates<\/jats:italic>, which is in accordance with their relationships by taxonomy. This complete mt genome of <jats:italic>O. streptocoelium<\/jats:italic> enriched the mitochondrial genome data of paramphistomes and provided important molecular markers for diagnostics and studies of population variation, epidemiology, ecology and evolution of <jats:italic>O. streptocoelium<\/jats:italic> and other digeneans.<\/jats:p>","DOI":"10.1017\/s0022149x16000183","type":"journal-article","created":{"date-parts":[[2016,3,31]],"date-time":"2016-03-31T04:12:50Z","timestamp":1459397570000},"page":"255-261","source":"Crossref","is-referenced-by-count":5,"title":["The complete mitochondrial genome of <i>Orthocoelium streptocoelium<\/i> (Digenea: Paramphistomidae) for comparison with other 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