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A total of 166 individuals from 1000 thermographic electronic medical records were classified into four groups: Group HP\u2009+\u2009FM-50 individuals with hypothyroidism and fibromyalgia; Group FM-56 individuals with fibromyalgia only; Group HP-30 individuals with hypothyroidism only, and Group Control-30 healthy individuals. The thermal images from the electronic medical records were acquired by a FLIR T650SC infrared camera (used for thermometry) and the temperature data for each group were statistically analyzed. Group HP\u2009+\u2009FM showed<jats:italic>r<\/jats:italic>\u2009=\u20090, meaning that the average temperatures of the thyroid and BAT are independent of each other. Groups FM, HP and Control showed<jats:italic>r<\/jats:italic>\u2009=\u20091, meaning that the average temperatures of the thyroid and BAT were directly related. Our findings showed that the average temperatures of the thyroid and BAT regions are similar. 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