{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,12]],"date-time":"2026-04-12T17:07:41Z","timestamp":1776013661273,"version":"3.50.1"},"reference-count":62,"publisher":"Cambridge University Press (CUP)","issue":"8","license":[{"start":{"date-parts":[[2023,4,13]],"date-time":"2023-04-13T00:00:00Z","timestamp":1681344000000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100010009","name":"Heilongjiang Provincial Postdoctoral Science Foundation","doi-asserted-by":"publisher","award":["LBH\u2212Z19191"],"award-info":[{"award-number":["LBH\u2212Z19191"]}],"id":[{"id":"10.13039\/501100010009","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["32172886"],"award-info":[{"award-number":["32172886"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["cambridge.org"],"crossmark-restriction":true},"short-container-title":["Parasitology"],"published-print":{"date-parts":[[2023,7]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Trematodes of the genus <jats:italic>Ogmocotyle<\/jats:italic> are intestinal flukes that can infect a variety of definitive hosts, resulting in significant economic losses worldwide. However, there are few studies on molecular data of these trematodes. In this study, the mitochondrial (mt) genome of <jats:italic>Ogmocotyle ailuri<\/jats:italic> isolated from red panda (<jats:italic>Ailurus fulgens<\/jats:italic>) was determined and compared with those from Pronocephalata to investigate the mt genome content, genetic distance, gene rearrangements and phylogeny. The complete mt genome of <jats:italic>O. ailuri<\/jats:italic> is a typical closed circular molecule of 14 642 base pairs, comprising 12 protein-coding genes (PCGs), 22 transfer RNA genes, 2 ribosomal RNA genes and 2 non-coding regions. All genes are transcribed in the same direction. In addition, 23 intergenic spacers and 2 locations with gene overlaps were determined. Sequence identities and sliding window analysis indicated that <jats:italic>cox<\/jats:italic>1 is the most conserved gene among 12 PCGs in <jats:italic>O. ailuri<\/jats:italic> mt genome. The sequenced mt genomes of the 48 Plagiorchiida trematodes showed 5 types of gene arrangement based on all mt genome genes, with the gene arrangement of <jats:italic>O. ailuri<\/jats:italic> being type I. Phylogenetic analysis using concatenated amino acid sequences of 12 PCGs revealed that <jats:italic>O. ailuri<\/jats:italic> was closer to <jats:italic>Ogmocotyle sikae<\/jats:italic> than to <jats:italic>Notocotylus intestinalis<\/jats:italic>. These data enhance the <jats:italic>Ogmocotyle<\/jats:italic> mt genome database and provide molecular resources for further studies of Pronocephalata taxonomy, population genetics and systematics.<\/jats:p>","DOI":"10.1017\/s0031182023000379","type":"journal-article","created":{"date-parts":[[2023,4,13]],"date-time":"2023-04-13T08:49:01Z","timestamp":1681375741000},"page":"661-671","update-policy":"https:\/\/doi.org\/10.1017\/policypage","source":"Crossref","is-referenced-by-count":8,"title":["The complete mitochondrial genome of <i>Ogmocotyle ailuri<\/i>: gene content, composition and rearrangement and phylogenetic 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