{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,13]],"date-time":"2026-10-13T14:11:52Z","timestamp":1791900712704,"version":"4.3.4"},"reference-count":79,"publisher":"Springer Science and Business Media LLC","issue":"5","license":[{"start":{"date-parts":[[2016,7,20]],"date-time":"2016-07-20T00:00:00Z","timestamp":1468972800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/www.springer.com\/tdm"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Heredity"],"published-print":{"date-parts":[[2016,11]]},"DOI":"10.1038\/hdy.2016.51","type":"journal-article","created":{"date-parts":[[2016,7,20]],"date-time":"2016-07-20T09:25:40Z","timestamp":1469006740000},"page":"307-315","update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":41,"title":["Secondary contact and asymmetrical gene flow in a cosmopolitan marine fish across the Benguela upwelling zone"],"prefix":"10.1038","volume":"117","author":[{"given":"K","family":"Reid","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"T B","family":"Hoareau","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"J E","family":"Graves","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"W M","family":"Potts","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"S M R","family":"dos Santos","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"A W","family":"Klopper","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"P","family":"Bloomer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2016,7,20]]},"reference":[{"key":"BFhdy201651_CR1","doi-asserted-by":"crossref","first-page":"323","DOI":"10.1186\/1471-2105-9-323","volume":"9","author":"T Antao","year":"2008","unstructured":"Antao T, Lopes A, Lopes RJ, Beja-Pereira A, Luikart G . (2008). LOSITAN: a workbench to detect molecular adaptation based on a Fst-outlier method. BMC Bioinformatics 9: 323.","journal-title":"BMC Bioinformatics"},{"key":"BFhdy201651_CR2","doi-asserted-by":"crossref","first-page":"341","DOI":"10.1038\/hdy.1979.87","volume":"43","author":"NH Barton","year":"1979","unstructured":"Barton NH . (1979). The dynamics of hybrid zone. Heredity 43: 341\u2013359.","journal-title":"Heredity"},{"key":"BFhdy201651_CR3","unstructured":"Bealey RSJ (2014). Short term changes to the life history of shad, Pomatomus saltatrix (Perciformes: Pomatomidae), in southern Angola. MSc thesis, Rhodes University."},{"key":"BFhdy201651_CR4","doi-asserted-by":"crossref","first-page":"2044","DOI":"10.1111\/j.1365-294X.2011.05080.x","volume":"20","author":"N Bierne","year":"2011","unstructured":"Bierne N, Welch J, Loire E, Bonhomme F, David P . (2011). The coupling hypothesis: why genome scans may fail to map local adaptation genes. Mol Ecol 20: 2044\u20132072.","journal-title":"Mol Ecol"},{"key":"BFhdy201651_CR5","doi-asserted-by":"crossref","first-page":"72","DOI":"10.1093\/czoolo\/59.1.72","volume":"59","author":"N Bierne","year":"2013","unstructured":"Bierne N, Gagnaire PA, David P . (2013). The geography of introgression in a patchy environment and the thorn in the side of ecological speciation. Curr Zool 59: 72\u201386.","journal-title":"Curr Zool"},{"key":"BFhdy201651_CR6","volume-title":"GENETIX 4.05 Logiciel sous Windows pour la G\u00e9n\u00e9tique des Populations, Laboratoire G\u00e9nome, Populations, Interactions, CNRS UMR 5171","author":"K Belkhir","year":"1996","unstructured":"Belkhir K, Borsa P, Chikhi L, Raufaste N, Bonhomme F . (1996\u20132004) GENETIX 4.05 Logiciel sous Windows pour la G\u00e9n\u00e9tique des Populations, Laboratoire G\u00e9nome, Populations, Interactions, CNRS UMR 5171. Universit\u00e9 de Montpellier II: Montpellier, France."