{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,30]],"date-time":"2026-04-30T22:55:25Z","timestamp":1777589725267,"version":"3.51.4"},"reference-count":78,"publisher":"American Chemical Society (ACS)","issue":"24","license":[{"start":{"date-parts":[[2025,12,2]],"date-time":"2025-12-02T00:00:00Z","timestamp":1764633600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,12,2]],"date-time":"2025-12-02T00:00:00Z","timestamp":1764633600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2025,12,2]],"date-time":"2025-12-02T00:00:00Z","timestamp":1764633600000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-045"}],"funder":[{"DOI":"10.13039\/501100005046","name":"Heilongjiang Provincial Science and Technology Department","doi-asserted-by":"publisher","award":["PL2024F011"],"award-info":[{"award-number":["PL2024F011"]}],"id":[{"id":"10.13039\/501100005046","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"Ministry of Science and Technology of the People's Republic of China","doi-asserted-by":"publisher","award":["62172128"],"award-info":[{"award-number":["62172128"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J. Chem. Inf. Model."],"published-print":{"date-parts":[[2025,12,22]]},"DOI":"10.1021\/acs.jcim.5c02370","type":"journal-article","created":{"date-parts":[[2025,12,2]],"date-time":"2025-12-02T22:32:15Z","timestamp":1764714735000},"page":"13447-13464","source":"Crossref","is-referenced-by-count":1,"title":["MAGIC: A Multimodal Adaptive GRN Inference Constructor"],"prefix":"10.1021","volume":"65","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-4974-3054","authenticated-orcid":true,"given":"Dengju","family":"Yao","sequence":"first","affiliation":[{"name":"School of Computer Science and Technology","place":["Harbin, China"]},{"name":"Harbin University of Science and Technology","place":["Harbin, China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Binbin","family":"Zhang","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology","place":["Harbin, China"]},{"name":"Harbin University of Science and Technology","place":["Harbin, China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiaojuan","family":"Zhan","sequence":"additional","affiliation":[{"name":"College of Computer Science and Technology","place":["Harbin, China"]},{"name":"Heilongjiang Institute of Technology","place":["Harbin, China"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Wentao","family":"Wang","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology","place":["Harbin, China"]},{"name":"Harbin University of Science and Technology","place":["Harbin, China"]}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"316","published-online":{"date-parts":[[2025,12,2]]},"reference":[{"key":"ref1\/cit1","doi-asserted-by":"publisher","DOI":"10.1126\/science.1245316"},{"key":"ref2\/cit2","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.2859"},{"key":"ref3\/cit3","doi-asserted-by":"publisher","DOI":"10.1038\/s41540-023-00312-6"},{"key":"ref4\/cit4","doi-asserted-by":"publisher","DOI":"10.1002\/advs.202415678"},{"key":"ref5\/cit5","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1911536116"},{"key":"ref6\/cit6","doi-asserted-by":"publisher","DOI":"10.1109\/JBHI.2024.3476490"},{"key":"ref7\/cit7","doi-asserted-by":"publisher","DOI":"10.1016\/j.crmeth.2025.101026"},{"key":"ref8\/cit8","doi-asserted-by":"publisher","DOI":"10.1101\/gr.240663.118"},{"key":"ref9\/cit9","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.2016"},{"key":"ref10\/cit10","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0012776"},{"key":"ref11\/cit11","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bty916"},{"key":"ref12\/cit12","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btx194"},{"key":"ref13\/cit13","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa032"},{"key":"ref14\/cit14","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gku1315"},{"key":"ref15\/cit15","doi-asserted-by":"publisher","DOI":"10.1016\/j.copbio.2019.12.002"},{"key":"ref16\/cit16","doi-asserted-by":"publisher","DOI":"10.1038\/s41587-024-02182-7"},{"key":"ref17\/cit17","doi-asserted-by":"publisher","DOI":"10.1101\/gr.277488.122"},{"key":"ref18\/cit18","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btx575"},{"key":"ref19\/cit19","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbab568"},{"key":"ref20\/cit20","doi-asserted-by":"publisher","DOI":"10.1016\/j.isci.2024.109352"},{"key":"ref21\/cit21","doi-asserted-by":"publisher","DOI":"10.1002\/advs.202409990"},{"key":"ref22\/cit22","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac559"},{"key":"ref23\/cit23","doi-asserted-by":"publisher","DOI":"10.1016\/j.engappai.2024.108938"},{"key":"ref24\/cit24","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1010942"},{"key":"ref25\/cit25","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbae526"},{"key":"ref26\/cit26","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaf074"},{"key":"ref27\/cit27","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbaf359"},{"key":"ref28\/cit28","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbaf349"},{"key":"ref29\/cit29","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbae662"},{"key":"ref30\/cit30","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbad529