{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,1]],"date-time":"2026-06-01T20:49:26Z","timestamp":1780346966695,"version":"3.54.1"},"reference-count":49,"publisher":"Springer Science and Business Media LLC","issue":"7815","license":[{"start":{"date-parts":[[2020,7,1]],"date-time":"2020-07-01T00:00:00Z","timestamp":1593561600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/www.springer.com\/tdm"},{"start":{"date-parts":[[2020,7,1]],"date-time":"2020-07-01T00:00:00Z","timestamp":1593561600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Nature"],"published-print":{"date-parts":[[2020,7,9]]},"DOI":"10.1038\/s41586-020-2460-0","type":"journal-article","created":{"date-parts":[[2020,7,1]],"date-time":"2020-07-01T16:39:57Z","timestamp":1593621597000},"page":"271-276","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":177,"title":["Extensive signal integration by the phytohormone protein network"],"prefix":"10.1038","volume":"583","author":[{"given":"Melina","family":"Altmann","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Stefan","family":"Altmann","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Patricia A.","family":"Rodriguez","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Benjamin","family":"Weller","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lena","family":"Elorduy Vergara","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Julius","family":"Palme","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Nora","family":"Mar\u00edn-de la Rosa","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mayra","family":"Sauer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marion","family":"Wenig","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jos\u00e9 Antonio","family":"Villa\u00e9cija-Aguilar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jennifer","family":"Sales","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2509-0562","authenticated-orcid":false,"given":"Chung-Wen","family":"Lin","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ramakrishnan","family":"Pandiarajan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Veronika","family":"Young","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alexandra","family":"Strobel","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lisa","family":"Gross","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Samy","family":"Carbonnel","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Karl G.","family":"Kugler","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7790-9736","authenticated-orcid":false,"given":"Antoni","family":"Garcia-Molina","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"George W.","family":"Bassel","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Claudia","family":"Falter","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6484-1077","authenticated-orcid":false,"given":"Klaus F. X.","family":"Mayer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6163-745X","authenticated-orcid":false,"given":"Caroline","family":"Gutjahr","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8146-6018","authenticated-orcid":false,"given":"A. Corina","family":"Vlot","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4036-766X","authenticated-orcid":false,"given":"Erwin","family":"Grill","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2012-6746","authenticated-orcid":false,"given":"Pascal","family":"Falter-Braun","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2020,7,1]]},"reference":[{"key":"2460_CR1","doi-asserted-by":"publisher","first-page":"178","DOI":"10.1016\/j.tplants.2011.02.004","volume":"16","author":"G Krouk","year":"2011","unstructured":"Krouk, G. et al. A framework integrating plant growth with hormones and nutrients. Trends Plant Sci. 16, 178\u2013182 (2011).","journal-title":"Trends Plant Sci."