},{"key":"BFhdy201651_CR7","doi-asserted-by":"crossref","first-page":"621","DOI":"10.1093\/molbev\/msl191","volume":"24","author":"MP Chapuis","year":"2007","unstructured":"Chapuis MP, Estoup A . (2007). Microsatellite null alleles and estimation of population differentiation. Mol Biol Evol 24: 621\u2013631.","journal-title":"Mol Biol Evol"},{"key":"BFhdy201651_CR8","doi-asserted-by":"crossref","first-page":"727","DOI":"10.1134\/S0026893312040024","volume":"46","author":"YZ Chen","year":"2012","unstructured":"Chen YZ, Xu TJ, Jin XX, Tang D, Wei T, Sun YY et al. (2012). Universal primers for amplification of the complete mitochondrial control region in marine fish species. Mol Biol 46: 727\u2013730.","journal-title":"Mol Biol"},{"key":"BFhdy201651_CR9","first-page":"861","volume":"52","author":"L Chikhi","year":"1998","unstructured":"Chikhi L, Bonhomme F, Agnese JF . (1998). Low genetic variability in a widely distributed and abundant clupeid species, Sardinella aurita. New empirical results and interpretations. J Fish Biol 52: 861\u2013878.","journal-title":"J Fish Biol"},{"key":"BFhdy201651_CR10","doi-asserted-by":"crossref","first-page":"1657","DOI":"10.1046\/j.1365-294x.2000.01020.x","volume":"9","author":"M Clement","year":"2000","unstructured":"Clement M, Posada D, Crandall KA . (2000). TCS: a computer program to estimate gene genealogies. Mol Ecol 9: 1657\u20131659.","journal-title":"Mol Ecol"},{"key":"BFhdy201651_CR11","doi-asserted-by":"crossref","first-page":"857","DOI":"10.1126\/science.287.5454.857","volume":"287","author":"RK Cowen","year":"2000","unstructured":"Cowen RK, Lwiza KMM, Sponaugle S, Paris CB, Olson DB . (2000). Connectivity of marine populations: open or closed? Science 287: 857\u2013859.","journal-title":"Science"},{"key":"BFhdy201651_CR12","doi-asserted-by":"crossref","first-page":"1065","DOI":"10.1111\/j.1755-0998.2008.02156.x","volume":"8","author":"SMR Dos Santos","year":"2008","unstructured":"Dos Santos SMR, Klopper AW, Oosthuizen CJ, Bloomer P . (2008). Isolation and characterization of polymorphic tetranucleotide microsatellite loci in the pelagic perciform fish Pomatomus saltatrix (Linnaeus, 1766) from South Africa. Mol Ecol Res 8: 1065\u20131067.","journal-title":"Mol Ecol Res"},{"key":"BFhdy201651_CR13","doi-asserted-by":"crossref","first-page":"313","DOI":"10.1007\/s00227-005-1564-2","volume":"147","author":"JD Durand","year":"2005","unstructured":"Durand JD, Collet A, Chow S, Guinand B, Borsa P . (2005a). Nuclear and mitochondrial DNA markers indicate unidirectional gene flow of Indo-Pacific to Atlantic bigeye tuna (Thunnus obesus populations, and their admixture off southern Africa. Mar Biol 147: 313\u2013322.","journal-title":"Mar Biol"},{"key":"BFhdy201651_CR14","doi-asserted-by":"crossref","first-page":"277","DOI":"10.1016\/j.ympev.2005.01.019","volume":"36","author":"JD Durand","year":"2005","unstructured":"Durand JD, Tine M, Panfili J, Thiaw OT, Lae R . (2005b). Impact of glaciations and geographic distance on the genetic structure of a tropical estuarine fish, Ethmalosa fimbriata (Clupeidae, S. Bowdich,1825). Mol Phylogenet Evol 36: 277\u2013287.","journal-title":"Mol Phylogenet Evol"},{"key":"BFhdy201651_CR15","doi-asserted-by":"crossref","first-page":"e77483","DOI":"10.1371\/journal.pone.0077483","volume":"8","author":"JD Durand","year":"2013","unstructured":"Durand JD, Guinand B, Dodson JJ, Lecomte F . (2013). Pelagic life and depth: coastal physical features in West Africa shape the genetic structure of the Bonga Shad, Ethmalosa fimbriata. PloS One 8: e77483.","journal-title":"PloS One"},{"key":"BFhdy201651_CR16","doi-asserted-by":"crossref","first-page":"359","DOI":"10.1007\/s12686-011-9548-7","volume":"4","author":"DA Earl","year":"2012","unstructured":"Earl DA, VonHoldt BM . (2012). STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Con Gen Res 4: 359\u2013361.","journal-title":"Con Gen Res"},{"key":"BFhdy201651_CR17","doi-asserted-by":"crossref","first-page":"2611","DOI":"10.1111\/j.1365-294X.2005.02553.x","volume":"14","author":"G Evanno","year":"2005","unstructured":"Evanno G, Regnaut S, Goudet J . (2005). Detecting the number of clusters of individuals using the software STRUCTURE: as simulation study. Mol Ecol 14: 2611\u20132620.","journal-title":"Mol Ecol"},{"key":"BFhdy201651_CR18","doi-asserted-by":"crossref","first-page":"47","DOI":"10.1177\/117693430500100003","volume":"1","author":"L Excoffier","year":"2005","unstructured":"Excoffier L, Laval G, Schneider S . (2005). Arlequin version 3.11: an integrated software package for population genetics data analysis. Evol Bioinform Online 1: 47\u201350.","journal-title":"Evol Bioinform Online"},{"key":"BFhdy201651_CR19","volume-title":"Essential Fish Habitat Source Document: Bluefish, Pomatomus saltatrix, Life History and Habitat Characteristics","author":"MP Fahay","year":"1999","unstructured":"Fahay MP, Berrien PL, Johnson DL, Morse WW . (1999) Essential Fish Habitat Source Document: Bluefish, Pomatomus saltatrix, Life History and Habitat Characteristics NOAA Technical Memo. NMFS-NE-144, 68 p National Marine Fisheries Service: Woods Hole, MA, USA."