{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,11,5]],"date-time":"2026-11-05T04:56:45Z","timestamp":1793854605411,"version":"4.6.1"},"reference-count":40,"publisher":"American Chemical Society (ACS)","issue":"5","license":[{"start":{"date-parts":[[2025,3,31]],"date-time":"2025-03-31T00:00:00Z","timestamp":1743379200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-029"},{"start":{"date-parts":[[2025,3,31]],"date-time":"2025-03-31T00:00:00Z","timestamp":1743379200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-037"},{"start":{"date-parts":[[2025,3,31]],"date-time":"2025-03-31T00:00:00Z","timestamp":1743379200000},"content-version":"stm-asf","delay-in-days":0,"URL":"https:\/\/doi.org\/10.15223\/policy-045"}],"funder":[{"DOI":"10.13039\/501100001665","name":"Agence Nationale de la Recherche","doi-asserted-by":"publisher","award":["ANR-10-INBS-08"],"award-info":[{"award-number":["ANR-10-INBS-08"]}],"id":[{"id":"10.13039\/501100001665","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001665","name":"Agence Nationale de la Recherche","doi-asserted-by":"publisher","award":["ANR-17-EURE-0003"],"award-info":[{"award-number":["ANR-17-EURE-0003"]}],"id":[{"id":"10.13039\/501100001665","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001665","name":"Agence Nationale de la Recherche","doi-asserted-by":"publisher","award":["ANR-2022-CE12-0033"],"award-info":[{"award-number":["ANR-2022-CE12-0033"]}],"id":[{"id":"10.13039\/501100001665","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001665","name":"Agence Nationale de la Recherche","doi-asserted-by":"publisher","award":["ANR-21-CE44-0035-01"],"award-info":[{"award-number":["ANR-21-CE44-0035-01"]}],"id":[{"id":"10.13039\/501100001665","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J. Proteome Res."],"published-print":{"date-parts":[[2025,5,2]]},"DOI":"10.1021\/acs.jproteome.4c01056","type":"journal-article","created":{"date-parts":[[2025,3,31]],"date-time":"2025-03-31T14:46:02Z","timestamp":1743432362000},"page":"2408-2418","source":"Crossref","is-referenced-by-count":5,"title":["Mind Your Spectra: Points to be Aware of When Validating the Identification of Isobaric Histone Peptidoforms"],"prefix":"10.1021","volume":"24","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6408-1768","authenticated-orcid":true,"given":"Hassan","family":"Hijazi","sequence":"first","affiliation":[{"name":"University Grenoble Alpes, CEA, INSERM, UA13 BGE, CNRS, CEA","place":["Grenoble, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Julie","family":"Manessier","sequence":"additional","affiliation":[{"name":"University Grenoble Alpes, CEA, INSERM, UA13 BGE, CNRS, CEA","place":["Grenoble, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sabine","family":"Brugiere","sequence":"additional","affiliation":[{"name":"University Grenoble Alpes, CEA, INSERM, UA13 BGE, CNRS, CEA","place":["Grenoble, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tina","family":"Ravnsborg","sequence":"additional","affiliation":[{"name":"VILLUM Center for Bioanalytical Sciences and Department of Biochemistry and Molecular Biology","place":["Odense, Denmark"]},{"name":"University of Southern Denmark","place":["Odense, Denmark"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marie","family":"Cour\u00e7on","sequence":"additional","affiliation":[{"name":"University Grenoble Alpes, CEA, INSERM, UA13 BGE, CNRS, CEA","place":["Grenoble, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0009-0007-8241-6059","authenticated-orcid":true,"given":"Baptiste","family":"Brule","sequence":"additional","affiliation":[{"name":"Laboratoire de Neurosciences Cognitives et Adaptatives (LNCA)","place":["Strasbourg, France"]},{"name":"University of Strasbourg","place":["Strasbourg, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Karine","family":"Merienne","sequence":"additional","affiliation":[{"name":"Laboratoire de Neurosciences Cognitives et Adaptatives (LNCA)","place":["Strasbourg, France"]},{"name":"Centre National de la Recherche Scientifique (CNRS, UMR 7364)","place":["Strasbourg, France"]},{"name":"University of Strasbourg","place":["Strasbourg, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1862-8528","authenticated-orcid":true,"given":"Ole N.","family":"Jensen","sequence":"additional","affiliation":[{"name":"VILLUM Center for Bioanalytical Sciences and Department of Biochemistry and Molecular Biology","place":["Odense, Denmark"]},{"name":"University of Southern Denmark","place":["Odense, Denmark"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Anne-Marie","family":"Hesse","sequence":"additional","affiliation":[{"name":"University Grenoble Alpes, CEA, INSERM, UA13 BGE, CNRS, CEA","place":["Grenoble, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christophe","family":"Bruley","sequence":"additional","affiliation":[{"name":"University Grenoble Alpes, CEA, INSERM, UA13 