{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,3]],"date-time":"2026-09-03T11:40:06Z","timestamp":1788435606993,"version":"build-2803163510"},"reference-count":44,"publisher":"Cambridge University Press (CUP)","license":[{"start":{"date-parts":[[2022,10,31]],"date-time":"2022-10-31T00:00:00Z","timestamp":1667174400000},"content-version":"unspecified","delay-in-days":303,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/100006827","name":"Florida Department of Health","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100006827","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["cambridge.org"],"crossmark-restriction":true},"short-container-title":["Epidemiol. Infect."],"published-print":{"date-parts":[[2022]]},"abstract":"<jats:title>Abstract<\/jats:title>\n\t  <jats:p>Nontyphoidal salmonellosis is the leading reported foodborne illness in Florida. Although the diversity of <jats:italic>Salmonella<\/jats:italic> serotypes circulating in Florida has been identified, the geographical characteristics of the major serotypes are poorly described. Here we examined the geospatial patterns of 803 whole-genome sequenced <jats:italic>Salmonella<\/jats:italic> isolates within seven major serotypes (Enteritidis, Newport, Javiana, Sandiego, Braenderup, Typhimurium and I 4,[5],12:i:-) with the metadata obtained from Florida Department of Health during 2017\u20132018. Geographically, the distribution of incidence rates varied distinctively between serotypes. Illnesses with Enteritidis and Newport serotypes were widespread in Florida. The incidence rate for Javiana was relatively higher in the north compared to the south. Typhimurium was concentrated in the northwest, while I 4,[5],12:i:-, the monophasic variant of Typhimurium was limited to the south. We also evaluated space\u2013time clustering of isolates at the zip code level using scan statistic models. Space\u2013time clusters were detected for each major serotype during 2017\u20132018. The multinomial scan statistic found the risk of illness with Javiana was higher in the north and southwest in the fall of 2017 compared to other major serotypes. This serotype-specific clustering analysis will assist in further unpacking the associations between distinct reservoirs and illnesses with major serotypes in Florida.<\/jats:p>","DOI":"10.1017\/s0950268822001558","type":"journal-article","created":{"date-parts":[[2022,10,31]],"date-time":"2022-10-31T14:16:20Z","timestamp":1667225780000},"update-policy":"https:\/\/doi.org\/10.1017\/policypage","source":"Crossref","is-referenced-by-count":5,"title":["Geographical distribution and space\u2013time clustering of human illnesses with major <i>Salmonella<\/i> serotypes in Florida, USA, 2017\u20132018"],"prefix":"10.1017","volume":"150","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-8396-2912","authenticated-orcid":false,"given":"Xiaolong","family":"Li","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nitya","family":"Singh","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6456-5460","authenticated-orcid":false,"given":"Arie H.","family":"Havelaar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jason K.","family":"Blackburn","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"56","published-online":{"date-parts":[[2022,10,31]]},"reference":[{"key":"S0950268822001558_ref40","unstructured":"40. Centers for Disease Control and Prevention (2017) Human Salmonella Typhimurium infections linked to exposure to clinical and teaching microbiology laboratories. Available at https:\/\/www.cdc.gov\/salmonella\/typhimurium-07-17\/index.html (Accessed 15 March 2022)."},{"key":"S0950268822001558_ref16","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0235291"},{"key":"S0950268822001558_ref24","doi-asserted-by":"publisher","DOI":"10.1001\/jama.1980.03300380027016"},{"key":"S0950268822001558_ref19","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0147101"},{"key":"S0950268822001558_ref20","doi-asserted-by":"publisher","DOI":"10.4315\/JFP-20-138"},{"key":"S0950268822001558_ref23","doi-asserted-by":"publisher","DOI":"10.1097\/00001648-199411000-00010"},{"key":"S0950268822001558_ref28","doi-asserted-by":"publisher","DOI":"10.15585\/mmwr.mm6525a3"},{"key":"S0950268822001558_ref1","doi-asserted-by":"publisher","DOI":"10.1016\/j.pedneo.2013.01.010"},{"key":"S0950268822001558_ref6","doi-asserted-by":"publisher","DOI":"10.3389\/fpubh.2020.603005"},{"key":"S0950268822001558_ref31","doi-asserted-by":"publisher","DOI":"10.3201\/eid2507.181453"},{"key":"S0950268822001558_ref33","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0222108"},{"key":"S0950268822001558_ref25","doi-asserted-by":"publisher","DOI":"10.1542\/peds.99.3.399"},{"key":"S0950268822001558_ref36","doi-asserted-by":"publisher","DOI":"10.1017\/S0950268809990586"},{"key":"S0950268822001558_ref42","volume-title":"An Atlas of Salmonella in the United States, 1968\u20132011: Laboratory-Based Enteric Disease Surveillance","year":"2013"},{"key":"S0950268822001558_ref43","doi-asserted-by":"publisher","DOI":"10.15585\/mmwr.mm6926a2"},{"key":"S0950268822001558_ref7","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0145416"},{"key":"S0950268822001558_ref30","doi-asserted-by":"publisher","DOI":"10.1186\/s40813-021-00214-1"},{"key":"S0950268822001558_ref17","doi-asserted-by":"publisher","DOI":"10.1111\/zph.12741"},{"key":"S0950268822001558_ref10","doi-asserted-by":"publisher","DOI":"10.3389\/fmed.2021.656827"},{"key":"S0950268822001558_ref18","unstructured":"18. Florida Department of Health (2016) Laboratory Reporting Guidelines for Reportable Diseases and Conditions in Florida."