{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,21]],"date-time":"2026-07-21T00:11:33Z","timestamp":1784592693360,"version":"3.55.0"},"reference-count":54,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2024,11,19]],"date-time":"2024-11-19T00:00:00Z","timestamp":1731974400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0"},{"start":{"date-parts":[[2024,11,19]],"date-time":"2024-11-19T00:00:00Z","timestamp":1731974400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0"}],"funder":[{"DOI":"10.13039\/501100003443","name":"Ministry of Education and Science of the Russian Federation","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100003443","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Sci Rep"],"DOI":"10.1038\/s41598-024-80065-2","type":"journal-article","created":{"date-parts":[[2024,11,19]],"date-time":"2024-11-19T13:38:56Z","timestamp":1732023536000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["A new cancer\/testis long noncoding RNA, the OTP-AS1 RNA"],"prefix":"10.1038","volume":"14","author":[{"given":"Iuliia K.","family":"Karnaukhova","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dmitrii E.","family":"Polev","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Larisa L.","family":"Krukovskaya","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrei A.","family":"Makashov","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alexey E.","family":"Masharsky","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Olga V.","family":"Nazarenko","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Irina V.","family":"Poverennaya","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vsevolod J.","family":"Makeev","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ekaterina B.","family":"Akulova","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrei P.","family":"Kozlov","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2024,11,19]]},"reference":[{"issue":"1","key":"80065_CR1","doi-asserted-by":"publisher","first-page":"143","DOI":"10.1016\/S0014-5793(01)03028-9","volume":"508","author":"AV Baranova","year":"2001","unstructured":"Baranova, A. V. et al. In silico screening for tumour-specific expressed sequences in human genome. FEBS Lett. 508(1), 143\u2013148 (2001).","journal-title":"FEBS Lett."},{"issue":"1","key":"80065_CR2","doi-asserted-by":"publisher","first-page":"17","DOI":"10.1159\/000084182","volume":"26","author":"LL Krukovskaja","year":"2005","unstructured":"Krukovskaja, L. L., Baranova, A., Tyezelova, T., Polev, D. E. & Kozlov, A. P. Experimental study of human expressed sequences newly identified in silico as tumor specific. Tumour Biol. 26(1), 17\u201324 (2005).","journal-title":"Tumour Biol."},{"issue":"1","key":"80065_CR3","doi-asserted-by":"publisher","first-page":"128","DOI":"10.37469\/0507-3758-2017-63-1-128-134","volume":"63","author":"YK Karnaukhova","year":"2017","unstructured":"Karnaukhova, Y. K., Polev, D. E., Krukovskaya, L. L. & Kozlov, A. P. The study of Orthopedia homeobox gene expression in different normal and tumor human tissues. Vopr Onkol. 63(1), 128\u201334 (2017).","journal-title":"Vopr Onkol."},{"key":"80065_CR4","doi-asserted-by":"publisher","DOI":"10.1038\/sdata.2017.112","volume":"4","author":"S Noguchi","year":"2017","unstructured":"Noguchi, S. et al. Data Descriptor: FANTOM5 CAGE profiles of human and mouse samples. Sci. Data 4, 170112. https:\/\/doi.org\/10.1038\/sdata.2017.112 (2017).","journal-title":"Sci. Data"},{"key":"80065_CR5","doi-asserted-by":"publisher","first-page":"756","DOI":"10.1186\/s13104-018-3856-x","volume":"11","author":"IE Vorontsov","year":"2018","unstructured":"Vorontsov, I. E. et al. Genome-wide map of human and mouse transcription factor binding sites aggregated from ChIP-Seq data. BMC Res. Notes 11, 756 (2018).","journal-title":"BMC Res. Notes"},{"issue":"D1","key":"80065_CR6","doi-asserted-by":"publisher","first-page":"252","DOI":"10.1093\/nar\/gkx1106","volume":"46","author":"IV Kulakovskiy","year":"2018","unstructured":"Kulakovskiy, I. V. et al. HOCOMOCO: Towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis. Nucleic Acids Res. 46(D1), 252\u2013259 (2018).","journal-title":"Nucleic Acids Res."