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Here we develop a deep neural network approach to represent the DFT Hamiltonian (DeepH) of crystalline materials, aiming to bypass the computationally demanding self-consistent field iterations of DFT and substantially improve the efficiency of ab initio electronic-structure calculations. A general framework is proposed to deal with the large dimensionality and gauge (or rotation) covariance of the DFT Hamiltonian matrix by virtue of locality, and this is realized by a message-passing neural network for deep learning. High accuracy, high efficiency and good transferability of the DeepH method are generally demonstrated for various kinds of material system and physical property. The method provides a solution to the accuracy\u2013efficiency dilemma of DFT and opens opportunities to explore large-scale material systems, as evidenced by a promising application in the study of twisted van der Waals materials.<\/jats:p>","DOI":"10.1038\/s43588-022-00265-6","type":"journal-article","created":{"date-parts":[[2022,6,23]],"date-time":"2022-06-23T16:35:56Z","timestamp":1656002156000},"page":"367-377","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":197,"title":["Deep-learning density functional theory Hamiltonian for efficient ab initio electronic-structure calculation"],"prefix":"10.1038","volume":"2","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-5967-5251","authenticated-orcid":false,"given":"He","family":"Li","sequence":"first","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8763-8327","authenticated-orcid":false,"given":"Zun","family":"Wang","sequence":"additional","affiliation":[]},{"given":"Nianlong","family":"Zou","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2814-6071","authenticated-orcid":false,"given":"Meng","family":"Ye","sequence":"additional","affiliation":[]},{"given":"Runzhang","family":"Xu","sequence":"additional","affiliation":[]},{"given":"Xiaoxun","family":"Gong","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0001-9685-2547","authenticated-orcid":false,"given":"Wenhui","family":"Duan","sequence":"additional","affiliation":[]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4844-2460","authenticated-orcid":false,"given":"Yong","family":"Xu","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2022,6,23]]},"reference":[{"key":"265_CR1","doi-asserted-by":"publisher","first-page":"B864","DOI":"10.1103\/PhysRev.136.B864","volume":"136","author":"P Hohenberg","year":"1964","unstructured":"Hohenberg, P. & Kohn, W. 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