{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,5,31]],"date-time":"2024-05-31T09:14:46Z","timestamp":1717146886174},"reference-count":39,"publisher":"American Chemical Society (ACS)","issue":"1","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J. Chem. Inf. Model."],"published-print":{"date-parts":[[2008,1,1]]},"DOI":"10.1021\/ci700306s","type":"journal-article","created":{"date-parts":[[2008,1,1]],"date-time":"2008-01-01T10:00:43Z","timestamp":1199181643000},"page":"148-156","source":"Crossref","is-referenced-by-count":4,"title":["Improvement of Protein-Compound Docking Scores by Using Amino-Acid Sequence Similarities of Proteins"],"prefix":"10.1021","volume":"48","author":[{"given":"Yoshifumi","family":"Fukunishi","sequence":"first","affiliation":[{"name":"Biological Information Research Center (BIRC), National Institute of Advanced Industrial Science and Technology (AIST), 2-41-6, Aomi, Koto-ku, Tokyo 135-0064, Japan, Pharmaceutical Innovation Value Chain, BioGrid Center Kansai, 1-4-2 Shinsenri-Higashimachi, Toyonaka, Osaka 560-0082, Japan, and Institute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka 565-0871, Japan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Haruki","family":"Nakamura","sequence":"additional","affiliation":[{"name":"Biological Information Research Center (BIRC), National Institute of Advanced Industrial Science and Technology (AIST), 2-41-6, Aomi, Koto-ku, Tokyo 135-0064, Japan, Pharmaceutical Innovation Value Chain, BioGrid Center Kansai, 1-4-2 Shinsenri-Higashimachi, Toyonaka, Osaka 560-0082, Japan, and Institute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka 565-0871, Japan"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"316","published-online":{"date-parts":[[2008,1,1]]},"reference":[{"key":"ci700306sb00001\/ci700306sb00001_1","doi-asserted-by":"crossref","first-page":"996","DOI":"10.1038\/nrd2199","volume":"5","author":"Overington J. P.","year":"2006","journal-title":"Nat. Rev. Drug Discovery"},{"key":"ci700306sb00002\/ci700306sb00002_1","doi-asserted-by":"crossref","first-page":"547","DOI":"10.1021\/jm000386o","volume":"44","author":"Orita M.","year":"2001","journal-title":"J. Med. Chem."},{"key":"ci700306sb00003\/ci700306sb00003_1","doi-asserted-by":"crossref","first-page":"643","DOI":"10.1002\/prot.20473","volume":"60","author":"Cotesta S.","year":"2005","journal-title":"Proteins"},{"key":"ci700306sb00004\/ci700306sb00004_1","doi-asserted-by":"crossref","first-page":"517","DOI":"10.1002\/prot.20217","volume":"57","author":"Schellhammer I.","year":"2004","journal-title":"Proteins"},{"key":"ci700306sb00005\/ci700306sb00005_1","first-page":"5465","volume":"48","author":"Evers A.","year":"2005","journal-title":"J. Med. Chem."},{"key":"ci700306sb00006\/ci700306sb00006_1","doi-asserted-by":"crossref","first-page":"6672","DOI":"10.1021\/jm049222o","volume":"47","author":"Howard M. H.","year":"2004","journal-title":"J. Med. Chem."},{"key":"ci700306sb00007\/ci700306sb00007_1","doi-asserted-by":"crossref","first-page":"5611","DOI":"10.1021\/jm049505g","volume":"47","author":"Godden J. W.","year":"2004","journal-title":"J. Med. Chem."},{"key":"ci700306sb00008\/ci700306sb00008_1","first-page":"3466","volume":"48","author":"Zhao L.","year":"2005","journal-title":"J. Med. Chem."},{"key":"ci700306sb00009\/ci700306sb00009_1","doi-asserted-by":"crossref","first-page":"3444","DOI":"10.1021\/jm034078c","volume":"46","author":"Mestres J.","year":"2003","journal-title":"J. Med. Chem."