},{"key":"2460_CR2","doi-asserted-by":"publisher","first-page":"290","DOI":"10.1016\/j.pbi.2011.02.001","volume":"14","author":"Z Peleg","year":"2011","unstructured":"Peleg, Z. & Blumwald, E. Hormone balance and abiotic stress tolerance in crop plants. Curr. Opin. Plant Biol. 14, 290\u2013295 (2011).","journal-title":"Curr. Opin. Plant Biol."},{"key":"2460_CR3","doi-asserted-by":"publisher","first-page":"360","DOI":"10.1016\/j.devcel.2014.04.004","volume":"29","author":"S Lumba","year":"2014","unstructured":"Lumba, S. et al. A mesoscale abscisic acid hormone interactome reveals a dynamic signaling landscape in Arabidopsis. Dev. Cell 29, 360\u2013372 (2014).","journal-title":"Dev. Cell"},{"key":"2460_CR4","doi-asserted-by":"publisher","first-page":"467","DOI":"10.1016\/j.cell.2006.05.050","volume":"126","author":"JL Nemhauser","year":"2006","unstructured":"Nemhauser, J. L., Hong, F. & Chory, J. Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. Cell 126, 467\u2013475 (2006).","journal-title":"Cell"},{"key":"2460_CR5","doi-asserted-by":"publisher","first-page":"D358","DOI":"10.1093\/nar\/gkt1115","volume":"42","author":"S Orchard","year":"2014","unstructured":"Orchard, S. et al. The MIntAct project\u2014IntAct as a common curation platform for 11 molecular interaction databases. Nucleic Acids Res. 42, D358\u2013D363 (2014).","journal-title":"Nucleic Acids Res."},{"key":"2460_CR6","doi-asserted-by":"publisher","first-page":"104","DOI":"10.1126\/science.1158684","volume":"322","author":"H Yu","year":"2008","unstructured":"Yu, H. et al. High-quality binary protein interaction map of the yeast interactome network. Science 322, 104\u2013110 (2008).","journal-title":"Science"},{"key":"2460_CR7","doi-asserted-by":"publisher","first-page":"e20067","DOI":"10.1002\/cppb.20067","volume":"3","author":"M Altmann","year":"2018","unstructured":"Altmann, M., Altmann, S., Falter, C. & Falter-Braun, P. High-quality yeast-2-hybrid interaction network mapping. Curr. Protoc. Plant Biol. 3, e20067 (2018).","journal-title":"Curr. Protoc. Plant Biol."},{"key":"2460_CR8","doi-asserted-by":"publisher","first-page":"364","DOI":"10.1016\/j.chom.2014.08.004","volume":"16","author":"R We\u00dfling","year":"2014","unstructured":"We\u00dfling, R. et al. Convergent targeting of a common host protein-network by pathogen effectors from three kingdoms of life. Cell Host Microbe 16, 364\u2013375 (2014).","journal-title":"Cell Host Microbe"},{"key":"2460_CR9","doi-asserted-by":"publisher","first-page":"622","DOI":"10.1016\/j.celrep.2014.06.033","volume":"8","author":"JL Pruneda-Paz","year":"2014","unstructured":"Pruneda-Paz, J. L. et al. A genome-scale resource for the functional characterization of Arabidopsis transcription factors. Cell Rep. 8, 622\u2013632 (2014).","journal-title":"Cell Rep."},{"key":"2460_CR10","doi-asserted-by":"publisher","first-page":"601","DOI":"10.1126\/science.1203877","volume":"333","author":"Arabidopsis Interactome Mapping Consortium","year":"2011","unstructured":"Arabidopsis Interactome Mapping Consortium. Evidence for network evolution in an Arabidopsis interactome map. Science 333, 601\u2013607 (2011).","journal-title":"Science"},{"key":"2460_CR11","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1038\/nmeth.1281","volume":"6","author":"P Braun","year":"2009","unstructured":"Braun, P. et al. An experimentally derived confidence score for binary protein-protein interactions. Nat. Methods 6, 91\u201397 (2009).","journal-title":"Nat. Methods"},{"key":"2460_CR12","doi-asserted-by":"publisher","first-page":"1499","DOI":"10.1002\/pmic.201100598","volume":"12","author":"P Braun","year":"2012","unstructured":"Braun, P. Interactome mapping for analysis of complex phenotypes: insights from benchmarking binary interaction assays. Proteomics 12, 1499\u20131518 (2012).","journal-title":"Proteomics"},{"issue":"D1","key":"2460_CR13","doi-asserted-by":"publisher","first-page":"D529","DOI":"10.1093\/nar\/gky1079","volume":"47","author":"R Oughtred","year":"2019","unstructured":"Oughtred, R. et al. The BioGRID interaction database: 2019 update. Nucleic Acids Res. 47 (D1), D529\u2013D541 (2019).","journal-title":"Nucleic Acids Res."