{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,27]],"date-time":"2026-05-27T14:03:32Z","timestamp":1779890612436,"version":"3.53.1"},"reference-count":84,"publisher":"American Chemical Society (ACS)","issue":"12","license":[{"start":{"date-parts":[[2025,2,12]],"date-time":"2025-02-12T00:00:00Z","timestamp":1739318400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,2,12]],"date-time":"2025-02-12T00:00:00Z","timestamp":1739318400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2025,2,12]],"date-time":"2025-02-12T00:00:00Z","timestamp":1739318400000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-045"}],"funder":[{"DOI":"10.13039\/501100008804","name":"Ministry of Science and Technology, Government of the People?s Republic of Bangladesh","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100008804","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J. Phys. Chem. B"],"published-print":{"date-parts":[[2025,3,27]]},"DOI":"10.1021\/acs.jpcb.4c07758","type":"journal-article","created":{"date-parts":[[2025,2,12]],"date-time":"2025-02-12T15:26:46Z","timestamp":1739374006000},"page":"3171-3182","source":"Crossref","is-referenced-by-count":7,"title":["Investigating the Therapeutic Ability of Novel Antimicrobial Peptide Dendropsophin 1 and Its Analogues through Membrane Disruption and Monomeric Pore Formation"],"prefix":"10.1021","volume":"129","author":[{"ORCID":"https:\/\/orcid.org\/0009-0002-6615-4486","authenticated-orcid":true,"given":"Fahmida","family":"Rahman","sequence":"first","affiliation":[{"name":"Department of Physics","place":["Barishal, Bangladesh"]},{"name":"University of Barishal","place":["Barishal, Bangladesh"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0001-0826-6765","authenticated-orcid":true,"given":"Sujit","family":"Halder","sequence":"additional","affiliation":[{"name":"Department of Physics","place":["Barishal, Bangladesh"]},{"name":"University of Barishal","place":["Barishal, Bangladesh"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0003-6512-8726","authenticated-orcid":true,"given":"Shamo","family":"Rahman","sequence":"additional","affiliation":[{"name":"Department of Physics","place":["Barishal, Bangladesh"]},{"name":"University of Barishal","place":["Barishal, Bangladesh"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6059-3501","authenticated-orcid":true,"given":"Md Lokman","family":"Hossen","sequence":"additional","affiliation":[{"name":"Department of Physics","place":["Barishal, Bangladesh"]},{"name":"University of Barishal","place":["Barishal, Bangladesh"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"316","published-online":{"date-parts":[[2025,2,12]]},"reference":[{"key":"ref1\/cit1","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkv484"},{"key":"ref2\/cit2","volume-title":"StatPearls","author":"Patel P.","year":"2023"},{"key":"ref3\/cit3","first-page":"277","volume":"40","author":"Ventola C. L.","year":"2015","journal-title":"Pharm. Ther."},{"key":"ref4\/cit4","doi-asserted-by":"publisher","DOI":"10.1007\/82_2016_492"},{"key":"ref5\/cit5","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2013.00047"},{"key":"ref6\/cit6","doi-asserted-by":"publisher","DOI":"10.4314\/mmj.v15i2.10780"},{"key":"ref7\/cit7","doi-asserted-by":"publisher","DOI":"10.1080\/1040841X.2024.2313024"},{"key":"ref8\/cit8","first-page":"3919","volume":"11","author":"Lei J.","year":"2019","journal-title":"Am. J. Transl. Res."