},{"key":"80065_CR7","doi-asserted-by":"publisher","first-page":"421","DOI":"10.1186\/1471-2105-10-421","volume":"10","author":"C Camacho","year":"2008","unstructured":"Camacho, C. et al. BLAST+: Architecture and applications. BMC Bioinform. 10, 421 (2008).","journal-title":"BMC Bioinform."},{"issue":"1","key":"80065_CR8","doi-asserted-by":"publisher","first-page":"110","DOI":"10.1101\/gr.097857.109","volume":"20","author":"KS Pollard","year":"2010","unstructured":"Pollard, K. S., Hubisz, M. J. & Siepel, A. Detection of non-neutral substitution rates on mammalian phylogenies. Genome Res. 20(1), 110\u2013121 (2010).","journal-title":"Genome Res."},{"issue":"1","key":"80065_CR9","doi-asserted-by":"publisher","first-page":"96","DOI":"10.1006\/geno.1999.5882","volume":"60","author":"X Lin","year":"1999","unstructured":"Lin, X. et al. Identification, chromosomal assignment, and expression analysis of the human homeodomain-containing gene Orthopedia (OTP). Genomics 60(1), 96\u2013104 (1999).","journal-title":"Genomics"},{"issue":"8","key":"80065_CR10","doi-asserted-by":"publisher","first-page":"2197","DOI":"10.1158\/1078-0432.CCR-12-3078","volume":"19","author":"DR Swarts","year":"2013","unstructured":"Swarts, D. R. et al. CD44 and OTP are strong prognostic markers for pulmonary carcinoids. Clin. Cancer Res. 19(8), 2197\u20132207 (2013).","journal-title":"Clin. Cancer Res."},{"issue":"6","key":"80065_CR11","doi-asserted-by":"publisher","first-page":"738","DOI":"10.1097\/PAS.0000000000000621","volume":"40","author":"D Nonaka","year":"2016","unstructured":"Nonaka, D., Papaxoinis, G. & Mansoor, W. Diagnostic utility of orthopedia homeobox (OTP) in pulmonary carcinoid tumors. Am. J. Surg. Pathol. 40(6), 738\u2013744 (2016).","journal-title":"Am. J. Surg. Pathol."},{"key":"80065_CR12","unstructured":"The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group. The transcriptional landscape of the mammalian genome. Science 309, 1559\u201363 (2005)."},{"key":"80065_CR13","doi-asserted-by":"publisher","first-page":"626","DOI":"10.1038\/ng1789","volume":"38","author":"P Carninci","year":"2006","unstructured":"Carninci, P. et al. Genome-wide analysis of mammalian promoter architecture and evolution. Nat. Genet. 38, 626\u2013635 (2006).","journal-title":"Nat. Genet."},{"issue":"8","key":"80065_CR14","first-page":"1116","volume":"1849","author":"YM Danino","year":"2015","unstructured":"Danino, Y. M., Even, D., Ideses, D. & Juven-Gershon, T. The core promoter: At the heart of gene expression. BBA 1849(8), 1116\u20131131 (2015).","journal-title":"BBA"},{"key":"80065_CR15","doi-asserted-by":"publisher","first-page":"462","DOI":"10.1038\/nature13182","volume":"507","author":"ARR Forrest","year":"2014","unstructured":"Forrest, A. R. R. et al. A promoter-level mammalian expression atlas. Nature 507, 462\u2013470 (2014).","journal-title":"Nature"},{"key":"80065_CR16","doi-asserted-by":"publisher","first-page":"449","DOI":"10.1146\/annurev.biochem.72.121801.161520","volume":"72","author":"ST Smale","year":"2003","unstructured":"Smale, S. T. & Kadonaga, J. T. The RNA polimerase II core promoter. Annu. Rev. Biochem. 72, 449\u2013479 (2003).","journal-title":"Annu. Rev. Biochem."},{"issue":"22","key":"80065_CR17","doi-asserted-by":"publisher","first-page":"3020","DOI":"10.1101\/gad.11.22.3020","volume":"11","author":"TW Burke","year":"1997","unstructured":"Burke, T. W. & Kadonaga, J. T. The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila. Genes Dev. 11(22), 3020\u201331 (1997).","journal-title":"Genes Dev."