{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,19]],"date-time":"2026-06-19T14:43:32Z","timestamp":1781880212971,"version":"3.54.5"},"reference-count":82,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2026,2,9]],"date-time":"2026-02-09T00:00:00Z","timestamp":1770595200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0"},{"start":{"date-parts":[[2026,3,2]],"date-time":"2026-03-02T00:00:00Z","timestamp":1772409600000},"content-version":"vor","delay-in-days":21,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Sci Rep"],"DOI":"10.1038\/s41598-024-80606-9","type":"journal-article","created":{"date-parts":[[2026,2,9]],"date-time":"2026-02-09T10:27:29Z","timestamp":1770632849000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["Microbial membrane transport genes in maize rhizosphere under fertilization \u2013 a preliminary study"],"prefix":"10.1038","volume":"16","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-0865-8336","authenticated-orcid":false,"given":"Matthew Chekwube","family":"Enebe","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Olubukola Oluranti","family":"Babalola","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,2,9]]},"reference":[{"key":"80606_CR1","doi-asserted-by":"publisher","first-page":"109019","DOI":"10.1016\/j.soilbio.2023.109019","volume":"180","author":"S Tang","year":"2023","unstructured":"Tang, S. et al. Microbial community succession in soil is mainly driven by carbon and nitrogen contents rather than phosphorus and sulphur contents. Soil Biol. Biochem. 180, 109019 (2023).","journal-title":"Soil Biol. Biochem."},{"key":"80606_CR2","doi-asserted-by":"publisher","first-page":"1354","DOI":"10.1890\/05-1839","volume":"88","author":"N Fierer","year":"2007","unstructured":"Fierer, N., Bradford, M. A. & Jackson, R. B. toward an ecological classification of soil bacteria. Ecology 88, 1354\u20131364 (2007).","journal-title":"Ecology"},{"key":"80606_CR3","doi-asserted-by":"publisher","first-page":"e01290","DOI":"10.1128\/spectrum.01290-22","volume":"10","author":"F Sa\u00efdi","year":"2022","unstructured":"Sa\u00efdi, F. et al. Bacterial outer membrane polysaccharide export (OPX) proteins occupy three structural classes with selective \u03b2-barrel porin requirements for polymer secretion. Microbiol. Spectr. 10, e01290\u2013e01222 (2022).","journal-title":"Microbiol. Spectr."},{"key":"80606_CR4","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s13568-021-01182-z","volume":"11","author":"MC Enebe","year":"2021","unstructured":"Enebe, M. C. & Babalola, O. O. Soil fertilization affects the abundance and distribution of carbon and nitrogen cycling genes in the maize rhizosphere. AMB Express. 11, 1\u201310 (2021).","journal-title":"AMB Express"},{"key":"80606_CR5","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s13213-020-01591-8","volume":"70","author":"MC Enebe","year":"2020","unstructured":"Enebe, M. C. & Babalola, O. O. Effects of inorganic and organic treatments on the microbial community of maize rhizosphere by a shotgun metagenomics approach. Ann. Microbiol. 70, 1\u201310 (2020).","journal-title":"Ann. Microbiol."},{"key":"80606_CR6","doi-asserted-by":"publisher","first-page":"1022","DOI":"10.3390\/genes12071022","volume":"12","author":"MC Enebe","year":"2021","unstructured":"Enebe, M. C. & Babalola, O. O. The influence of Soil fertilization on the distribution and diversity of Phosphorus Cycling genes and Microbes Community of Maize Rhizosphere using Shotgun Metagenomics. Genes 12, 1022 (2021).","journal-title":"Genes"},{"key":"80606_CR7","doi-asserted-by":"publisher","first-page":"1048","DOI":"10.1101\/gr.8.10.1048","volume":"8","author":"K Tomii","year":"1998","unstructured":"Tomii, K. & Kanehisa, M. A comparative analysis of ABC transporters in complete microbial genomes. Genome Res. 8, 1048\u20131059 (1998).","journal-title":"Genome Res."