},{"key":"2460_CR14","doi-asserted-by":"publisher","first-page":"56","DOI":"10.1038\/nrg2918","volume":"12","author":"A-L Barab\u00e1si","year":"2011","unstructured":"Barab\u00e1si, A.-L., Gulbahce, N. & Loscalzo, J. Network medicine: a network-based approach to human disease. Nat. Rev. Genet. 12, 56\u201368 (2011).","journal-title":"Nat. Rev. Genet."},{"key":"2460_CR15","doi-asserted-by":"publisher","first-page":"7821","DOI":"10.1073\/pnas.122653799","volume":"99","author":"M Girvan","year":"2002","unstructured":"Girvan, M. & Newman, M. E. Community structure in social and biological networks. Proc. Natl Acad. Sci. USA 99, 7821\u20137826 (2002).","journal-title":"Proc. Natl Acad. Sci. USA"},{"key":"2460_CR16","doi-asserted-by":"publisher","first-page":"651","DOI":"10.1146\/annurev-arplant-042809-112122","volume":"61","author":"SR Cutler","year":"2010","unstructured":"Cutler, S. R., Rodriguez, P. L., Finkelstein, R. R. & Abrams, S. R. Abscisic acid: emergence of a core signaling network. Annu. Rev. Plant Biol. 61, 651\u2013679 (2010).","journal-title":"Annu. Rev. Plant Biol."},{"key":"2460_CR17","doi-asserted-by":"publisher","first-page":"47","DOI":"10.1104\/pp.108.1.47","volume":"108","author":"J Deikman","year":"1995","unstructured":"Deikman, J. & Hammer, P. E. Induction of anthocyanin accumulation by cytokinins in Arabidopsis thaliana. Plant Physiol. 108, 47\u201357 (1995).","journal-title":"Plant Physiol."},{"key":"2460_CR18","first-page":"513","volume":"2","author":"P Guzm\u00e1n","year":"1990","unstructured":"Guzm\u00e1n, P. & Ecker, J. R. Exploiting the triple response of Arabidopsis to identify ethylene-related mutants. Plant Cell 2, 513\u2013523 (1990).","journal-title":"Plant Cell"},{"key":"2460_CR19","doi-asserted-by":"publisher","first-page":"177","DOI":"10.1146\/annurev.phyto.050908.135202","volume":"47","author":"AC Vlot","year":"2009","unstructured":"Vlot, A. C., Dempsey, D. A. & Klessig, D. F. Salicylic acid, a multifaceted hormone to combat disease. Annu. Rev. Phytopathol. 47, 177\u2013206 (2009).","journal-title":"Annu. Rev. Phytopathol."},{"key":"2460_CR20","first-page":"445","volume":"26","author":"S Lumba","year":"2010","unstructured":"Lumba, S., Cutler, S. & McCourt, P. Plant nuclear hormone receptors: a role for small molecules in protein\u2013protein interactions. Annu. Rev. Plant Biol. 26, 445\u2013469 (2010).","journal-title":"Annu. Rev. Plant Biol."},{"key":"2460_CR21","doi-asserted-by":"publisher","first-page":"10280","DOI":"10.1073\/pnas.1706593114","volume":"114","author":"SV Tischer","year":"2017","unstructured":"Tischer, S. V. et al. Combinatorial interaction network of abscisic acid receptors and coreceptors from Arabidopsis thaliana. Proc. Natl Acad. Sci. USA 114, 10280\u201310285 (2017).","journal-title":"Proc. Natl Acad. Sci. USA"},{"key":"2460_CR22","doi-asserted-by":"publisher","DOI":"10.1038\/srep28941","volume":"6","author":"F Aleman","year":"2016","unstructured":"Aleman, F. et al. An ABA-increased interaction of the PYL6 ABA receptor with MYC2 transcription factor: a putative link of ABA and JA signaling. Sci. Rep. 6, 28941 (2016).","journal-title":"Sci. Rep."},{"key":"2460_CR23","doi-asserted-by":"publisher","first-page":"ra53","DOI":"10.1126\/scisignal.2005051","volume":"7","author":"Y Zhao","year":"2014","unstructured":"Zhao, Y. et al. The ABA receptor PYL8 promotes lateral root growth by enhancing MYB77-dependent transcription of auxin-responsive genes. Sci. Signal. 