},{"key":"BFhdy201651_CR20","doi-asserted-by":"crossref","first-page":"1505","DOI":"10.1029\/2003GL017172","volume":"30","author":"P Florenchie","year":"2003","unstructured":"Florenchie P, Lutjeharms JRE, Reason CJC, Masson S, Rouault M . (2003). The source of Benguela Ni\u00f1os in the South Atlantic Ocean. Geophys Res Lett 30: 1505.","journal-title":"Geophys Res Lett"},{"key":"BFhdy201651_CR21","doi-asserted-by":"crossref","first-page":"267","DOI":"10.3354\/meps07895","volume":"379","author":"P-A Gagnaire","year":"2009","unstructured":"Gagnaire P-A, Minegishi Y, Aoyama J, R'eveillac E, Robinet T, Bosc P et al. (2009). Ocean currents drive secondary contact between Anguilla marmorata populations in the Indian Ocean. Mar Ecol Prog Ser 379: 267\u2013278.","journal-title":"Mar Ecol Prog Ser"},{"key":"BFhdy201651_CR22","doi-asserted-by":"crossref","first-page":"3513","DOI":"10.1111\/j.1558-5646.2011.01404.x","volume":"65","author":"PA Gagnaire","year":"2011","unstructured":"Gagnaire PA, Minegishi Y, Zenboudji S, Valade P, Aoyama J, Berrebi P . (2011). Within-population structure highlighted by differential introgression across semipermeable barriers to gene flow in Anguilla marmorata. Evolution 65: 3513\u20133525.","journal-title":"Evolution"},{"key":"BFhdy201651_CR23","doi-asserted-by":"crossref","first-page":"769","DOI":"10.1111\/eva.12288","volume":"8","author":"PA Gagnaire","year":"2015","unstructured":"Gagnaire PA, Broquet T, Aurelle D, Viard F, Souissi A, Bonhomme F . (2015). Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era. Evol Appl 8: 769\u2013786.","journal-title":"Evol Appl"},{"key":"BFhdy201651_CR24","doi-asserted-by":"crossref","first-page":"189","DOI":"10.1186\/1471-2148-11-189","volume":"11","author":"MR Gaither","year":"2011","unstructured":"Gaither MR, Bowen BW, Bordenave TR, Rocha LA, Newman SJ, Gomez JA et al. (2011). Phylogeography of the reef fish Cephalopholis argus (Epinephelidae) indicates Pleistocene isolation across the indo-pacific barrier with contemporary overlap in the coral triangle. BMC Evol Biol 11: 189.","journal-title":"BMC Evol Biol"},{"key":"BFhdy201651_CR25","doi-asserted-by":"crossref","first-page":"347","DOI":"10.1071\/MF9960347","volume":"47","author":"CO Goodbred","year":"1996","unstructured":"Goodbred CO, Graves JE . (1996). Genetic relationships among geographically isolated populations of bluefish (Pomatomus saltatrix. Mar Fresh Res 47: 347\u2013355.","journal-title":"Mar Fresh Res"},{"key":"BFhdy201651_CR26","doi-asserted-by":"crossref","first-page":"461","DOI":"10.1111\/1755-0998.12070","volume":"13","author":"RO Gotoh","year":"2013","unstructured":"Gotoh RO, Tamate S, Yokoyama J, Tamate HB, Hanzawa N . (2013). Characterization of comparative genome\u2010derived simple sequence repeats for acanthopterygian fishes. Mol Ecol Res 13: 461\u2013472.","journal-title":"Mol Ecol Res"},{"key":"BFhdy201651_CR27","doi-asserted-by":"crossref","first-page":"415","DOI":"10.1093\/jhered\/89.5.415","volume":"89","author":"WS Grant","year":"1998","unstructured":"Grant WS, Bowen BW . (1998). Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation. J Hered 89: 415\u2013426.","journal-title":"J Hered"},{"key":"BFhdy201651_CR28","doi-asserted-by":"crossref","first-page":"181","DOI":"10.1016\/j.pocean.2003.10.001","volume":"59","author":"NJ Hardman-Mountford","year":"2003","unstructured":"Hardman-Mountford NJ, Richardson AJ, Agenbag JJ, Hagen E, Nykjaer L, Shillington FA et al. (2003). Ocean climate of the South East Atlantic observed from satellite data and wind models. Prog Oceanogr 59: 181\u2013221.","journal-title":"Prog Oceanogr"},{"key":"BFhdy201651_CR29","doi-asserted-by":"crossref","first-page":"334","DOI":"10.1046\/j.1471-8286.2002.00236.x","volume":"2","author":"M