},{"key":"80065_CR18","doi-asserted-by":"publisher","unstructured":"Yevshin, I., Sharipov, R., Kolmykov, S., Kondrakhin, Y. & Kolpakov, F. GTRD: A database on gene transcription regulation-2019 update. Nucleic Acids Res. 47(D1), D100\u2013D105. https:\/\/doi.org\/10.1093\/nar\/gky1128 (2019).","DOI":"10.1093\/nar\/gky1128"},{"key":"80065_CR19","doi-asserted-by":"publisher","first-page":"D316","DOI":"10.1093\/nar\/gkab996","volume":"7","author":"F Hammal","year":"2022","unstructured":"Hammal, F., de Langen, P., Bergon, A., Lopez, F. & Ballester, B. ReMap 2022: A database of Human, Mouse, Drosophila and Arabidopsis regulatory regions from an integrative analysis of DNA-binding sequencing experiments. Nucleic Acids Res. 7, D316\u2013D325 (2022).","journal-title":"Nucleic Acids Res."},{"issue":"3","key":"80065_CR20","doi-asserted-by":"publisher","first-page":"287","DOI":"10.1038\/s41419-022-04747-3","volume":"13","author":"M Liu","year":"2022","unstructured":"Liu, M. et al. RBMS1 promotes gastric cancer metastasis through autocrine IL-6\/JAK2\/STAT3 signaling. Cell Death Dis. 13(3), 287 (2022).","journal-title":"Cell Death Dis."},{"issue":"7766","key":"80065_CR21","doi-asserted-by":"publisher","first-page":"505","DOI":"10.1038\/s41586-019-1338-5","volume":"571","author":"M Cardoso-Moreira","year":"2019","unstructured":"Cardoso-Moreira, M. et al. Gene expression across mammalian organ development. Nature 571(7766), 505\u2013509 (2019).","journal-title":"Nature"},{"issue":"2","key":"80065_CR22","doi-asserted-by":"publisher","first-page":"90","DOI":"10.1186\/1479-7364-5-2-90","volume":"5","author":"MW Wright","year":"2011","unstructured":"Wright, M. W. & Bruford, E. A. Naming \u201cjunk\u201d: Human non-protein coding RNA (ncRNA) gene nomenclature. Hum. Genom. 5(2), 90\u201398 (2011).","journal-title":"Hum. Genom."},{"issue":"1","key":"80065_CR23","doi-asserted-by":"publisher","first-page":"7","DOI":"10.1186\/1479-7364-8-7","volume":"8","author":"MW Wright","year":"2014","unstructured":"Wright, M. W. A short guide to long non-coding RNA gene nomenclature. Hum. Genom. 8(1), 7 (2014).","journal-title":"Hum. Genom."},{"issue":"1","key":"80065_CR24","doi-asserted-by":"publisher","first-page":"1376","DOI":"10.1002\/wrna.1376","volume":"8","author":"A Nitsche","year":"2017","unstructured":"Nitsche, A. & Stadler, P. F. Evolutionary clues in lncRNAs. Wiley Interdiscip. Rev. RNA. 8(1), 1376 (2017).","journal-title":"Wiley Interdiscip. Rev. RNA."},{"key":"80065_CR25","doi-asserted-by":"publisher","first-page":"39","DOI":"10.1186\/1471-2164-8-39","volume":"8","author":"JN Hutchinson","year":"2007","unstructured":"Hutchinson, J. N. et al. A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains. BMC Genom. 8, 39 (2007).","journal-title":"BMC Genom."},{"issue":"Suppl 7","key":"80065_CR26","doi-asserted-by":"publisher","first-page":"14","DOI":"10.1186\/1471-2105-14-S7-S14","volume":"14","author":"S Basu","year":"2013","unstructured":"Basu, S., M\u00fcller, F. & Sanges, R. Examples of sequence conservation analyses capture a subset of mouse long non-coding RNAs sharing homology with fish conserved genomic elements. BMC Bioinform. 14(Suppl 7), 14 (2013).","journal-title":"BMC Bioinform."