7, ra53 (2014).","journal-title":"Sci. Signal."},{"key":"2460_CR24","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-017-00113-6","volume":"8","author":"G N\u00e9e","year":"2017","unstructured":"N\u00e9e, G. et al. DELAY OF GERMINATION1 requires PP2C phosphatases of the ABA signalling pathway to control seed dormancy. Nat. Commun. 8, 72 (2017).","journal-title":"Nat. Commun."},{"key":"2460_CR25","doi-asserted-by":"publisher","first-page":"235","DOI":"10.3389\/fpls.2015.00235","volume":"6","author":"X Kuai","year":"2015","unstructured":"Kuai, X., MacLeod, B. J. & Despr\u00e9s, C. Integrating data on the Arabidopsis NPR1\/NPR3\/NPR4 salicylic acid receptors; a differentiating argument. Front. Plant Sci. 6, 235 (2015).","journal-title":"Front. Plant Sci."},{"key":"2460_CR26","doi-asserted-by":"publisher","first-page":"1454","DOI":"10.1016\/j.cell.2018.03.044","volume":"173","author":"Y Ding","year":"2018","unstructured":"Ding, Y. et al. Opposite roles of salicylic acid receptors NPR1 and NPR3\/NPR4 in transcriptional regulation of plant immunity. Cell 173, 1454\u20131467 (2018).","journal-title":"Cell"},{"key":"2460_CR27","doi-asserted-by":"publisher","first-page":"88","DOI":"10.3389\/fpls.2013.00088","volume":"4","author":"M Hermann","year":"2013","unstructured":"Hermann, M. et al. The Arabidopsis NIMIN proteins affect NPR1 differentially. Front Plant Sci 4, 88 (2013).","journal-title":"Front Plant Sci"},{"key":"2460_CR28","doi-asserted-by":"publisher","first-page":"291","DOI":"10.1146\/annurev-arplant-042916-040925","volume":"68","author":"MT Waters","year":"2017","unstructured":"Waters, M. T., Gutjahr, C., Bennett, T. & Nelson, D. C. Strigolactone signaling and evolution. Annu. Rev. Plant Biol. 68, 291\u2013322 (2017).","journal-title":"Annu. Rev. Plant Biol."},{"key":"2460_CR29","doi-asserted-by":"publisher","first-page":"1221","DOI":"10.1104\/pp.114.240036","volume":"165","author":"A Scaffidi","year":"2014","unstructured":"Scaffidi, A. et al. Strigolactone hormones and their stereoisomers signal through two related receptor proteins to induce different physiological responses in Arabidopsis. Plant Physiol. 165, 1221\u20131232 (2014).","journal-title":"Plant Physiol."},{"key":"2460_CR30","doi-asserted-by":"publisher","first-page":"e1008327","DOI":"10.1371\/journal.pgen.1008327","volume":"15","author":"JA Villa\u00e9cija-Aguilar","year":"2019","unstructured":"Villa\u00e9cija-Aguilar, J. A. et al. SMAX1\/SMXL2 regulate root and root hair development downstream of KAI2-mediated signalling in Arabidopsis. PLoS Genet. 15, e1008327 (2019).","journal-title":"PLoS Genet."},{"key":"2460_CR31","doi-asserted-by":"publisher","first-page":"D1123","DOI":"10.1093\/nar\/gkq1066","volume":"39","author":"Z Jiang","year":"2011","unstructured":"Jiang, Z. et al. AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies. Nucleic Acids Res. 39, D1123\u2013D1129 (2011).","journal-title":"Nucleic Acids Res."},{"key":"2460_CR32","doi-asserted-by":"publisher","first-page":"D535","DOI":"10.1093\/nar\/gkj109","volume":"34","author":"C Stark","year":"2006","unstructured":"Stark, C. et al. BioGRID: a general repository for interaction datasets. Nucleic Acids Res. 34, D535\u2013D539 (2006).","journal-title":"Nucleic Acids Res."},{"key":"2460_CR33","doi-asserted-by":"publisher","first-page":"83","DOI":"10.1038\/nmeth.1280","volume":"6","author":"K Venkatesan","year":"2009","unstructured":"Venkatesan, K. et al. An empirical framework for binary interactome mapping. Nat. Methods 6, 83\u201390 (2009).","journal-title":"Nat. Methods"},{"key":"2460_CR34","doi-asserted-by":"publisher","first-page":"101","DOI":"10.1038\/nrg1272","volume":"5","author":"AL Barab\u00e1si","year":"2004","unstructured":"Barab\u00e1si, A. L. & Oltvai, Z. N. Network biology: understanding the cell\u2019s functional organization. Nat. Rev. Genet. 