"},{"key":"ref31\/cit31","doi-asserted-by":"publisher","DOI":"10.1038\/s43588-021-00099-8"},{"key":"ref32\/cit32","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-019-0690-6"},{"key":"ref33\/cit33","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevE.73.026120"},{"key":"ref34\/cit34","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkad1059"},{"key":"ref35\/cit35","doi-asserted-by":"publisher","DOI":"10.1038\/s12276-025-01415-2"},{"key":"ref36\/cit36","doi-asserted-by":"publisher","DOI":"10.1016\/j.omtn.2019.12.023"},{"key":"ref37\/cit37","doi-asserted-by":"publisher","DOI":"10.18632\/oncotarget.25456"},{"key":"ref38\/cit38","doi-asserted-by":"publisher","DOI":"10.3390\/ijms24032652"},{"key":"ref39\/cit39","doi-asserted-by":"publisher","DOI":"10.1093\/carcin\/21.3.405"},{"key":"ref40\/cit40","doi-asserted-by":"publisher","DOI":"10.1016\/j.gpb.2019.09.006"},{"key":"ref41\/cit41","doi-asserted-by":"publisher","DOI":"10.1186\/s12943-018-0915-9"},{"key":"ref42\/cit42","doi-asserted-by":"publisher","DOI":"10.1186\/s12943-021-01424-5"},{"key":"ref43\/cit43","doi-asserted-by":"publisher","DOI":"10.3390\/cancers14174314"},{"key":"ref44\/cit44","doi-asserted-by":"publisher","DOI":"10.1038\/s41420-024-01990-9"},{"key":"ref45\/cit45","doi-asserted-by":"publisher","DOI":"10.3389\/fonc.2020.553399"},{"key":"ref46\/cit46","doi-asserted-by":"publisher","DOI":"10.1038\/s12276-024-01315-x"},{"key":"ref47\/cit47","doi-asserted-by":"publisher","DOI":"10.1038\/ng.730"},{"key":"ref48\/cit48","doi-asserted-by":"publisher","DOI":"10.1038\/s41388-019-0873-8"},{"key":"ref49\/cit49","doi-asserted-by":"publisher","DOI":"10.1186\/s13058-018-1046-3"},{"key":"ref50\/cit50","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0070096"},{"key":"ref51\/cit51","doi-asserted-by":"publisher","DOI":"10.1007\/s10911-020-09448-1"},{"key":"ref52\/cit52","doi-asserted-by":"publisher","DOI":"10.1186\/1476-4598-7-49"},{"key":"ref53\/cit53","doi-asserted-by":"publisher","DOI":"10.1038\/onc.2012.526"},{"key":"ref54\/cit54","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkae208"},{"key":"ref55\/cit55","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-024-53982-z"},{"key":"ref56\/cit56","doi-asserted-by":"publisher","DOI":"10.1038\/s42256-024-00851-5"},{"key":"ref57\/cit57","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-025-56526-1"},{"key":"ref58\/cit58","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1011344"},{"key":"ref59\/cit59","doi-asserted-by":"publisher","DOI":"10.1186\/s12864-025-11511-2"},{"key":"ref60\/cit60","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbaf289"},{"key":"ref61\/cit61","doi-asserted-by":"publisher","DOI":"10.1093\/bib\/bbaf009"},{"key":"ref62\/cit62","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-024-03338-z"},{"key":"ref63\/cit63","doi-asserted-by":"publisher","DOI":"10.1109\/JBHI.2025.3595904"},{"key":"ref64\/cit64","doi-asserted-by":"publisher","DOI":"10.1016\/j.inffus.2025.103016"},{"key":"ref65\/cit65","doi-asserted-by":"publisher","DOI":"10.1016\/j.future.2024.05.030"},{"key":"ref66\/cit66","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1012399"},{"key":"ref67\/cit67","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gky1131"},{"key":"ref68\/cit68","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkx1013"},{"key":"ref69\/cit69","doi-asserted-by":"publisher","DOI":"10.1093\/database\/bav095"},{"key":"ref70\/cit70","doi-asserted-by":"publisher","DOI":"10.15252\/embr.201846255"},{"key":"ref71\/cit71","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-020-2493-4"},{"key":"ref72\/cit72","doi-asserted-by":"publisher","DOI":"10.1093\/database\/bat045"},{"key":"ref73\/cit73","doi-asserted-by":"publisher","DOI":"10.1126\/science.1132292"},{"key":"ref74\/cit74","doi-asserted-by":"publisher","DOI":"10.1038\/nature11247"},{"key":"ref75\/cit75","unstructured":"Ouyang, S.\n                      MMSite: a multi-modal framework for the identification of active sites in proteins\n                      ; 2025."},{"key":"ref76\/cit76","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-021-22197-x"},{"key":"ref77\/cit77","doi-asserted-by":"publisher","DOI":"10.1126\/science.1075090"},{"key":"ref78\/cit78","doi-asserted-by":"publisher","DOI":"10.1038\/msb4100129"}],"container-title":["Journal of Chemical Information and Modeling"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/pubs.acs.org\/doi\/pdf\/10.1021\/acs.jcim.5c02370","content-type":"application\/pdf","content-version":"vor","intended-application":"unspecified"},{"URL":"https:\/\/pubs.acs.org\/doi\/pdf\/10.1021\/acs.jcim.5c02370","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,1,16]],"date-time":"2026-01-16T10:56:17Z","timestamp":1768560977000},"score":1,"resource":{"primary":{"URL":"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.jcim.5c02370"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,12,2]]},"references-count":78,"journal-issue":{"issue":"24","published-print":{"date-parts":[[2025,12,22]]}},"alternative-id":["10.1021\/acs.jcim.5c02370"],"URL":"https:\/\/doi.org\/10.1021\/acs.jcim.5c02370","relation":{},"ISSN":["1549-9596","1549-960X"],"issn-type":[{"value":"1549-9596","type":"print"},{"value":"1549-960X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,12,2]]}}}