},{"issue":"3","key":"80065_CR27","doi-asserted-by":"publisher","first-page":"1063","DOI":"10.1016\/j.bbagen.2013.10.035","volume":"1840","author":"P Johnsson","year":"2014","unstructured":"Johnsson, P., Lipovich, L., Grand\u00e9r, D. & Morris, K. V. Evolutionary conservation of long noncoding RNAs; sequence, structure, function. Biochim. Biophys. Acta 1840(3), 1063\u20131071 (2014).","journal-title":"Biochim. Biophys. Acta"},{"issue":"2","key":"80065_CR28","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0056162","volume":"8","author":"N Samusik","year":"2013","unstructured":"Samusik, N., Krukovskaya, L., Meln, I., Shilov, E. & Kozlov, A. P. PBOV1 is a human de novo gene with tumor-specific expression that is associated with a positive clinical outcome of cancer. PLoS ONE 8(2), e56162 (2013).","journal-title":"PLoS ONE"},{"key":"80065_CR29","doi-asserted-by":"publisher","DOI":"10.1155\/2014\/398097","volume":"2014","author":"DE Polev","year":"2014","unstructured":"Polev, D. E., Karnaukhova, I. K., Krukovskaya, L. L. & Kozlov, A. P. ELFN1-AS1: A novel primate gene with possible MicroRNA function expressed predominantly in human tumors. Biomed. Res. Int. 2014, 398097 (2014).","journal-title":"Biomed. Res. Int."},{"key":"80065_CR30","first-page":"105","volume":"2013","author":"PV Dobrynin","year":"2013","unstructured":"Dobrynin, P. V., Matyunina, E. A., Malov, S. V. & Kozlov, A. P. The novelty of human cancer\/testis antigen encoding genes in evolution. Int. J. Genom. 2013, 105\u2013108 (2013).","journal-title":"Int. J. Genom."},{"key":"80065_CR31","doi-asserted-by":"publisher","first-page":"34","DOI":"10.1186\/s13027-016-0077-6","volume":"11","author":"AP Kozlov","year":"2016","unstructured":"Kozlov, A. P. Expression of evolutionarily novel genes in tumors. Infect. Agent Cancer 11, 34 (2016).","journal-title":"Infect. Agent Cancer"},{"issue":"36","key":"80065_CR32","doi-asserted-by":"publisher","first-page":"13427","DOI":"10.1073\/pnas.0603042103","volume":"103","author":"XH-F Zhang","year":"2006","unstructured":"Zhang, X.H.-F. & Chasin, L. A. Comparison of multiple vertebrate genomes reveals the birth and evolution of human exons. Proc. Natl. Acad. Sci. USA 103(36), 13427\u201313432 (2006).","journal-title":"Proc. Natl. Acad. Sci. USA"},{"key":"80065_CR33","doi-asserted-by":"publisher","first-page":"2737","DOI":"10.1093\/hmg\/ddh301","volume":"13","author":"A Pavlicek","year":"2004","unstructured":"Pavlicek, A. et al. Evolution of the tumor suppressor BRCA1 locus in primates: Implications for cancer predisposition. Hum. Mol. Genet. 13, 2737\u20132751 (2004).","journal-title":"Hum. Mol. Genet."},{"key":"80065_CR34","doi-asserted-by":"publisher","first-page":"0653","DOI":"10.1371\/journal.pbio.0020126","volume":"2","author":"N Kouprina","year":"2004","unstructured":"Kouprina, N. et al. Accelerated evolution of the ASPM gene controlling brain size begins prior to human brain expansion. PLoS Biol. 2, 0653\u20130663 (2004).","journal-title":"PLoS Biol."},{"key":"80065_CR35","doi-asserted-by":"publisher","first-page":"59","DOI":"10.1186\/1741-7007-11-59","volume":"11","author":"AE Kornienko","year":"2013","unstructured":"Kornienko, A. E., Guenzl, P. M., Barlow, D. P. & Pauler, F. M. Gene regulation by the act of long non-coding RNA transcription. BMC Biol. 11, 59 (2013).","journal-title":"BMC Biol."},{"key":"80065_CR36","doi-asserted-by":"publisher","DOI":"10.15252\/embr.201846955","volume":"19","author":"SJ Liu","year":"2018","unstructured":"Liu, S. J. & Lim, D. A. Modulating the expression of long non-coding RNAs for functional studies. EMBO Rep. 19, e46955 (2018).","journal-title":"EMBO Rep."},{"issue":"3","key":"80065_CR37","doi-asserted-by":"publisher","first-page":"393","DOI":"10.1016\/j.cell.2018.01.011","volume":"172","author":"F Kopp","year":"2018","unstructured":"Kopp, F. & Mendell, J. T. Functional classification and experimental dissection of long noncoding RNAs. Cell 172(3), 393\u2013407. https:\/\/doi.org\/10.1016\/j.cell.2018.01.011 (2018).","journal-title":"Cell"},{"key":"80065_CR38","doi-asserted-by":"publisher","first-page":"452","DOI":"10.1038\/nature20149","volume":"539","author":"JM Engreitz","year":"2016","unstructured":"Engreitz, J. M. et al. Local regulation of gene expression by lncRNA promoters, transcription and splicing. Nature 539, 452\u2013455 (2016).","journal-title":"Nature"},{"key":"80065_CR39","doi-asserted-by":"publisher","first-page":"1775","DOI":"10.1101\/gr.132159.111","volume":"22","author":"T Derrien","year":"2012","unstructured":"Derrien, T. et al. The GENCODE v7 catalog of human long noncoding RNAs: Analysis of their gene structure, evolution, and expression. Genome Res. 22, 1775\u20131789 (2012).","journal-title":"Genome Res."