},{"key":"ref9\/cit9","doi-asserted-by":"publisher","DOI":"10.1186\/s40779-021-00343-2"},{"key":"ref10\/cit10","volume-title":"StatPearls","author":"Forbes J.","year":"2023"},{"key":"ref11\/cit11","doi-asserted-by":"publisher","DOI":"10.1016\/j.cub.2015.11.017"},{"key":"ref12\/cit12","doi-asserted-by":"publisher","DOI":"10.1089\/mdr.2017.0392"},{"key":"ref13\/cit13","doi-asserted-by":"publisher","DOI":"10.1021\/bi0001170"},{"key":"ref14\/cit14","doi-asserted-by":"publisher","DOI":"10.1126\/science.1129818"},{"key":"ref15\/cit15","doi-asserted-by":"publisher","DOI":"10.1039\/C9CP01558B"},{"key":"ref16\/cit16","doi-asserted-by":"publisher","DOI":"10.1152\/ajpregu.00490.2004"},{"key":"ref17\/cit17","volume-title":"Medical Microbiology","author":"Neu H. C.","year":"1996"},{"key":"ref18\/cit18","doi-asserted-by":"publisher","DOI":"10.1086\/319370"},{"key":"ref19\/cit19","doi-asserted-by":"publisher","DOI":"10.1080\/14786419.2017.1346646"},{"key":"ref20\/cit20","unstructured":"F., Castro-Herrera; F., Vargas-Salinas. Anfibios y reptiles en el departamento del Valle del Cauca, Colombia | Biota Colombiana. https:\/\/revistas.humboldt.org.co\/index.php\/biota\/article\/view\/203 (2008). (Accessed: July 16, 2024)."},{"key":"ref21\/cit21","doi-asserted-by":"publisher","DOI":"10.1038\/msb.2011.75"},{"key":"ref22\/cit22","doi-asserted-by":"publisher","DOI":"10.3390\/biom8030045"},{"key":"ref23\/cit23","first-page":"354","volume":"98","author":"Phillips J.","year":"2018","journal-title":"Am. Fam. Physician"},{"key":"ref24\/cit24","doi-asserted-by":"publisher","DOI":"10.1016\/j.neuron.2018.08.011"},{"key":"ref25\/cit25","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.00490-06"},{"key":"ref26\/cit26","doi-asserted-by":"publisher","DOI":"10.3389\/fmedt.2020.610997"},{"key":"ref27\/cit27","doi-asserted-by":"publisher","DOI":"10.1038\/cr.2017.133"},{"key":"ref28\/cit28","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.66.7.2829-2834.2000"},{"key":"ref29\/cit29","doi-asserted-by":"publisher","DOI":"10.1002\/bip.360221211"},{"key":"ref30\/cit30","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkq1105"},{"key":"ref31\/cit31","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jctc.6b00265"},{"key":"ref32\/cit32","doi-asserted-by":"publisher","DOI":"10.1021\/cb1001558"},{"key":"ref33\/cit33","doi-asserted-by":"publisher","DOI":"10.1529\/biophysj.108.136655"},{"key":"ref34\/cit34","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gky427"},{"key":"ref35\/cit35","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-021-03819-2"},{"key":"ref36\/cit36","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.20945"},{"key":"ref37\/cit37","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.23702"},{"key":"ref38\/cit38","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jctc.2c01246"},{"key":"ref39\/cit39","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jcim.2c00437"},{"key":"ref40\/cit40","doi-asserted-by":"publisher","DOI":"10.1038\/srep01678"},{"key":"ref41\/cit41","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btt055"},{"key":"ref42\/cit42","doi-asserted-by":"publisher","unstructured":"Abraham, M.GROMACS 2024.2 Manual 2024 10.5281\/zenodo.11148638.","DOI":"10.5281\/zenodo.11148638"},{"key":"ref43\/cit43","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.23354"},{"key":"ref44\/cit44","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.21367"},{"key":"ref45\/cit45","doi-asserted-by":"publisher","DOI":"10.1021\/ct900275y"},{"key":"ref46\/cit46","doi-asserted-by":"publisher","DOI":"10.1002\/(SICI)1096-987X(199709)18:12<1463::AID-JCC4>3.0.CO;2-H"},{"key":"ref47\/cit47","doi-asserted-by":"publisher","DOI":"10.13140\/RG.2.1.4680.4960"},{"key":"ref48\/cit48","doi-asserted-by":"publisher","DOI":"10.1063\/1.448118"},{"key":"ref49\/cit49","doi-asserted-by":"publisher","DOI":"10.1063\/1.449071"},{"key":"ref50\/cit50","doi-asserted-by":"publisher","DOI":"10.1063\/1.328693"},{"key":"ref51\/cit51","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0039918"},{"key":"ref52\/cit52","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jcim.2c01574"},{"key":"ref53\/cit53","doi-asserted-by":"publisher","DOI":"10.1080\/002068970500044749"},{"key":"ref54\/cit54","doi-asserted-by":"publisher","DOI":"10.1002\/qua.26555"},{"key":"ref55\/cit55","doi-asserted-by":"publisher","DOI":"10.1016\/0263-7855(96)00018-5"},{"key":"ref56\/cit56","unstructured":"Lilkova, E. The PyMOL Molecular Graphics System, Version 2.0 Schr\u00f6dinger, LLC. https:\/\/pymol.org\/2\/ (2015). (Accessed: January 07, 2024)."