},{"key":"ci700306sb00010\/ci700306sb00010_1","doi-asserted-by":"crossref","first-page":"86","DOI":"10.1002\/prot.20195","volume":"57","author":"Shacham S.","year":"2004","journal-title":"Proteins"},{"key":"ci700306sb00011\/ci700306sb00011_1","doi-asserted-by":"crossref","first-page":"433","DOI":"10.1002\/prot.10362","volume":"51","author":"Cavasotto C. N.","year":"2003","journal-title":"Proteins"},{"key":"ci700306sb00012\/ci700306sb00012_1","doi-asserted-by":"crossref","first-page":"1815","DOI":"10.1523\/JNEUROSCI.4723-04.2005","volume":"25","author":"Katada S.","year":"2005","journal-title":"J. Neurosci."},{"key":"ci700306sb00013\/ci700306sb00013_1","doi-asserted-by":"crossref","first-page":"5931","DOI":"10.1021\/jm050362n","volume":"49","author":"Warren G. L.","year":"2006","journal-title":"J. Med. Chem."},{"key":"ci700306sb00014\/ci700306sb00014_1","doi-asserted-by":"crossref","first-page":"22","DOI":"10.1002\/jcc.20141","volume":"26","author":"Kontoyianni M.","year":"2005","journal-title":"J. Comput. Chem."},{"key":"ci700306sb00015\/ci700306sb00015_1","doi-asserted-by":"crossref","first-page":"288","DOI":"10.1016\/0022-2836(82)90153-X","volume":"161","author":"Kuntz I. D.","year":"1982","journal-title":"J. Mol. Biol."},{"key":"ci700306sb00016\/ci700306sb00016_1","doi-asserted-by":"crossref","first-page":"489","DOI":"10.1006\/jmbi.1996.0477","volume":"261","author":"Rarey M.","year":"1996","journal-title":"J. Mol. Biol."},{"key":"ci700306sb00017\/ci700306sb00017_1","doi-asserted-by":"crossref","first-page":"748","DOI":"10.1006\/jmbi.1996.0897","volume":"267","author":"Jones G.","year":"1997","journal-title":"J. Mol. Biol."},{"key":"ci700306sb00018\/ci700306sb00018_1","doi-asserted-by":"crossref","first-page":"382","DOI":"10.1002\/(SICI)1097-0134(19981115)33:3<367::AID-PROT6>3.0.CO;2-W","volume":"33","author":"Baxter C. A.","year":"1998","journal-title":"Proteins"},{"key":"ci700306sb00019\/ci700306sb00019_1","doi-asserted-by":"crossref","first-page":"45","DOI":"10.1016\/j.jmgm.2005.04.004","volume":"24","author":"Fukunishi Y.","year":"2005","journal-title":"J. Mol. Graphics Modell."},{"key":"ci700306sb00020\/ci700306sb00020_1","first-page":"2335","volume":"48","author":"Zhang C.","year":"2005","journal-title":"J. Med. Chem."},{"key":"ci700306sb00021\/ci700306sb00021_1","first-page":"804","volume":"42","author":"Muegge I.","year":"1999","journal-title":"J. Med. Chem."},{"key":"ci700306sb00022\/ci700306sb00022_1","first-page":"89","volume":"47","author":"Vigers G. P. A.","year":"2004","journal-title":"J. Med. Chem."},{"key":"ci700306sb00023\/ci700306sb00023_1","first-page":"70","volume":"25","author":"Fukunishi Y.","year":"2005","journal-title":"J. Mol. Graphics Modell."},{"key":"ci700306sb00024\/ci700306sb00024_1","first-page":"2084","volume":"46","author":"Fukunishi Y.","year":"2006","journal-title":"J. Chem. Inf. Model."},{"key":"ci700306sb00025\/ci700306sb00025_1","doi-asserted-by":"crossref","first-page":"3408","DOI":"10.1021\/jm950800y","volume":"39","author":"Briem H.","year":"1996","journal-title":"J. Med. Chem."},{"key":"ci700306sb00026\/ci700306sb00026_1","doi-asserted-by":"crossref","first-page":"253","DOI":"10.1021\/ci990439e","volume":"40","author":"Lessel U. F.","year":"2000","journal-title":"J. Chem. Inf. Comput. Sci."