5, 101\u2013113 (2004).","journal-title":"Nat. Rev. Genet."},{"key":"2460_CR35","doi-asserted-by":"publisher","first-page":"2498","DOI":"10.1101\/gr.1239303","volume":"13","author":"P Shannon","year":"2003","unstructured":"Shannon, P. et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res. 13, 2498\u20132504 (2003).","journal-title":"Genome Res."},{"key":"2460_CR36","doi-asserted-by":"publisher","first-page":"789","DOI":"10.1111\/tpj.13415","volume":"89","author":"CY Cheng","year":"2017","unstructured":"Cheng, C. Y. et al. Araport11: a complete reannotation of the Arabidopsis thaliana reference genome. Plant J. 89, 789\u2013804 (2017).","journal-title":"Plant J."},{"key":"2460_CR37","first-page":"1","volume":"1695","author":"G Cs\u00e1rdi","year":"2006","unstructured":"Cs\u00e1rdi, G. & Nepusz, T. The igraph software package for complex network research. InterJ. Complex Syst. 1695, 1\u20139 (2006).","journal-title":"InterJ. Complex Syst."},{"key":"2460_CR38","doi-asserted-by":"publisher","first-page":"257","DOI":"10.1093\/bioinformatics\/btl567","volume":"23","author":"S Falcon","year":"2007","unstructured":"Falcon, S. & Gentleman, R. Using GOstats to test gene lists for GO term association. Bioinformatics 23, 257\u2013258 (2007).","journal-title":"Bioinformatics"},{"issue":"D1","key":"2460_CR39","doi-asserted-by":"publisher","first-page":"D369","DOI":"10.1093\/nar\/gkw1102","volume":"45","author":"A Chatr-aryamontri","year":"2017","unstructured":"Chatr-aryamontri, A. et al. The BioGRID interaction database: 2017 update. Nucleic Acids Res. 45 (D1), D369\u2013D379 (2017).","journal-title":"Nucleic Acids Res."},{"key":"2460_CR40","doi-asserted-by":"publisher","first-page":"1349","DOI":"10.1093\/nar\/19.6.1349","volume":"19","author":"K Edwards","year":"1991","unstructured":"Edwards, K., Johnstone, C. & Thompson, C. A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Res. 19, 1349 (1991).","journal-title":"Nucleic Acids Res."},{"key":"2460_CR41","doi-asserted-by":"publisher","first-page":"676","DOI":"10.1038\/nmeth.2019","volume":"9","author":"J Schindelin","year":"2012","unstructured":"Schindelin, J. et al. Fiji: an open-source platform for biological-image analysis. Nat. Methods 9, 676\u2013682 (2012).","journal-title":"Nat. Methods"},{"key":"2460_CR42","doi-asserted-by":"publisher","first-page":"2453","DOI":"10.1093\/bioinformatics\/btr390","volume":"27","author":"MH Longair","year":"2011","unstructured":"Longair, M. H., Baker, D. A. & Armstrong, J. D. Simple Neurite Tracer: open source software for reconstruction, visualization and analysis of neuronal processes. Bioinformatics 27, 2453\u20132454 (2011).","journal-title":"Bioinformatics"},{"key":"2460_CR43","first-page":"e1098","volume":"4","author":"M Nakata","year":"2014","unstructured":"Nakata, M. & Ohme-Takagi, M. Quantification of anthocyanin content. Bio Protoc. 4, e1098 (2014).","journal-title":"Bio Protoc."},{"key":"2460_CR44","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-019-11798-2","volume":"10","author":"M Wenig","year":"2019","unstructured":"Wenig, M. et al. Systemic acquired resistance networks amplify airborne defense cues. Nat. Commun. 10, 3813 (2019).","journal-title":"Nat. Commun."