},{"key":"80606_CR8","doi-asserted-by":"publisher","first-page":"868","DOI":"10.1016\/j.bbamem.2017.08.011","volume":"1860","author":"KJ Tanaka","year":"2018","unstructured":"Tanaka, K. J., Song, S., Mason, K. & Pinkett, H. W. Selective substrate uptake: the role of ATP-binding cassette (ABC) importers in pathogenesis. Biochim. et Biophys. Acta (BBA)-Biomembranes. 1860, 868\u2013877 (2018).","journal-title":"Biochim. et Biophys. Acta (BBA)-Biomembranes"},{"key":"80606_CR9","doi-asserted-by":"publisher","first-page":"451","DOI":"10.1038\/323451a0","volume":"323","author":"R Doolittle","year":"1986","unstructured":"Doolittle, R. et al. Domainal evolution of a prokaryotic DNA repair protein and its relationship to active-transport proteins. Nature 323, 451\u2013453 (1986).","journal-title":"Nature"},{"key":"80606_CR10","doi-asserted-by":"crossref","unstructured":"Wilmaerts, D., Focant, C., Matthay, P. & Michiels, J. Transcription-coupled DNA repair underlies variation in persister awakening and the emergence of resistance. Cell. Rep. 38 (2022).","DOI":"10.1016\/j.celrep.2022.110427"},{"key":"80606_CR11","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.gene.2011.03.008","volume":"482","author":"B Resende","year":"2011","unstructured":"Resende, B. et al. DNA repair in Corynebacterium model. Gene 482, 1\u20137 (2011).","journal-title":"Gene"},{"key":"80606_CR12","doi-asserted-by":"publisher","first-page":"5","DOI":"10.1046\/j.1365-2958.1998.00764.x","volume":"28","author":"KJ Linton","year":"1998","unstructured":"Linton, K. J. & Higgins, C. F. The Escherichia coli ATP-binding cassette (ABC) proteins. Mol. Microbiol. 28, 5\u201313 (1998).","journal-title":"Mol. Microbiol."},{"key":"80606_CR13","doi-asserted-by":"publisher","first-page":"81","DOI":"10.1016\/S0065-2911(08)60130-7","volume":"40","author":"MH Saier Jr","year":"1998","unstructured":"Saier, M. H. Jr Molecular phylogeny as a basis for the classification of transport proteins from bacteria, archaea and eukarya. Adv. Microb. Physiol. 40, 81\u2013136 (1998).","journal-title":"Adv. Microb. Physiol."},{"key":"80606_CR14","doi-asserted-by":"publisher","first-page":"67","DOI":"10.1146\/annurev-genet-120215-035146","volume":"50","author":"LD Palmer","year":"2016","unstructured":"Palmer, L. D. & Skaar, E. P. Transition metals and virulence in bacteria. Annu. Rev. Genet. 50, 67\u201391 (2016).","journal-title":"Annu. Rev. Genet."},{"key":"80606_CR15","doi-asserted-by":"publisher","first-page":"687","DOI":"10.1007\/s10534-011-9421-x","volume":"24","author":"E Aguilar-Barajas","year":"2011","unstructured":"Aguilar-Barajas, E., D\u00edaz-P\u00e9rez, C., Ram\u00edrez-D\u00edaz, M. I., Riveros-Rosas, H. & Cervantes, C. Bacterial transport of sulfate, molybdate, and related oxyanions. Biometals 24, 687\u2013707 (2011).","journal-title":"Biometals"},{"key":"80606_CR16","doi-asserted-by":"publisher","first-page":"246","DOI":"10.1126\/science.1156213","volume":"321","author":"S Gerber","year":"2008","unstructured":"Gerber, S., Comellas-Bigler, M., Goetz, B. A. & Locher, K. P. Structural basis of trans-inhibition in a molybdate\/tungstate ABC transporter. Science 321, 246\u2013250 (2008).","journal-title":"Science"},{"key":"80606_CR17","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1007\/s002030100298","volume":"176","author":"JR van der Ploeg","year":"2001","unstructured":"van der Ploeg, J. R., Eichhorn, E. & Leisinger, T. Sulfonate-sulfur metabolism and its regulation in Escherichia coli. Arch. Microbiol. 176, 1\u20138 (2001).","journal-title":"Arch. Microbiol."},{"key":"80606_CR18","doi-asserted-by":"publisher","first-page":"2953","DOI":"10.1016\/j.febslet.2005.04.017","volume":"579","author":"F Scheffel","year":"2005","unstructured":"Scheffel, F. et al. Structure of the ATPase subunit CysA of the putative sulfate ATP-binding cassette (ABC) transporter from Alicyclobacillus acidocaldarius. FEBS Lett. 579, 2953\u20132958 (2005).","journal-title":"FEBS Lett."