{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,4]],"date-time":"2026-09-04T22:14:26Z","timestamp":1788560066750,"version":"build-2803163510"},"reference-count":0,"publisher":"Cambridge University Press (CUP)","license":[{"start":{"date-parts":[[2020,2,13]],"date-time":"2020-02-13T00:00:00Z","timestamp":1581552000000},"content-version":"unspecified","delay-in-days":43,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Epidemiol. Infect."],"published-print":{"date-parts":[[2020]]},"abstract":"<jats:title>Abstract<\/jats:title>\n\t  <jats:p>In June 2017, an outbreak of S<jats:italic>almonella<\/jats:italic> Kottbus infection was suspected in Germany. We investigated the outbreak with whole-genome sequencing (WGS) and a case\u2013control study. Forty-six isolates from 69 cases were subtyped. Three WGS clusters were identified: cluster 1 (<jats:italic>n<\/jats:italic> = 36), cluster 2 (<jats:italic>n<\/jats:italic> = 5) and cluster 3 (<jats:italic>n<\/jats:italic> = 3). Compared to controls, cluster 1 cases more frequently consumed raw smoked ham (odds ratio (OR) 10, 95% confidence interval (CI) 1.2\u201388) bought at supermarket chain <jats:italic>X<\/jats:italic> (OR 36, 95% CI 4\u2013356; 9\/10 consumed ham <jats:italic>Y<\/jats:italic>). All four cluster 2 cases interviewed had consumed quail eggs. Timely WGS was invaluable in distinguishing concurrent outbreaks of a rare <jats:italic>Salmonella<\/jats:italic> serotype.<\/jats:p>","DOI":"10.1017\/s0950268820000394","type":"journal-article","created":{"date-parts":[[2020,2,13]],"date-time":"2020-02-13T05:28:20Z","timestamp":1581571700000},"source":"Crossref","is-referenced-by-count":8,"title":["Disentangling outbreaks using whole-genome sequencing: concurrent multistate outbreaks of <i>Salmonella<\/i> Kottbus in Germany, 2017"],"prefix":"10.1017","volume":"148","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6108-1498","authenticated-orcid":false,"given":"J.","family":"Enkelmann","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4010-1714","authenticated-orcid":false,"given":"A.","family":"von Laer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S.","family":"Simon","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"A.","family":"Fruth","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-0915-5968","authenticated-orcid":false,"given":"R.","family":"Lachmann","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"K.","family":"Michaelis","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"M.","family":"Borowiak","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S.","family":"Gillesberg Lassen","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"C.","family":"Frank","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"56","published-online":{"date-parts":[[2020,2,13]]},"container-title":["Epidemiology and Infection"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.cambridge.org\/core\/services\/aop-cambridge-core\/content\/view\/S0950268820000394","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,3,12]],"date-time":"2020-03-12T03:21:12Z","timestamp":1583983272000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.cambridge.org\/core\/product\/identifier\/S0950268820000394\/type\/journal_article"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020]]},"references-count":0,"alternative-id":["S0950268820000394"],"URL":"https:\/\/doi.org\/10.1017\/s0950268820000394","relation":{},"ISSN":["0950-2688","1469-4409"],"issn-type":[{"value":"0950-2688","type":"print"},{"value":"1469-4409","type":"electronic"}],"subject":[],"published":{"date-parts":[[2020]]},"article-number":"e51"}}