Hassan","year":"2002","unstructured":"Hassan M, Lemaire C, Fauvelot C, Bonhomme F . (2002). Seventeen new exon\u2010primed intron\u2010crossing polymerase chain reaction amplifiable introns in fish. Mol Ecol Not 2: 334\u2013340.","journal-title":"Mol Ecol Not"},{"key":"BFhdy201651_CR30","doi-asserted-by":"crossref","first-page":"333","DOI":"10.1111\/j.1467-2979.2008.00299.x","volume":"9","author":"L Hauser","year":"2008","unstructured":"Hauser L, Carvalho GR . (2008). Paradigm shifts in marine fisheries genetics: ugly hypotheses slain by beautiful facts. Fish Fish 9: 333\u2013362.","journal-title":"Fish Fish"},{"key":"BFhdy201651_CR31","doi-asserted-by":"crossref","first-page":"12","DOI":"10.1016\/j.ecss.2010.04.013","volume":"89","author":"RD Hedger","year":"2010","unstructured":"Hedger RD, N\u00e6sje TF, Cowley PD, Thorstad EB, Attwood C, \u00d8kland F et al. (2010). Residency and migratory behaviour by adult Pomatomus saltatrix in a South African coastal embayment. Estuar Coast Shelf Sci 89: 12\u201320.","journal-title":"Estuar Coast Shelf Sci"},{"key":"BFhdy201651_CR32","doi-asserted-by":"crossref","first-page":"291","DOI":"10.1146\/annurev.ecolsys.110308.120223","volume":"40","author":"ME Hellberg","year":"2009","unstructured":"Hellberg ME . (2009). Gene flow and Isolation among populations of marine animals. Annu Rev Ecol Evol Syst 40: 291\u2013310.","journal-title":"Annu Rev Ecol Evol Syst"},{"key":"BFhdy201651_CR33","doi-asserted-by":"crossref","first-page":"3104","DOI":"10.1111\/j.1365-294X.2007.03367.x","volume":"16","author":"J Hemmer-Hansen","year":"2007","unstructured":"Hemmer-Hansen J, Nielsen EE, Gr\u00f8nkj\u00e6r P, Loeschecke V . (2007). Evolutionary mechanisms shaping the genetic population structure of marine fishes; lessons from the European flounder (Platichthys flesus L.). Mol Ecol 16: 3104\u20133118.","journal-title":"Mol Ecol"},{"key":"BFhdy201651_CR34","doi-asserted-by":"crossref","first-page":"585","DOI":"10.2989\/1814232X.2012.749809","volume":"34","author":"R Henriques","year":"2012","unstructured":"Henriques R, Potts WM, Sauer WHH, Shaw PW . (2012). Evidence of deep genetic divergence between populations of an important recreational fishery species, Lichia amia L. 1758, around southern Africa. Afri J Mar Sci 34: 585\u2013591.","journal-title":"Afri J Mar Sci"},{"key":"BFhdy201651_CR35","doi-asserted-by":"crossref","first-page":"e87907","DOI":"10.1371\/journal.pone.0087907","volume":"9","author":"R Henriques","year":"2014","unstructured":"Henriques R, Potts WM, Santos CV, Sauer WHH, Shaw PW . (2014). Population connectivity and phylogeography of a coastal fish, Atractoscion aequidens (Sciaenidae), across the Benguela current region: evidence of an ancient vicariant event. PLoS One 9: e87907.","journal-title":"PLoS One"},{"key":"BFhdy201651_CR36","doi-asserted-by":"crossref","first-page":"423","DOI":"10.1080\/17451000.2014.952309","volume":"11","author":"R Henriques","year":"2015","unstructured":"Henriques R, Potts WM, Sauer WHH, Shaw PW . (2015). Incipient genetic isolation of a temperate migratory coastal sciaenid fish (Argyrosomus inodorus within the Benguela cold current system. Mar Biol Res 11: 423\u2013429.","journal-title":"Mar Biol Res"},{"key":"BFhdy201651_CR37","doi-asserted-by":"crossref","first-page":"158","DOI":"10.1016\/0169-5347(88)90033-X","volume":"3","author":"GM Hewitt","year":"1988","unstructured":"Hewitt GM . (1988). Hybrid zones\u2014natural laboratories for evolutionary studies. Trends Ecol Evol 3: 158\u2013167.","journal-title":"Trends Ecol Evol"},{"key":"BFhdy201651_CR38","doi-asserted-by":"crossref","first-page":"2785","DOI":"10.1073\/pnas.0611164104","volume":"104","author":"J Hey","year":"2007","unstructured":"Hey J, Nielsen R . (2007). Integration within the Felsenstein equation for improved Markov chain Monte Carlo methods in population genetics. Proc Natl Acad Sci USA 104: 2785\u20132790.","journal-title":"Proc Natl Acad Sci USA"},{"key":"BFhdy201651_CR39","doi-asserted-by":"crossref","first-page":"1561","DOI":"10.1093\/molbev\/msi145","volume":"22","author":"SYW Ho","year":"2005","unstructured":"Ho