},{"key":"80606_CR19","doi-asserted-by":"publisher","first-page":"e00183","DOI":"10.1128\/JB.00183-17","volume":"199","author":"MC Hoffmann","year":"2017","unstructured":"Hoffmann, M. C., Pf\u00e4nder, Y., Tintel, M. & Masepohl, B. Bacterial PerO permeases transport sulfate and related oxyanions. J. Bacteriol. 199, e00183\u2013e00117 (2017).","journal-title":"J. Bacteriol."},{"key":"80606_CR20","doi-asserted-by":"publisher","first-page":"4149","DOI":"10.1093\/emboj\/18.15.4149","volume":"18","author":"Y Park","year":"1999","unstructured":"Park, Y., Cho, Y. J., Ahn, T. & Park, C. Molecular interactions in ribose transport: the binding protein module symmetrically associates with the homodimeric membrane transporter. EMBO J. 18, 4149\u20134156 (1999).","journal-title":"EMBO J."},{"key":"80606_CR21","doi-asserted-by":"crossref","unstructured":"Orelle, C., Ayvaz, T., Everly, R. M., Klug, C. S. & Davidson, A. L. Both maltose-binding protein and ATP are required for nucleotide-binding domain closure in the intact maltose ABC transporter. Proceedings of the National Academy of Sciences 105, 12837\u201312842 (2008).","DOI":"10.1073\/pnas.0803799105"},{"key":"80606_CR22","doi-asserted-by":"publisher","first-page":"17521","DOI":"10.1074\/jbc.M109.006270","volume":"284","author":"M Grote","year":"2009","unstructured":"Grote, M. et al. Transmembrane signaling in the maltose ABC transporter MalFGK2-E: periplasmic MalF-P2 loop communicates substrate availability to the ATP-bound MalK dimer. J. Biol. Chem. 284, 17521\u201317526 (2009).","journal-title":"J. Biol. Chem."},{"key":"80606_CR23","doi-asserted-by":"publisher","first-page":"343","DOI":"10.1128\/JB.186.2.343-350.2004","volume":"186","author":"T Koyanagi","year":"2004","unstructured":"Koyanagi, T., Katayama, T., Suzuki, H. & Kumagai, H. Identification of the LIV-I\/LS system as the third phenylalanine transporter in Escherichia coli K-12. J. Bacteriol. 186, 343\u2013350 (2004).","journal-title":"J. Bacteriol."},{"key":"80606_CR24","doi-asserted-by":"publisher","first-page":"259","DOI":"10.1016\/S0923-2508(01)01197-4","volume":"152","author":"AH Hosie","year":"2001","unstructured":"Hosie, A. H. & Poole, P. S. Bacterial ABC transporters of amino acids. Res. Microbiol. 152, 259\u2013270 (2001).","journal-title":"Res. Microbiol."},{"key":"80606_CR25","doi-asserted-by":"publisher","first-page":"505","DOI":"10.1016\/j.resmic.2013.03.016","volume":"164","author":"R Kudva","year":"2013","unstructured":"Kudva, R. et al. Protein translocation across the inner membrane of Gram-negative bacteria: the Sec and Tat dependent protein transport pathways. Res. Microbiol. 164, 505\u2013534 (2013).","journal-title":"Res. Microbiol."},{"key":"80606_CR26","doi-asserted-by":"publisher","first-page":"620","DOI":"10.1039\/B915435C","volume":"6","author":"P Bechtluft","year":"2010","unstructured":"Bechtluft, P., Nouwen, N., Tans, S. J. & Driessen, A. J. SecB\u2014a chaperone dedicated to protein translocation. Mol. Biosyst. 6, 620\u2013627 (2010).","journal-title":"Mol. Biosyst."},{"key":"80606_CR27","doi-asserted-by":"publisher","first-page":"59","DOI":"10.3390\/microorganisms8010059","volume":"8","author":"B Khadka","year":"2020","unstructured":"Khadka, B., Persaud, D. & Gupta, R. S. Novel sequence feature of SecA translocase protein unique to the thermophilic bacteria: bioinformatics analyses to investigate their potential roles. Microorganisms 8, 59 (2020).","journal-title":"Microorganisms"},{"key":"80606_CR28","first-page":"1461","volume":"1862","author":"H Dong","year":"2017","unstructured":"Dong, H., Tang, X., Zhang, Z. & Dong, C. Structural insight into lipopolysaccharide transport from the Gram-negative bacterial inner membrane to the outer membrane. Biochim. et Biophys. Acta (BBA)-Molecular Cell. Biology Lipids. 1862, 1461\u20131467 (2017).","journal-title":"Biochim. et Biophys. Acta (BBA)-Molecular Cell. Biology Lipids"},{"key":"80606_CR29","doi-asserted-by":"crossref","unstructured":"Xu, X. et al. The role of a dipeptide transporter in the virulence of human pathogen, Helicobacter pylori. Front. Microbiol. 