},{"issue":"4","key":"80065_CR40","doi-asserted-by":"publisher","first-page":"1093","DOI":"10.1534\/genetics.119.302661","volume":"213","author":"KN Smith","year":"2019","unstructured":"Smith, K. N., Miller, S. C., Varani, G., Calabrese, J. M. & Magnuson, T. Multimodal long noncoding RNA interaction networks: Control panels for cell fate specification. Genetics 213(4), 1093\u20131110 (2019).","journal-title":"Genetics"},{"key":"80065_CR41","doi-asserted-by":"publisher","first-page":"10499","DOI":"10.1038\/ncomms10499","volume":"7","author":"C Wang","year":"2016","unstructured":"Wang, C. et al. Systematic identification of genes with a cancer-testis expression pattern in 19 cancer types. Nat. Commun. 7, 10499 (2016).","journal-title":"Nat. Commun."},{"key":"80065_CR42","doi-asserted-by":"publisher","first-page":"183","DOI":"10.3389\/fgene.2013.00183","volume":"4","author":"EJ Wood","year":"2013","unstructured":"Wood, E. J., Chin-Inmanu, K., Jia, H. & Lipovich, L. Sense-antisense gene pairs: Sequence, transcription, and structure are not conserved between human and mouse. Front. Genet. 4, 183 (2013).","journal-title":"Front. Genet."},{"issue":"24","key":"80065_CR43","doi-asserted-by":"publisher","first-page":"5294","DOI":"10.1021\/bi00591a005","volume":"18","author":"JM Chirgwin","year":"1979","unstructured":"Chirgwin, J. M., Przybyla, A. E., MacDonald, R. J. & Rutter, W. J. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 18(24), 5294\u20135299 (1979).","journal-title":"Biochemistry"},{"key":"80065_CR44","unstructured":"Sambrook, J. & Russel, D.W. Molecular Cloning: A Laboratory Manual, 3rd edn (Cold Spring Harbor Laboratory Press, 2001)."},{"issue":"Suppl1","key":"80065_CR45","doi-asserted-by":"publisher","first-page":"22","DOI":"10.1186\/1752-0509-6-S1-S22","volume":"6","author":"M Zhang","year":"2012","unstructured":"Zhang, M. & Leong, H. W. BBH-LS: An algorithm for computing positional homologs using sequence and gene context similarity. BMC Syst. Biol. 6(Suppl1), 22 (2012).","journal-title":"BMC Syst. Biol."},{"issue":"19","key":"80065_CR46","doi-asserted-by":"publisher","first-page":"2487","DOI":"10.1093\/bioinformatics\/btt403","volume":"29","author":"TJ Wheeler","year":"2013","unstructured":"Wheeler, T. J. & Eddy, S. R. nhmmer: DNA homology search with profile HMMs. Bioinformatics 29(19), 2487\u20132489 (2013).","journal-title":"Bioinformatics"},{"key":"80065_CR47","doi-asserted-by":"crossref","unstructured":"Pearson, W. R. An introduction to sequence similarity (\u201cHomology\u201d) searching. Curr. Protoc. Bioinform. (2013).","DOI":"10.1002\/0471250953.bi0301s42"},{"key":"80065_CR48","doi-asserted-by":"publisher","first-page":"39","DOI":"10.1007\/978-1-59745-251-9_3","volume":"537","author":"K Katoh","year":"2009","unstructured":"Katoh, K., Asimenos, G. & Toh, H. Multiple alignment of DNA sequences with MAFFT. Methods Mol. Biol. 537, 39\u201364 (2009).","journal-title":"Methods Mol. Biol."},{"issue":"4","key":"80065_CR49","doi-asserted-by":"publisher","first-page":"772","DOI":"10.1093\/molbev\/mst010","volume":"30","author":"K Katoh","year":"2013","unstructured":"Katoh, K. & Standley, D. M. MAFFT multiple sequence alignment software version 7: Improvements in performance and usability. Mol. Biol. Evol. 30(4), 772\u2013780 (2013).","journal-title":"Mol. Biol. Evol."