SYW, Phillips MJ, Cooper A, Drummond AJ . (2005). Time dependency of molecular rate estimates and systematic overestimation of recent divergence times. Mol Biol Evol 22: 1561\u20131568.","journal-title":"Mol Biol Evol"},{"key":"BFhdy201651_CR40","doi-asserted-by":"crossref","first-page":"960","DOI":"10.1111\/j.1755-0998.2010.02848.x","volume":"10","author":"TB Hoareau","year":"2010","unstructured":"Hoareau TB, Boissin E . (2010). Design of phylum\u2010specific hybrid primers for DNA barcoding: addressing the need for efficient COI amplification in the Echinodermata. Mol Ecol Res 10: 960\u2013967.","journal-title":"Mol Ecol Res"},{"key":"BFhdy201651_CR41","doi-asserted-by":"crossref","first-page":"449","DOI":"10.1093\/sysbio\/syv120","volume":"65","author":"TB Hoareau","year":"2016","unstructured":"Hoareau TB . (2016). Late-glacial demographic expansion motivates a clock overhaul for population genetics. Syst Biol 65: 449\u2013464.","journal-title":"Syst Biol"},{"key":"BFhdy201651_CR42","doi-asserted-by":"crossref","first-page":"1322","DOI":"10.1111\/j.1755-0998.2009.02591.x","volume":"9","author":"MJ Hubisz","year":"2009","unstructured":"Hubisz MJ, Falush D, Stephens M, Pritchard JK . (2009). Inferring weak population structure with the assistance of sample group information. Mol Ecol Res 9: 1322\u20131332.","journal-title":"Mol Ecol Res"},{"key":"BFhdy201651_CR43","doi-asserted-by":"crossref","first-page":"15","DOI":"10.1016\/j.pocean.2009.07.046","volume":"83","author":"L Hutchings","year":"2009","unstructured":"Hutchings L, van der Lingen CD, Shannon LJ, Crawford RJM, Verheye HMS, Bartholomae CH et al. (2009). The Benguela current: an ecosystem of four components. Prog Oceanogr 83: 15\u201332.","journal-title":"Prog Oceanogr"},{"key":"BFhdy201651_CR44","doi-asserted-by":"crossref","first-page":"365","DOI":"10.1071\/MF9960365","volume":"47","author":"F Juanes","year":"1996","unstructured":"Juanes F, Hare JA, Miskiewicz AG . (1996). Comparing early life history strategies of Pomatomus saltatrix: a global approach. Mar Fresh Res 47: 365\u2013379.","journal-title":"Mar Fresh Res"},{"key":"BFhdy201651_CR45","doi-asserted-by":"crossref","first-page":"2868","DOI":"10.1073\/pnas.75.6.2868","volume":"75","author":"M Kimura","year":"1978","unstructured":"Kimura M, Ohta T . (1978). Stepwise mutation model and distribution of allelic frequencies in a finite population. Proc Natl Acad Sci USA 75: 2868\u20132872.","journal-title":"Proc Natl Acad Sci USA"},{"key":"BFhdy201651_CR46","doi-asserted-by":"crossref","first-page":"239","DOI":"10.1046\/j.1365-2400.2001.00243.x","volume":"8","author":"CH Kirchner","year":"2001","unstructured":"Kirchner CH, Holtzhausen JA . (2001). Seasonal movements of silver kob, Argyrosomus inodorus, (Griffiths and Heemstra) in Namibian waters. Fish Manag Ecol 8: 239\u2013251.","journal-title":"Fish Manag Ecol"},{"key":"BFhdy201651_CR47","doi-asserted-by":"crossref","first-page":"4227","DOI":"10.1111\/j.1365-294X.2009.04331.x","volume":"18","author":"MHD Larmuseau","year":"2009","unstructured":"Larmuseau MHD, Raeymaekers JAM, Ruddick KG, van Houdt JKJ, Volckaert FAM . (2009). To see in different seas: spatial variation in the rhodopsin gene of the sand goby (Pomatoschistus minutus. Mol Ecol 18: 4227\u20134239.","journal-title":"Mol Ecol"},{"key":"BFhdy201651_CR48","doi-asserted-by":"crossref","first-page":"1451","DOI":"10.1093\/bioinformatics\/btp187","volume":"25","author":"P Librado","year":"2009","unstructured":"Librado P, Rozas J . (2009). DnaSP v5: as software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451\u20131452.","journal-title":"Bioinformatics"},{"key":"BFhdy201651_CR49","doi-asserted-by":"crossref","first-page":"108","DOI":"10.1890\/08-0257.1","volume":"89","author":"CA Maggs","year":"2008","unstructured":"Maggs CA, Castilho R, Foltz D, Henzler C, Jolly NT, Kelly J et al. (2008). Evaluating signatures of glacial refugia for North Atlantic benthic marine taxa. Ecology 89: 108\u2013122.","journal-title":"Ecology"},{"key":"BFhdy201651_CR50","doi-asserted-by":"crossref","first-page":"3223","DOI":"10.1111\/mec.13243","volume":"24","author":"G