12 (2021).","DOI":"10.3389\/fmicb.2021.633166"},{"key":"80606_CR30","doi-asserted-by":"publisher","first-page":"253","DOI":"10.1038\/321253a0","volume":"321","author":"MD Manson","year":"1986","unstructured":"Manson, M. D., Blank, V., Brade, G. & Higgins, C. F. Peptide chemotaxis in E. Coli involves the tap signal transducer and the dipeptide permease. Nature 321, 253\u2013256 (1986).","journal-title":"Nature"},{"key":"80606_CR31","doi-asserted-by":"publisher","first-page":"1258","DOI":"10.1128\/jb.116.3.1258-1266.1973","volume":"116","author":"M Rahmanian","year":"1973","unstructured":"Rahmanian, M., Claus, D. R. & Oxender, D. L. Multiplicity of leucine transport systems in Escherichia coli K-12. J. Bacteriol. 116, 1258\u20131266 (1973).","journal-title":"J. Bacteriol."},{"key":"80606_CR32","doi-asserted-by":"publisher","first-page":"6233","DOI":"10.1128\/JB.05473-11","volume":"193","author":"DA Ribardo","year":"2011","unstructured":"Ribardo, D. A. & Hendrixson, D. R. Analysis of the LIV system of Campylobacter jejuni reveals alternative roles for LivJ and LivK in commensalism beyond branched-chain amino acid transport. J. Bacteriol. 193, 6233\u20136243 (2011).","journal-title":"J. Bacteriol."},{"key":"80606_CR33","doi-asserted-by":"publisher","first-page":"204","DOI":"10.1128\/MMBR.62.1.204-229.1998","volume":"62","author":"W Boos","year":"1998","unstructured":"Boos, W. & Shuman, H. Maltose\/maltodextrin system of Escherichia coli: transport, metabolism, and regulation. Microbiol. Mol. Biol. Rev. 62, 204\u2013229 (1998).","journal-title":"Microbiol. Mol. Biol. Rev."},{"key":"80606_CR34","doi-asserted-by":"publisher","first-page":"257","DOI":"10.1038\/314257a0","volume":"314","author":"J Pflugrath","year":"1985","unstructured":"Pflugrath, J. & Quiocho, F. Sulphate sequestered in the sulphate-binding protein of Salmonella typhimurium is bound solely by hydrogen bonds. Nature 314, 257\u2013260 (1985).","journal-title":"Nature"},{"key":"80606_CR35","doi-asserted-by":"publisher","first-page":"121","DOI":"10.1038\/nrmicro1817","volume":"6","author":"HJ Flint","year":"2008","unstructured":"Flint, H. J., Bayer, E. A., Rincon, M. T., Lamed, R. & White, B. A. Polysaccharide utilization by gut bacteria: potential for new insights from genomic analysis. Nat. Rev. Microbiol. 6, 121\u2013131 (2008).","journal-title":"Nat. Rev. Microbiol."},{"key":"80606_CR36","doi-asserted-by":"publisher","first-page":"17615","DOI":"10.1074\/jbc.272.28.17615","volume":"272","author":"JA Hall","year":"1997","unstructured":"Hall, J. A., Ganesan, A. K., Chen, J. & Nikaido, H. Two modes of Ligand binding in maltose-binding protein ofEscherichia coli: FUNCTIONAL SIGNIFICANCE IN ACTIVE TRANSPORT. J. Biol. Chem. 272, 17615\u201317622 (1997).","journal-title":"J. Biol. Chem."},{"key":"80606_CR37","doi-asserted-by":"publisher","first-page":"2061","DOI":"10.1099\/mic.0.28938-0","volume":"152","author":"CK Yost","year":"2006","unstructured":"Yost, C. K., Rath, A. M., Noel, T. C. & Hynes, M. F. Characterization of genes involved in erythritol catabolism in Rhizobium leguminosarum Bv. Viciae. Microbiology 152, 2061\u20132074 (2006).","journal-title":"Microbiology"},{"key":"80606_CR38","doi-asserted-by":"publisher","first-page":"117","DOI":"10.1016\/S0378-1119(97)00574-X","volume":"206","author":"P Br\u00fcnker","year":"1998","unstructured":"Br\u00fcnker, P., Altenbuchner, J. & Mattes, R. Structure and function of the genes involved in mannitol, arabitol and glucitol utilization from Pseudomonas fluorescens DSM50106. Gene 206, 117\u2013126 (1998).","journal-title":"Gene"},{"key":"80606_CR39","doi-asserted-by":"publisher","first-page":"2369","DOI":"10.1128\/JB.185.7.2369-2373.2003","volume":"185","author":"DM De Costa","year":"2003","unstructured":"De Costa, D. M., Suzuki, K. & Yoshida, K. Structural and functional analysis of a putative gene cluster for palatinose transport on the linear chromosome of Agrobacterium tumefaciens MAFF301001. J. Bacteriol. 