},{"key":"ci700306sb00027\/ci700306sb00027_1","doi-asserted-by":"crossref","first-page":"244","DOI":"10.1023\/A:1008793325522","volume":"20","author":"Briem H.","year":"2000","journal-title":"Perspect. Drug Discovery Des."},{"key":"ci700306sb00028\/ci700306sb00028_1","doi-asserted-by":"crossref","first-page":"533","DOI":"10.1021\/jm050480a","volume":"49","author":"Fukunishi Y.","year":"2006","journal-title":"J. Med. Chem."},{"key":"ci700306sb00029\/ci700306sb00029_1","doi-asserted-by":"crossref","first-page":"118","DOI":"10.1016\/1074-5521(95)90283-X","volume":"2","author":"Kauvar L. M.","year":"1995","journal-title":"Chem. Biol."},{"key":"ci700306sb00030\/ci700306sb00030_1","first-page":"22","volume":"46","author":"Fukunishi","year":"2006","journal-title":"J. Chem. Inf. Comput. Sci."},{"key":"ci700306sb00031\/ci700306sb00031_1","doi-asserted-by":"crossref","first-page":"2448","DOI":"10.1073\/pnas.85.8.2444","volume":"85","author":"Pearson W. R.","year":"1988","journal-title":"Proc. Natl. Acad. Sci. U.S.A."},{"key":"ci700306sb00032\/ci700306sb00032_1","first-page":"98","volume":"183","author":"Pearson W. R","year":"1990","journal-title":"Methods Enzymol."},{"key":"ci700306sb00033\/ci700306sb00033_1","first-page":"471","volume":"49","author":"Nissink J. W. M.","year":"2002","journal-title":"Proteins"},{"key":"ci700306sb00034\/ci700306sb00034_1","doi-asserted-by":"crossref","first-page":"3228","DOI":"10.1016\/0040-4020(80)80168-2","volume":"36","author":"Gasteiger J.","year":"1980","journal-title":"Tetrahedron"},{"key":"ci700306sb00035\/ci700306sb00035_1","first-page":"3184","volume":"3181","author":"Gasteiger J.","year":"1978","journal-title":"Tetrahedron Lett."},{"key":"ci700306sb00036\/ci700306sb00036_1","unstructured":"Case, D. A.; Darden, T. A.; Cheatham, T. E., III.; Simmerling, C. L.; Wang, J.; Duke, R. E.; Luo, R.; Merz, K. M.; Wang, B.; Pearlman, D. A.; Crowley, M.; Brozell, S.; Tsui, V.; Gohlke, H.; Mongan, J.; Hornak, V.; Cui, G.; Beroza, P.; Schafmeister, C.; Caldwell, J. W.; Ross, W.S.; Kollman, P. A.AMBER 8; University of California:\u2009 San Francisco, CA, 2004."},{"key":"ci700306sb00037\/ci700306sb00037_1","volume-title":"Proceedings of the 2nd International Symposium on Portable Synchrotron Light Sources and Advanced Applications","author":"Inoue T.","year":"2007"},{"key":"ci700306sb00038\/ci700306sb00038_1","volume-title":"Comb. Chem. High Throughput Screening","author":"Fukunishi Y.","year":"2007"},{"key":"ci700306sb00039\/ci700306sb00039_1","first-page":"1610","volume":"10","author":"Russ A. P.","year":"2005","journal-title":"Drug Discovery Today"}],"container-title":["Journal of Chemical Information and Modeling"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/pubs.acs.org\/doi\/pdf\/10.1021\/ci700306s","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,3,6]],"date-time":"2023-03-06T01:06:06Z","timestamp":1678064766000},"score":1,"resource":{"primary":{"URL":"https:\/\/pubs.acs.org\/doi\/10.1021\/ci700306s"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2008,1,1]]},"references-count":39,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2008,1,1]]}},"alternative-id":["10.1021\/ci700306s"],"URL":"https:\/\/doi.org\/10.1021\/ci700306s","relation":{},"ISSN":["1549-9596","1549-960X"],"issn-type":[{"value":"1549-9596","type":"print"},{"value":"1549-960X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2008,1,1]]}}}