Meirmans","year":"2015","unstructured":"Meirmans G . (2015). Seven common mistakes in population genetics and how to avoid them. Mol Ecol 24: 3223\u20133231.","journal-title":"Mol Ecol"},{"key":"BFhdy201651_CR51","doi-asserted-by":"crossref","first-page":"1308","DOI":"10.1080\/00028487.2014.935480","volume":"143","author":"L Miralles","year":"2014","unstructured":"Miralles L, Juanes F, Garcia-Vazquez E . (2014a). Interoceanic sex-biased migration in bluefish. Trans Am Fish Soc 143: 1308\u20131315.","journal-title":"Trans Am Fish Soc"},{"key":"BFhdy201651_CR52","doi-asserted-by":"crossref","first-page":"578","DOI":"10.1080\/03632415.2014.976701","volume":"39","author":"L Miralles","year":"2014","unstructured":"Miralles L, Juanes F, Pardi\u00f1as AF, Garcia-Vazquez E . (2014b). Paleoclimate shaped bluefish structure in the northern hemisphere. Fisheries 39: 578\u2013586.","journal-title":"Fisheries"},{"key":"BFhdy201651_CR53","doi-asserted-by":"crossref","first-page":"477","DOI":"10.1577\/1548-8659(1974)103<477:DOYBPS>2.0.CO;2","volume":"103","author":"JJ Norcross","year":"1974","unstructured":"Norcross JJ, Richardson SL, Massmann WH, Joseph EB . (1974). Development of young bluefish (Pomatomus saltatrix and distribution of eggs and young in Virginian coastal waters. Trans Am Fish Soc 103: 477\u2013497.","journal-title":"Trans Am Fish Soc"},{"key":"BFhdy201651_CR54","doi-asserted-by":"crossref","first-page":"1799","DOI":"10.1111\/j.1365-294X.2004.02214.x","volume":"13","author":"PTO O\u2019Reilly","year":"2004","unstructured":"O\u2019Reilly PTO, Canino MF, Bailey KM, Bentzen P . (2004). Inverse relationship between FST and microsatellite polymorphism in the marine fish, walleye Pollock (Theragra chalcogramma: implications for resolving weak population structure. Mol Ecol 13: 1799\u20131814.","journal-title":"Mol Ecol"},{"key":"BFhdy201651_CR55","doi-asserted-by":"crossref","first-page":"547","DOI":"10.1146\/annurev.es.25.110194.002555","volume":"25","author":"SR Palumbi","year":"1994","unstructured":"Palumbi SR . (1994). Genetic divergence, reproductive isolation and marine speciation. Annu Rev Ecol Syst 25: 547\u2013572.","journal-title":"Annu Rev Ecol Syst"},{"key":"BFhdy201651_CR56","doi-asserted-by":"crossref","first-page":"1993","DOI":"10.1111\/j.1095-8649.2010.02774.x","volume":"77","author":"AF Pardi\u00f1as","year":"2010","unstructured":"Pardi\u00f1as AF, Campo D, Pola IG, Miralles L, Juanes F, Garcia\u2010Vazquez E . (2010). Climate change and oceanic barriers: genetic differentiation in Pomatomus saltatrix (Pisces: Pomatomidae) in the North Atlantic Ocean and the Mediterranean Sea. J Fish Biol 77: 1993\u20131998.","journal-title":"J Fish Biol"},{"key":"BFhdy201651_CR57","doi-asserted-by":"crossref","first-page":"945","DOI":"10.1093\/genetics\/155.2.945","volume":"155","author":"JK Pritchard","year":"2000","unstructured":"Pritchard JK, Stephens M, Donnelly P . (2000). Inference of population structure using multilocus genotype data. Genetics 155: 945\u2013959.","journal-title":"Genetics"},{"key":"BFhdy201651_CR58","doi-asserted-by":"crossref","first-page":"3061","DOI":"10.1002\/ece3.406","volume":"2","author":"N Qu\u00e9r\u00e9","year":"2012","unstructured":"Qu\u00e9r\u00e9 N, Desmarias E, Tsigenopoulos CS, Belkhir K, Bonhomme F, Guinand B . (2012). Gene flow at major transitional areas in sea bass (Dicentrarchus labrax and the possible emergence of a hybrid swarm. Ecol Evol 2: 3061\u20133078.","journal-title":"Ecol Evol"},{"key":"BFhdy201651_CR59","doi-asserted-by":"crossref","first-page":"223","DOI":"10.1111\/j.1558-5646.1989.tb04220.x","volume":"43","author":"WR Rice","year":"1989","unstructured":"Rice WR . (1989). Analyzing tables of statistical tests. Evolution 43: 223\u2013225.","journal-title":"Evolution"},{"key":"BFhdy201651_CR60","doi-asserted-by":"crossref","first-page":"103","DOI":"10.1111\/j.1471-8286.2007.01931.x","volume":"8","author":"F Rousset","year":"2008","unstructured":"Rousset F . (2008). Genepop'007: a complete reimplementation of Genepop software for Windows and Linux. Mol Ecol Res 8: 103\u2013106.","journal-title":"Mol Ecol