185, 2369\u20132373 (2003).","journal-title":"J. Bacteriol."},{"key":"80606_CR40","doi-asserted-by":"publisher","first-page":"797","DOI":"10.1099\/mic.0.2007\/013185-0","volume":"154","author":"B Singh","year":"2008","unstructured":"Singh, B. & R\u00f6hm, K. H. Characterization of a Pseudomonas putida ABC transporter (AatJMQP) required for acidic amino acid uptake: biochemical properties and regulation by the Aau two-component system. Microbiology 154, 797\u2013809 (2008).","journal-title":"Microbiology"},{"key":"80606_CR41","doi-asserted-by":"publisher","first-page":"80","DOI":"10.1016\/j.resmic.2003.11.008","volume":"155","author":"MF Hullo","year":"2004","unstructured":"Hullo, M. F., Auger, S., Dassa, E., Danchin, A. & Martin-Verstraete, I. The metNPQ operon of Bacillus subtilis encodes an ABC permease transporting methionine sulfoxide, D-and L-methionine. Res. Microbiol. 155, 80\u201386 (2004).","journal-title":"Res. Microbiol."},{"key":"80606_CR42","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/s12864-015-1736-5","volume":"16","author":"CT Pereira","year":"2015","unstructured":"Pereira, C. T., Moutran, A., Fessel, M. & Balan, A. The sulfur\/sulfonates transport systems in Xanthomonas citri Pv. Citri. BMC Genom. 16, 1\u201311 (2015).","journal-title":"BMC Genom."},{"key":"80606_CR43","doi-asserted-by":"publisher","first-page":"7631","DOI":"10.1128\/jb.179.24.7631-7637.1997","volume":"179","author":"C Kim","year":"1997","unstructured":"Kim, C., Song, S. & Park, C. The D-allose operon of Escherichia coli K-12. J. Bacteriol. 179, 7631\u20137637 (1997).","journal-title":"J. Bacteriol."},{"key":"80606_CR44","doi-asserted-by":"publisher","first-page":"1039","DOI":"10.1128\/JB.181.3.1039-1042.1999","volume":"181","author":"Y Park","year":"1999","unstructured":"Park, Y. & Park, C. Topology of RbsC, a membrane component of the ribose transporter, belonging to the AraH superfamily. J. Bacteriol. 181, 1039\u20131042 (1999).","journal-title":"J. Bacteriol."},{"key":"80606_CR45","doi-asserted-by":"publisher","first-page":"79","DOI":"10.1023\/A:1010797029183","volume":"33","author":"GFL Ames","year":"2001","unstructured":"Ames, G. F. L. et al. Purification and characterization of the membrane-bound complex of an ABC transporter, the histidine permease. J. Bioenerg. Biomembr. 33, 79\u201392 (2001).","journal-title":"J. Bioenerg. Biomembr."},{"key":"80606_CR46","doi-asserted-by":"publisher","first-page":"448","DOI":"10.1016\/j.jmb.2007.10.049","volume":"375","author":"A Vahedi-Faridi","year":"2008","unstructured":"Vahedi-Faridi, A. et al. Crystal structures and mutational analysis of the arginine-, lysine-, histidine-binding protein ArtJ from Geobacillus stearothermophilus. Implications for interactions of ArtJ with its cognate ATP-binding cassette transporter, art (MP) 2. J. Mol. Biol. 375, 448\u2013459 (2008).","journal-title":"J. Mol. Biol."},{"key":"80606_CR47","doi-asserted-by":"publisher","first-page":"16642","DOI":"10.1073\/pnas.262659699","volume":"99","author":"EL Borths","year":"2002","unstructured":"Borths, E. L., Locher, K. P., Lee, A. T. & Rees, D. C. The structure of Escherichia coli BtuF and binding to its cognate ATP binding cassette transporter. Proc. Natl. Acad. Sci. 99, 16642\u201316647 (2002).","journal-title":"Proc. Natl. Acad. Sci."},{"key":"80606_CR48","doi-asserted-by":"publisher","first-page":"640","DOI":"10.1111\/j.1365-2958.2005.04698.x","volume":"57","author":"MK Doeven","year":"2005","unstructured":"Doeven, M. K., Kok, J. & Poolman, B. Specificity and selectivity determinants of peptide transport in Lactococcus lactis and other microorganisms. Mol. Microbiol. 57, 640\u2013649 (2005).","journal-title":"Mol. Microbiol."