},{"key":"ref57\/cit57","doi-asserted-by":"publisher","DOI":"10.1016\/j.crstbi.2020.11.002"},{"key":"ref58\/cit58","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-61779-588-6_10"},{"key":"ref59\/cit59","doi-asserted-by":"publisher","DOI":"10.1006\/jmbi.1994.1017"},{"key":"ref60\/cit60","doi-asserted-by":"publisher","DOI":"10.1038\/s42004-024-01114-5"},{"key":"ref61\/cit61","doi-asserted-by":"publisher","DOI":"10.1002\/pro.4843"},{"key":"ref62\/cit62","doi-asserted-by":"publisher","DOI":"10.3390\/pathogens13010010"},{"key":"ref63\/cit63","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jctc.7b00028"},{"key":"ref64\/cit64","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevLett.91.188102"},{"key":"ref65\/cit65","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-020-58730-z"},{"key":"ref66\/cit66","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0119264"},{"key":"ref67\/cit67","unstructured":"Barnett, C.; Senapathi, T.; Bray, S.; Gou\u00e9, N. Hands-on: Hands-on: Analysis of molecular dynamics simulations. Galaxy Training Network https:\/\/training.galaxyproject.org\/training-material\/topics\/computational-chemistry\/tutorials\/analysis-md-simulations\/tutorial.html."},{"key":"ref68\/cit68","unstructured":"Turner, P. J. XMGRACE. Center for Coastal and Land-Margin Research, Oregon Graduate Institute of Science and Technology, Beaverton, OR. Version 5.1.19, (2005)."},{"key":"ref69\/cit69","doi-asserted-by":"publisher","DOI":"10.1021\/jp507289w"},{"key":"ref70\/cit70","doi-asserted-by":"publisher","DOI":"10.1016\/j.memsci.2020.117921"},{"key":"ref71\/cit71","doi-asserted-by":"publisher","DOI":"10.1016\/j.bpj.2021.07.016"},{"key":"ref72\/cit72","doi-asserted-by":"publisher","DOI":"10.1063\/1.5026744"},{"key":"ref73\/cit73","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jpclett.7b02324"},{"key":"ref74\/cit74","doi-asserted-by":"publisher","DOI":"10.2174\/1568026615666150703121700"},{"key":"ref75\/cit75","doi-asserted-by":"publisher","DOI":"10.1016\/j.apsb.2021.07.014"},{"key":"ref76\/cit76","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jpcb.1c01954"},{"key":"ref77\/cit77","doi-asserted-by":"publisher","DOI":"10.3390\/pharmaceutics15102399"},{"key":"ref78\/cit78","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbamem.2008.06.007"},{"key":"ref79\/cit79","doi-asserted-by":"publisher","DOI":"10.1021\/jacs.8b11939"},{"key":"ref80\/cit80","unstructured":"Dennison, S. R.; Morton, L. H. G.; Phoenix, D. A. Effect of Amidation on the Antimicrobial Peptide Aurein 2.5 from Australian Southern Bell Frogs. http:\/\/www.eurekaselect.com."},{"key":"ref81\/cit81","doi-asserted-by":"publisher","DOI":"10.1016\/j.molliq.2024.123948"},{"key":"ref82\/cit82","doi-asserted-by":"publisher","DOI":"10.1021\/la303570u"},{"key":"ref83\/cit83","doi-asserted-by":"publisher","DOI":"10.1063\/1.4902237"},{"key":"ref84\/cit84","doi-asserted-by":"publisher","DOI":"10.1021\/bi00197a034"}],"container-title":["The Journal of Physical Chemistry B"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/pubs.acs.org\/doi\/pdf\/10.1021\/acs.jpcb.4c07758","content-type":"application\/pdf","content-version":"vor","intended-application":"unspecified"},{"URL":"https:\/\/pubs.acs.org\/doi\/pdf\/10.1021\/acs.jpcb.4c07758","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,3,27]],"date-time":"2025-03-27T10:18:09Z","timestamp":1743070689000},"score":1,"resource":{"primary":{"URL":"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.jpcb.4c07758"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,2,12]]},"references-count":84,"journal-issue":{"issue":"12","published-print":{"date-parts":[[2025,3,27]]}},"alternative-id":["10.1021\/acs.jpcb.4c07758"],"URL":"https:\/\/doi.org\/10.1021\/acs.jpcb.4c07758","relation":{},"ISSN":["1520-6106","1520-5207"],"issn-type":[{"value":"1520-6106","type":"print"},{"value":"1520-5207","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,2,12]]}}}