Res"},{"key":"BFhdy201651_CR61","doi-asserted-by":"crossref","first-page":"1574","DOI":"10.1093\/molbev\/mst066","volume":"30","author":"C Roux","year":"2013","unstructured":"Roux C, Tsagkogeorga G, Bierne N, Galtier N . (2013). Crossing the species barrier: genomic hotspots of introgression between two highly divergent Ciona intestinalis species. Mol Biol Evol 30: 1574\u20131578.","journal-title":"Mol Biol Evol"},{"key":"BFhdy201651_CR62","doi-asserted-by":"crossref","first-page":"893","DOI":"10.1016\/j.ympev.2008.08.016","volume":"49","author":"HR Schwaninger","year":"2008","unstructured":"Schwaninger HR . (2008). Global mitochondrial DNA phylogeography and biogeographic history of the antitropically and longitudinally disjunct marine bryozoan Membranipora membranacea L. (Cheilostomata): Another cryptic sibling species complex? Mol Phylogenet Evol 49: 893\u2013908.","journal-title":"Mol Phylogenet Evol"},{"key":"BFhdy201651_CR63","doi-asserted-by":"crossref","first-page":"1000","DOI":"10.1093\/icesjms\/fss053","volume":"69","author":"A Sebast\u00e9s","year":"2012","unstructured":"Sebast\u00e9s A, Mart\u00edn P, Raya V . (2012). Changes in life-history traits in relation to climate change: bluefish (Pomatomus saltatrix in the northwestern Mediterranean. ICES J Mar Sci 69: 1000\u20131009.","journal-title":"ICES J Mar Sci"},{"key":"BFhdy201651_CR64","doi-asserted-by":"crossref","first-page":"4811","DOI":"10.1111\/j.1365-294X.2009.04404.x","volume":"18","author":"M Sala-Bozano","year":"2009","unstructured":"Sala-Bozano M, Ketmaier V, Mariani S . (2009). Contrasting signals from multiple markers illuminate population connectivity in a marine fish. Mol Ecol 18: 4811\u20134826.","journal-title":"Mol Ecol"},{"key":"BFhdy201651_CR65","doi-asserted-by":"crossref","first-page":"615","DOI":"10.1111\/j.1461-0248.2006.00889.x","volume":"9","author":"KA Selkoe","year":"2006","unstructured":"Selkoe KA, Toonen RJ . (2006). Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers. Ecol Lett 9: 615\u2013629.","journal-title":"Ecol Lett"},{"key":"BFhdy201651_CR66","doi-asserted-by":"crossref","first-page":"1171","DOI":"10.1111\/jbi.12275","volume":"41","author":"G Silva","year":"2014","unstructured":"Silva G, Horne JB, Castilho R . (2014a). Anchovies go north and west without losing diversity: post-glacial range expansions in a small pelagic fish. J Biogeogr 41: 1171\u20131182.","journal-title":"J Biogeogr"},{"key":"BFhdy201651_CR67","doi-asserted-by":"crossref","first-page":"20141093","DOI":"10.1098\/rspb.2014.1093","volume":"281","author":"G Silva","year":"2014","unstructured":"Silva G, Lima FP, Martel P, Castilho R . (2014b). Thermal adaptation and clinal mitochondrial DNA variation of European anchovy. Proc R Soc Lond B Biol Sci 281: 20141093.","journal-title":"Proc R Soc Lond B Biol Sci"},{"key":"BFhdy201651_CR68","doi-asserted-by":"crossref","first-page":"978","DOI":"10.1086\/319501","volume":"68","author":"M Stephens","year":"2001","unstructured":"Stephens M, Smith NJ, Donnelly P . (2001). A new statistical method for haplotype reconstruction from population data. Am J Hum Genet 68: 978\u2013989.","journal-title":"Am J Hum Genet"},{"key":"BFhdy201651_CR69","doi-asserted-by":"crossref","first-page":"1162","DOI":"10.1086\/379378","volume":"73","author":"M Stephens","year":"2003","unstructured":"Stephens M, Donnelly P . (2003). A comparison of Bayesian methods for haplotype reconstruction from population genotype data. Am J Hum Genet 73: 1162\u20131169.","journal-title":"Am J Hum Genet"},{"key":"BFhdy201651_CR70","doi-asserted-by":"crossref","first-page":"437","DOI":"10.1093\/genetics\/105.2.437","volume":"105","author":"F Tajima","year":"1983","unstructured":"Tajima F . (1983). Evolutionary relationship of DNA sequences in finite populations. Genetics 105: 437\u2013460.","journal-title":"Genetics"},{"key":"BFhdy201651_CR71","doi-asserted-by":"crossref","first-page":"2731","DOI":"10.1093\/molbev\/msr121","volume":"28","author":"K Tamura","year":"2011","unstructured":"Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S . (2011). MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28: 2731\u20132739.","journal-title":"Mol Biol