},{"key":"80606_CR49","doi-asserted-by":"publisher","first-page":"6933","DOI":"10.1016\/S0021-9258(19)45935-8","volume":"246","author":"JH Weiner","year":"1971","unstructured":"Weiner, J. H. & Heppel, L. A. A binding protein for glutamine and its relation to active transport in Escherichia coli. J. Biol. Chem. 246, 6933\u20136941 (1971).","journal-title":"J. Biol. Chem."},{"key":"80606_CR50","doi-asserted-by":"publisher","first-page":"238","DOI":"10.1128\/JB.187.1.238-248.2005","volume":"187","author":"KB Xavier","year":"2005","unstructured":"Xavier, K. B. & Bassler, B. L. Regulation of uptake and processing of the quorum-sensing autoinducer AI-2 in Escherichia coli. J. Bacteriol. 187, 238\u2013248 (2005).","journal-title":"J. Bacteriol."},{"key":"80606_CR51","unstructured":"Boos, W. In Chemotaxis: Its Biology and BiochemistryVol. 1921\u201354 (Karger, 1974)."},{"key":"80606_CR52","doi-asserted-by":"publisher","first-page":"19358","DOI":"10.1016\/S0021-9258(19)36522-6","volume":"268","author":"K Kashiwagi","year":"1993","unstructured":"Kashiwagi, K., Miyamoto, S., Nukui, E., Kobayashi, H. & Igarashi, K. Functions of potA and potD proteins in spermidine-preferential uptake system in Escherichia coli. J. Biol. Chem. 268, 19358\u201319363 (1993).","journal-title":"J. Biol. Chem."},{"key":"80606_CR53","doi-asserted-by":"publisher","first-page":"146","DOI":"10.1016\/S0021-9258(18)54126-0","volume":"268","author":"R Pistocchi","year":"1993","unstructured":"Pistocchi, R. et al. Characteristics of the operon for a putrescine transport system that maps at 19 minutes on the Escherichia coli chromosome. J. Biol. Chem. 268, 146\u2013152 (1993).","journal-title":"J. Biol. Chem."},{"key":"80606_CR54","doi-asserted-by":"publisher","first-page":"225","DOI":"10.1007\/BF00430432","volume":"205","author":"G May","year":"1986","unstructured":"May, G., Faatz, E., Villarejo, M. & Bremer, E. Binding protein dependent transport of glycine betaine and its osmotic regulation in Escherichia coli K12. Mol. Gen. Genet. MGG. 205, 225\u2013233 (1986).","journal-title":"Mol. Gen. Genet. MGG"},{"key":"80606_CR55","doi-asserted-by":"publisher","first-page":"279","DOI":"10.1016\/S0923-2508(01)01199-8","volume":"152","author":"MA Kertesz","year":"2001","unstructured":"Kertesz, M. A. Bacterial transporters for sulfate and organosulfur compounds. Res. Microbiol. 152, 279\u2013290 (2001).","journal-title":"Res. Microbiol."},{"key":"80606_CR56","doi-asserted-by":"publisher","first-page":"8946","DOI":"10.1074\/jbc.273.15.8946","volume":"273","author":"E Webb","year":"1998","unstructured":"Webb, E., Claas, K. & Downs, D. thiBPQ encodes an ABC Transporter Required for Transport of Thiamine and Thiamine Pyrophosphate inSalmonella typhimurium. J. Biol. Chem. 273, 8946\u20138950 (1998).","journal-title":"J. Biol. Chem."},{"key":"80606_CR57","first-page":"117","volume":"3","author":"M Sumiya","year":"1995","unstructured":"Sumiya, M., Davis, E. O., Packman, L. C., McDonald, T. P. & Henderson, P. Molecular genetics of a receptor protein for D-xylose, encoded by the gene xylF, in Escherichia coli. Recept. Channels. 3, 117\u2013128 (1995).","journal-title":"Recept. Channels"},{"key":"80606_CR58","doi-asserted-by":"publisher","first-page":"4125","DOI":"10.1128\/jb.170.9.4125-4135.1988","volume":"170","author":"P Brzoska","year":"1988","unstructured":"Brzoska, P. & Boos, W. Characteristics of a ugp-encoded and phob-dependent glycerophosphoryl diester phosphodiesterase which is physically dependent on the ugp transport system of Escherichia coli. J. Bacteriol. 170, 4125\u20134135 (1988).","journal-title":"J. Bacteriol."},{"key":"80606_CR59","doi-asserted-by":"publisher","first-page":"3874","DOI":"10.1128\/IAI.01957-05","volume":"74","author":"X Yang","year":"2006","unstructured":"Yang, X., Becker, T., Walters, N. & Pascual, D. W. Deletion of znuA virulence factor attenuates Brucella abortus and confers protection against wild-type challenge. Infect. Immun. 74, 3874\u20133879 (2006).","journal-title":"Infect. Immun."