},{"key":"2460_CR45","doi-asserted-by":"publisher","first-page":"e46907","DOI":"10.1371\/journal.pone.0046907","volume":"7","author":"B Belda-Palaz\u00f3n","year":"2012","unstructured":"Belda-Palaz\u00f3n, B. et al. Aminopropyltransferases involved in polyamine biosynthesis localize preferentially in the nucleus of plant cells. PLoS ONE\u00a07, e46907 (2012).","journal-title":"PLoS ONE"},{"key":"2460_CR46","doi-asserted-by":"publisher","first-page":"542","DOI":"10.1111\/j.1365-313X.2011.04607.x","volume":"67","author":"C Gehl","year":"2011","unstructured":"Gehl, C. et al. Quantitative analysis of dynamic protein-protein interactions in planta by a floated-leaf luciferase complementation imaging (FLuCI) assay using binary Gateway vectors. Plant J. 67, 542\u2013553 (2011).","journal-title":"Plant J."},{"key":"2460_CR47","doi-asserted-by":"publisher","first-page":"1058","DOI":"10.1111\/tpj.13312","volume":"88","author":"AV Klepikova","year":"2016","unstructured":"Klepikova, A. V., Kasianov, A. S., Gerasimov, E. S., Logacheva, M. D. & Penin, A. A. A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA-seq profiling. Plant J. 88, 1058\u20131070 (2016).","journal-title":"Plant J."},{"key":"2460_CR48","doi-asserted-by":"publisher","first-page":"2114","DOI":"10.1093\/bioinformatics\/btu170","volume":"30","author":"AM Bolger","year":"2014","unstructured":"Bolger, A. M., Lohse, M. & Usadel, B. Trimmomatic: a flexible trimmer for Illumina sequence data. Bioinformatics 30, 2114\u20132120 (2014).","journal-title":"Bioinformatics"},{"key":"2460_CR49","doi-asserted-by":"publisher","first-page":"525","DOI":"10.1038\/nbt.3519","volume":"34","author":"NL Bray","year":"2016","unstructured":"Bray, N. L., Pimentel, H., Melsted, P. & Pachter, L. Near-optimal probabilistic RNA-seq quantification. Nat. Biotechnol. 34, 525\u2013527 (2016); erratum 34, 888 (2016).","journal-title":"Nat. Biotechnol."}],"updated-by":[{"DOI":"10.1038\/s41586-020-2585-1","type":"correction","label":"Correction","source":"publisher","updated":{"date-parts":[[2020,7,29]],"date-time":"2020-07-29T00:00:00Z","timestamp":1595980800000}}],"container-title":["Nature"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.nature.com\/articles\/s41586-020-2460-0.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/www.nature.com\/articles\/s41586-020-2460-0","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/www.nature.com\/articles\/s41586-020-2460-0.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,4,17]],"date-time":"2022-04-17T21:11:02Z","timestamp":1650229862000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.nature.com\/articles\/s41586-020-2460-0"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,7,1]]},"references-count":49,"journal-issue":{"issue":"7815","published-print":{"date-parts":[[2020,7,9]]}},"alternative-id":["2460"],"URL":"https:\/\/doi.org\/10.1038\/s41586-020-2460-0","relation":{"correction":[{"id-type":"doi","id":"10.1038\/s41586-020-2585-1","asserted-by":"object"}]},"ISSN":["0028-0836","1476-4687"],"issn-type":[{"value":"0028-0836","type":"print"},{"value":"1476-4687","type":"electronic"}],"subject":[],"published":{"date-parts":[[2020,7,1]]},"assertion":[{"value":"6 June 2019","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"14 April 2020","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"1 July 2020","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"29 July 2020","order":4,"name":"change_date","label":"Change Date","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"Correction","order":5,"name":"change_type","label":"Change Type","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"A Correction to this paper has been published:","order":6,"name":"change_details","label":"Change Details","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"https:\/\/doi.org\/10.1038\/s41586-020-2585-1","URL":"https:\/\/doi.org\/10.1038\/s41586-020-2585-1","order":7,"name":"change_details","label":"Change Details","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"The authors declare no competing interests.","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}}]}}