Evol"},{"key":"BFhdy201651_CR72","doi-asserted-by":"crossref","first-page":"2029","DOI":"10.1007\/s00227-010-1471-z","volume":"157","author":"PR Teske","year":"2010","unstructured":"Teske PR, Forget FRG, Cowley PD, von der Heyden S, Beheregaray LB . (2010). Connectivity between marine reserves and exploited areas in the philopatric reef fish Chrysoblephus laticeps (Teleostei: Sparidae). Mar Biol 157: 2029\u20132042.","journal-title":"Mar Biol"},{"key":"BFhdy201651_CR73","doi-asserted-by":"crossref","first-page":"43","DOI":"10.4102\/sajs.v107i5\/6.514","volume":"107","author":"PR Teske","year":"2011","unstructured":"Teske PR, von der Heyden S, McQuaid CD, Barker NP . (2011). A review of marine phylogeography in southern Africa. S Afr J Sci 107: 43\u201353.","journal-title":"S Afr J Sci"},{"key":"BFhdy201651_CR74","doi-asserted-by":"crossref","first-page":"392","DOI":"10.1111\/jbi.12201","volume":"41","author":"PR Teske","year":"2014","unstructured":"Teske PR, Papadopoulos I, Barker NP, McQuaid CD, Beheregaray LB . (2014). Mitonuclear discordance in genetic structure across the Atlantic\/Indian Ocean biogeographical transition zone. J Biogeogr 41: 392\u2013401.","journal-title":"J Biogeogr"},{"key":"BFhdy201651_CR75","doi-asserted-by":"crossref","first-page":"4673","DOI":"10.1093\/nar\/22.22.4673","volume":"22","author":"JD Thompson","year":"1994","unstructured":"Thompson JD, Higgins DG, Gibson TJ . (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673\u20134680.","journal-title":"Nucleic Acids Res"},{"key":"BFhdy201651_CR76","unstructured":"Van der Elst R. (1976). Game Fish of the East Coast of South Africa. I. The Biology of the Elf, Pomatomus saltatrix (Linnaeus), in the Coastal Waters of Natal. Oceanographic Research Institute. South African Association for Marine Biological Research Investigational Report 44."},{"key":"BFhdy201651_CR77","doi-asserted-by":"crossref","first-page":"256","DOI":"10.1016\/0040-5809(75)90020-9","volume":"7","author":"GA Watterson","year":"1975","unstructured":"Watterson GA . (1975). On the number of segregating sites in genetical models without recombination. Theor Popul Biol 7: 256\u2013276.","journal-title":"Theor Popul Biol"},{"key":"BFhdy201651_CR78","first-page":"1358","volume":"38","author":"BS Weir","year":"1984","unstructured":"Weir BS, Cockerham CC . (1984). Estimating F-statistics for the analysis of population structure. Evolution 38: 1358\u20131370.","journal-title":"Evolution"},{"key":"BFhdy201651_CR79","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1046\/j.0962-1083.2001.01418.x","volume":"11","author":"L Zane","year":"2002","unstructured":"Zane L, Bargelloni L, Patarnello T . (2002). Strategies for microsatellite isolation: a review. Mol Ecol 11: 1\u201316.","journal-title":"Mol Ecol"}],"container-title":["Heredity"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/www.nature.com\/articles\/hdy201651.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/www.nature.com\/articles\/hdy201651","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/www.nature.com\/articles\/hdy201651.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,5,18]],"date-time":"2023-05-18T17:00:45Z","timestamp":1684429245000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.nature.com\/articles\/hdy201651"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,7,20]]},"references-count":79,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2016,11]]}},"alternative-id":["BFhdy201651"],"URL":"https:\/\/doi.org\/10.1038\/hdy.2016.51","relation":{},"ISSN":["0018-067X","1365-2540"],"issn-type":[{"value":"0018-067X","type":"print"},{"value":"1365-2540","type":"electronic"}],"subject":[],"published":{"date-parts":[[2016,7,20]]},"assertion":[{"value":"6 December 2015","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"9 May 2016","order":2,"name":"revised","label":"Revised","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"12 May 2016","order":3,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"20 July 2016","order":4,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"The authors declare no conflict of interest.","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}}]}}