},{"key":"80606_CR60","doi-asserted-by":"publisher","first-page":"75","DOI":"10.1006\/jmbi.2000.3961","volume":"301","author":"IT Paulsen","year":"2000","unstructured":"Paulsen, I. T., Nguyen, L., Sliwinski, M. K., Rabus, R. & Saier, M. H. Jr Microbial genome analyses: comparative transport capabilities in eighteen prokaryotes. J. Mol. Biol. 301, 75\u2013100 (2000).","journal-title":"J. Mol. Biol."},{"key":"80606_CR61","doi-asserted-by":"publisher","first-page":"67","DOI":"10.1146\/annurev.cb.08.110192.000435","volume":"8","author":"CF Higgins","year":"1992","unstructured":"Higgins, C. F. ABC transporters: from microorganisms to man. Annu. Rev. Cell Biol. 8, 67\u2013113 (1992).","journal-title":"Annu. Rev. Cell Biol."},{"key":"80606_CR62","doi-asserted-by":"publisher","first-page":"1043","DOI":"10.1038\/nature06419","volume":"450","author":"JP Morth","year":"2007","unstructured":"Morth, J. P. et al. Crystal structure of the sodium\u2013potassium pump. Nature 450, 1043\u20131049 (2007).","journal-title":"Nature"},{"key":"80606_CR63","doi-asserted-by":"publisher","first-page":"71","DOI":"10.1007\/s11274-024-03891-6","volume":"40","author":"M \u00d6zkan","year":"2024","unstructured":"\u00d6zkan, M., Y\u0131lmaz, H., Ergenekon, P., Erdo\u011fan, E. M. & Erbakan, M. Microbial membrane transport proteins and their biotechnological applications. World J. Microbiol. Biotechnol. 40, 71 (2024).","journal-title":"World J. Microbiol. Biotechnol."},{"key":"80606_CR64","doi-asserted-by":"publisher","first-page":"1452240","DOI":"10.3389\/fmicb.2024.1452240","volume":"15","author":"IC Taveira","year":"2024","unstructured":"Taveira, I. C. et al. Structural and biochemical insights of xylose MFS and SWEET transporters in microbial cell factories: challenges to lignocellulosic hydrolysates fermentation. Front. Microbiol. 15, 1452240 (2024).","journal-title":"Front. Microbiol."},{"key":"80606_CR65","doi-asserted-by":"publisher","first-page":"e0161354","DOI":"10.1371\/journal.pone.0161354","volume":"11","author":"M Benedet","year":"2016","unstructured":"Benedet, M. et al. The lack of the essential LptC protein in the trans-envelope lipopolysaccharide transport machine is circumvented by suppressor mutations in LptF, an inner membrane component of the Escherichia coli transporter. PLoS One. 11, e0161354 (2016).","journal-title":"PLoS One"},{"key":"80606_CR66","doi-asserted-by":"publisher","first-page":"1099","DOI":"10.1038\/sj.embor.7400832","volume":"7","author":"A Robson","year":"2006","unstructured":"Robson, A. & Collinson, I. The structure of the Sec complex and the problem of protein translocation. EMBO Rep. 7, 1099\u20131103 (2006).","journal-title":"EMBO Rep."},{"key":"80606_CR67","doi-asserted-by":"publisher","first-page":"29514","DOI":"10.1074\/jbc.271.47.29514","volume":"271","author":"W Wickner","year":"1996","unstructured":"Wickner, W. & Leonard, M. R. Escherichia coli preprotein translocase. J. Biol. Chem. 271, 29514\u201329516 (1996).","journal-title":"J. Biol. Chem."},{"key":"80606_CR68","doi-asserted-by":"publisher","first-page":"75","DOI":"10.3389\/fmicb.2015.00075","volume":"6","author":"S Adachi","year":"2015","unstructured":"Adachi, S., Murakawa, Y. & Hiraga, S. Dynamic nature of SecA and its associated proteins in Escherichia coli. Front. Microbiol. 6, 75 (2015).","journal-title":"Front. Microbiol."},{"key":"80606_CR69","doi-asserted-by":"publisher","first-page":"493","DOI":"10.1128\/JB.181.2.493-500.1999","volume":"181","author":"M Herbort","year":"1999","unstructured":"Herbort, M., Klein, M., Manting, E. H., Driessen, A. J. & Freudl, R. Temporal expression of the Bacillus subtilis secA gene, encoding a central component of the preprotein translocase. J. Bacteriol. 181, 493\u2013500 (1999).","journal-title":"J. Bacteriol."},{"key":"80606_CR70","doi-asserted-by":"publisher","first-page":"23625","DOI":"10.1016\/S0021-9258(17)31561-2","volume":"269","author":"M Hanada","year":"1994","unstructured":"Hanada, M., Nishiyama, K., Mizushima, S. & Tokuda, H. Reconstitution of an efficient protein translocation machinery comprising SecA and the three membrane proteins, SecY, SecE, and SecG (p12). J. Biol. Chem. 269, 23625\u201323631 (1994).","journal-title":"J. Biol. Chem."