BGE, CNRS, CEA","place":["Grenoble, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2122-3900","authenticated-orcid":true,"given":"Delphine","family":"Pflieger","sequence":"additional","affiliation":[{"name":"University Grenoble Alpes, CEA, INSERM, UA13 BGE, CNRS, CEA","place":["Grenoble, France"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"316","published-online":{"date-parts":[[2025,3,31]]},"reference":[{"key":"ref1\/cit1","doi-asserted-by":"publisher","DOI":"10.1021\/cr500491u"},{"key":"ref2\/cit2","doi-asserted-by":"publisher","DOI":"10.15252\/embr.202152774"},{"key":"ref3\/cit3","doi-asserted-by":"publisher","DOI":"10.1038\/nprot.2007.106"},{"key":"ref4\/cit4","doi-asserted-by":"publisher","DOI":"10.1074\/mcp.O114.046573"},{"key":"ref5\/cit5","doi-asserted-by":"publisher","DOI":"10.1002\/pmic.201600045"},{"key":"ref6\/cit6","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4939-6630-1_8"},{"key":"ref7\/cit7","doi-asserted-by":"publisher","DOI":"10.1002\/pmic.201400569"},{"key":"ref8\/cit8","doi-asserted-by":"publisher","DOI":"10.1021\/jasms.3c00223"},{"key":"ref9\/cit9","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jproteome.6b00724"},{"key":"ref10\/cit10","doi-asserted-by":"publisher","DOI":"10.1039\/D1MO00201E"},{"key":"ref11\/cit11","doi-asserted-by":"publisher","DOI":"10.1074\/mcp.M114.046011"},{"key":"ref12\/cit12","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jproteome.8b00133"},{"key":"ref13\/cit13","doi-asserted-by":"publisher","DOI":"10.1016\/j.ymeth.2019.12.001"},{"key":"ref14\/cit14","doi-asserted-by":"publisher","DOI":"10.1186\/s13072-015-0027-3"},{"key":"ref15\/cit15","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-018-03845-1"},{"key":"ref16\/cit16","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkab1137"},{"key":"ref17\/cit17","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-0716-4228-3_2"},{"key":"ref18\/cit18","doi-asserted-by":"publisher","DOI":"10.1186\/s13072-016-0109-x"},{"key":"ref19\/cit19","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jproteome.8b00717"},{"key":"ref20\/cit20","doi-asserted-by":"publisher","DOI":"10.1021\/acs.analchem.9b04884"},{"key":"ref21\/cit21","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btaa118"},{"key":"ref22\/cit22","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq054"},{"key":"ref23\/cit23","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-021-01184-6"},{"key":"ref24\/cit24","doi-asserted-by":"publisher","DOI":"10.1021\/acs.analchem.4c02803"},{"key":"ref25\/cit25","doi-asserted-by":"publisher","DOI":"10.1016\/j.mcpro.2024.100799"},{"key":"ref26\/cit26","doi-asserted-by":"publisher","DOI":"10.1021\/pr3007045"},{"key":"ref27\/cit27","doi-asserted-by":"publisher","DOI":"10.1074\/mcp.TIR118.000783"},{"key":"ref28\/cit28","doi-asserted-by":"publisher","DOI":"10.1038\/s41592-022-01523-1"},{"key":"ref29\/cit29","doi-asserted-by":"publisher","DOI":"10.3390\/proteomes9020018"},{"key":"ref30\/cit30","doi-asserted-by":"publisher","DOI":"10.1002\/oms.1210260513"},{"key":"ref31\/cit31","doi-asserted-by":"publisher","DOI":"10.1021\/pr700644t"},{"key":"ref32\/cit32","doi-asserted-by":"publisher","DOI":"10.1002\/pmic.202000111"},{"key":"ref33\/cit33","doi-asserted-by":"publisher","DOI":"10.1021\/pr5008015"},{"key":"ref34\/cit34","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jproteome.9b00141"},{"key":"ref35\/cit35","doi-asserted-by":"publisher","DOI":"10.1021\/pr101065j"},{"key":"ref36\/cit36","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.4256"},{"key":"ref37\/cit37","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkx696"},{"key":"ref38\/cit38","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkab1038"},{"key":"ref39\/cit39","doi-asserted-by":"publisher","DOI":"10.1074\/mcp.RA117.000543"},{"key":"ref40\/cit40","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-023-42543-5"}],"container-title":["Journal of Proteome Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/pubs.acs.org\/doi\/pdf\/10.1021\/acs.jproteome.4c01056","content-type":"application\/pdf","content-version":"vor","intended-application":"unspecified"},{"URL":"https:\/\/pubs.acs.org\/doi\/pdf\/10.1021\/acs.jproteome.4c01056","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,5,2]],"date-time":"2025-05-02T07:34:43Z","timestamp":1746171283000},"score":1,"resource":{"primary":{"URL":"https:\/\/pubs.acs.org\/doi\/10.1021\/acs.jproteome.4c01056"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,3,31]]},"references-count":40,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2025,5,2]]}},"alternative-id":["10.1021\/acs.jproteome.4c01056"],"URL":"https:\/\/doi.org\/10.1021\/acs.jproteome.4c01056","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2024.11.13.623238","asserted-by":"object"}]},"ISSN":["1535-3893","1535-3907"],"issn-type":[{"value":"1535-3893","type":"print"},{"value":"1535-3907","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,3,31]]}}}