},{"key":"S0950268822001558_ref2","doi-asserted-by":"publisher","DOI":"10.1089\/fpd.2014.1746"},{"key":"S0950268822001558_ref13","doi-asserted-by":"publisher","DOI":"10.1016\/j.jiph.2017.06.002"},{"key":"S0950268822001558_ref14","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0142419"},{"key":"S0950268822001558_ref11","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0221225"},{"key":"S0950268822001558_ref5","doi-asserted-by":"publisher","DOI":"10.15585\/mmwr.mm6453a1"},{"key":"S0950268822001558_ref8","doi-asserted-by":"publisher","DOI":"10.1089\/fpd.2019.2641"},{"key":"S0950268822001558_ref34","doi-asserted-by":"publisher","DOI":"10.3201\/eid1104.040997"},{"key":"S0950268822001558_ref41","doi-asserted-by":"publisher","DOI":"10.1017\/S0950268819000724"},{"key":"S0950268822001558_ref35","first-page":"325","article-title":"Outbreaks of Salmonella infections associated with eating Roma tomatoes \u2013 United States and Canada, 2004","volume":"54","year":"2005","journal-title":"Morbidity and Mortality Weekly Report"},{"key":"S0950268822001558_ref27","first-page":"1149","article-title":"Turtle-associated salmonellosis, United States, 2006\u20132014","volume":"22","author":"Bosch","year":"2016","journal-title":"Emerging Infectious Diseases"},{"key":"S0950268822001558_ref3","doi-asserted-by":"publisher","DOI":"10.3201\/eid2701.200316"},{"key":"S0950268822001558_ref22","doi-asserted-by":"publisher","DOI":"10.1002\/sim.3951"},{"key":"S0950268822001558_ref4","doi-asserted-by":"publisher","DOI":"10.3201\/eid1701.P11101"},{"key":"S0950268822001558_ref9","doi-asserted-by":"publisher","DOI":"10.15585\/mmwr.mm6711a3"},{"key":"S0950268822001558_ref39","unstructured":"39. Centers for Disease Control and Prevention (2017) Multistate outbreaks of human Salmonella infections linked to live poultry in backyard flocks, 2017 (Final Update). Available at https:\/\/www.cdc.gov\/salmonella\/live-poultry-06-17\/index.html (Accessed 15 March 2022)."},{"key":"S0950268822001558_ref12","doi-asserted-by":"publisher","DOI":"10.1186\/1476-072X-8-58"},{"key":"S0950268822001558_ref44","unstructured":"44. U.S. Census Bureau (2021) QuickFacts \u2013 Florida. Available at https:\/\/www.census.gov\/quickfacts\/FL (Accessed 4 August 2022)."},{"key":"S0950268822001558_ref21","doi-asserted-by":"publisher","DOI":"10.1017\/S0950268810000713"},{"key":"S0950268822001558_ref32","unstructured":"32. United States Department of Agriculture (2017) Census of agriculture for Florida, 2017. Available at https:\/\/www.nass.usda.gov\/Publications\/AgCensus\/2017\/Full_Report\/Census_by_State\/Florida\/index.php (Accessed 15 October 2021)."},{"key":"S0950268822001558_ref38","doi-asserted-by":"publisher","DOI":"10.1017\/S0950268817001790"},{"key":"S0950268822001558_ref26","doi-asserted-by":"publisher","DOI":"10.1086\/381594"},{"key":"S0950268822001558_ref29","doi-asserted-by":"publisher","DOI":"10.1542\/peds.2015-1735"},{"key":"S0950268822001558_ref15","doi-asserted-by":"publisher","DOI":"10.1186\/s12889-015-2592-6"},{"key":"S0950268822001558_ref37","doi-asserted-by":"publisher","DOI":"10.1017\/S0950268803001638"}],"container-title":["Epidemiology and Infection"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.cambridge.org\/core\/services\/aop-cambridge-core\/content\/view\/S0950268822001558","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,10,31]],"date-time":"2022-10-31T14:16:28Z","timestamp":1667225788000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.cambridge.org\/core\/product\/identifier\/S0950268822001558\/type\/journal_article"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2022]]},"references-count":44,"alternative-id":["S0950268822001558"],"URL":"https:\/\/doi.org\/10.1017\/s0950268822001558","relation":{},"ISSN":["0950-2688","1469-4409"],"issn-type":[{"value":"0950-2688","type":"print"},{"value":"1469-4409","type":"electronic"}],"subject":[],"published":{"date-parts":[[2022]]},"assertion":[{"value":"Copyright \u00a9 The Author(s), 2022. Published by Cambridge University Press","name":"copyright","label":"Copyright","group":{"name":"copyright_and_licensing","label":"Copyright and Licensing"}},{"value":"This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http:\/\/creativecommons.org\/licenses\/by\/4.0\/), which permits unrestricted re-use, distribution and reproduction, provided the original article is properly cited.","name":"license","label":"License","group":{"name":"copyright_and_licensing","label":"Copyright and Licensing"}},{"value":"This content has been made available to all.","name":"free","label":"Free to read"}],"article-number":"e175"}}