},{"key":"80065_CR50","doi-asserted-by":"publisher","first-page":"754","DOI":"10.1093\/bioinformatics\/17.8.754","volume":"17","author":"JP Huelsenbeck","year":"2001","unstructured":"Huelsenbeck, J. P. & Ronquist, F. Bayesian inference of phylogenetic trees. Bioinformatics 17, 754\u2013755 (2001).","journal-title":"Bioinformatics"},{"key":"80065_CR51","doi-asserted-by":"publisher","first-page":"1572","DOI":"10.1093\/bioinformatics\/btg180","volume":"19","author":"F Ronquist","year":"2003","unstructured":"Ronquist, F. & Huelsenbeck, J. P. Mrbayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572\u20131574 (2003).","journal-title":"Bioinformatics"},{"key":"80065_CR52","doi-asserted-by":"publisher","first-page":"22","DOI":"10.1186\/s13059-014-0560-6","volume":"16","author":"M Lizio","year":"2015","unstructured":"Lizio, M. et al. Gateways to the FANTOM5 promoter level mammalian expression atlas. Genome Biol. 16, 22. https:\/\/doi.org\/10.1186\/s13059-014-0560-6 (2015).","journal-title":"Genome Biol."},{"key":"80065_CR53","unstructured":"Gentleman, R. & Falcon, S. MicroRNA: Data and Functions for Dealing with MicroRNAs. R Package Version 1.62.0 (2024)."},{"key":"80065_CR54","doi-asserted-by":"publisher","first-page":"W361","DOI":"10.1093\/nar\/gku406","volume":"42","author":"I Paz","year":"2014","unstructured":"Paz, I., Kosti, I., Ares, M., Cline, M. & Mandel-Gutfreund, Y. RBPmap: A web server for mapping binding sites of RNA-binding proteins. Nucleic Acids Res. 42, W361\u2013W367 (2014).","journal-title":"Nucleic Acids Res."}],"updated-by":[{"DOI":"10.1038\/s41598-025-98337-w","type":"correction","label":"Correction","source":"publisher","updated":{"date-parts":[[2025,4,23]],"date-time":"2025-04-23T00:00:00Z","timestamp":1745366400000}}],"container-title":["Scientific Reports"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.nature.com\/articles\/s41598-024-80065-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/www.nature.com\/articles\/s41598-024-80065-2","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/www.nature.com\/articles\/s41598-024-80065-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,4,23]],"date-time":"2025-04-23T11:03:59Z","timestamp":1745406239000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.nature.com\/articles\/s41598-024-80065-2"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,11,19]]},"references-count":54,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2024,12]]}},"alternative-id":["80065"],"URL":"https:\/\/doi.org\/10.1038\/s41598-024-80065-2","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/350793","asserted-by":"object"}]},"ISSN":["2045-2322"],"issn-type":[{"value":"2045-2322","type":"electronic"}],"subject":[],"published":{"date-parts":[[2024,11,19]]},"assertion":[{"value":"8 April 2024","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"14 November 2024","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"19 November 2024","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"23 April 2025","order":4,"name":"change_date","label":"Change Date","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"Correction","order":5,"name":"change_type","label":"Change Type","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"A Correction to this paper has been published:","order":6,"name":"change_details","label":"Change Details","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"https:\/\/doi.org\/10.1038\/s41598-025-98337-w","URL":"https:\/\/doi.org\/10.1038\/s41598-025-98337-w","order":7,"name":"change_details","label":"Change Details","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"The authors declare no competing interests.","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}}],"article-number":"28676"}}