},{"key":"80606_CR71","doi-asserted-by":"publisher","first-page":"1446","DOI":"10.3389\/fmicb.2016.01446","volume":"7","author":"D Francioli","year":"2016","unstructured":"Francioli, D. et al. Mineral vs. organic amendments: microbial community structure, activity and abundance of agriculturally relevant microbes are driven by long-term fertilization strategies. Front. Microbiol. 7, 1446 (2016).","journal-title":"Front. Microbiol."},{"key":"80606_CR72","doi-asserted-by":"publisher","first-page":"1581","DOI":"10.1093\/molbev\/msq305","volume":"28","author":"J Tong","year":"2011","unstructured":"Tong, J. et al. Ancestral and derived protein import pathways in the mitochondrion of Reclinomonas americana. Mol. Biol. Evol. 28, 1581\u20131591 (2011).","journal-title":"Mol. Biol. Evol."},{"key":"80606_CR73","doi-asserted-by":"publisher","first-page":"3636","DOI":"10.1002\/pmic.200500560","volume":"6","author":"G Zanen","year":"2006","unstructured":"Zanen, G. et al. Proteomic dissection of potential signal recognition particle dependence in protein secretion by Bacillus subtilis. Proteomics 6, 3636\u20133648 (2006).","journal-title":"Proteomics"},{"key":"80606_CR74","doi-asserted-by":"publisher","first-page":"21","DOI":"10.1016\/j.celrep.2011.11.003","volume":"1","author":"D Hizlan","year":"2012","unstructured":"Hizlan, D. et al. Structure of the SecY complex unlocked by a preprotein mimic. Cell. Rep. 1, 21\u201328 (2012).","journal-title":"Cell. Rep."},{"key":"80606_CR75","doi-asserted-by":"publisher","first-page":"e111311","DOI":"10.1371\/journal.pone.0111311","volume":"9","author":"D Pletzer","year":"2014","unstructured":"Pletzer, D. et al. High-throughput screening of dipeptide utilization mediated by the ABC transporter DppBCDF and its substrate-binding proteins DppA1-A5 in Pseudomonas aeruginosa. PloS One. 9, e111311 (2014).","journal-title":"PloS One"},{"key":"80606_CR76","doi-asserted-by":"publisher","first-page":"535","DOI":"10.3390\/genes12040535","volume":"12","author":"MC Enebe","year":"2021","unstructured":"Enebe, M. C. & Babalola, O. O. Metagenomics Assessment of Soil Fertilization on the Chemotaxis and Disease suppressive genes abundance in the Maize Rhizosphere. Genes 12, 535 (2021).","journal-title":"Genes"},{"key":"80606_CR77","doi-asserted-by":"publisher","first-page":"173","DOI":"10.1111\/j.1365-2958.1991.tb01838.x","volume":"5","author":"M Perego","year":"1991","unstructured":"Perego, M., Higgins, C., Pearce, S., Gallagher, M. & Hoch, J. The oligopeptide transport system of Bacillus subtilis plays a role in the initiation of sporulation. Mol. Microbiol. 5, 173\u2013185 (1991).","journal-title":"Mol. Microbiol."},{"key":"80606_CR78","doi-asserted-by":"publisher","first-page":"573","DOI":"10.1006\/jmbi.1998.1609","volume":"277","author":"IT Paulsen","year":"1998","unstructured":"Paulsen, I. T., Sliwinski, M. K. & Saier, M. H. Jr Microbial genome analyses: global comparisons of transport capabilities based on phylogenies, bioenergetics and substrate specificities. J. Mol. Biol. 277, 573\u2013592 (1998).","journal-title":"J. Mol. Biol."},{"key":"80606_CR79","doi-asserted-by":"publisher","first-page":"386","DOI":"10.1186\/1471-2105-9-386","volume":"9","author":"F Meyer","year":"2008","unstructured":"Meyer, F. et al. The metagenomics RAST server\u2013a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinform. 9, 386 (2008).","journal-title":"BMC Bioinform."},{"key":"80606_CR80","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/1471-2105-11-485","volume":"11","author":"MP Cox","year":"2010","unstructured":"Cox, M. P., Peterson, D. A., Biggs, P. J. & SolexaQA At-a-glance quality assessment of Illumina second-generation sequencing data. BMC Bioinform. 11, 1\u20136 (2010).","journal-title":"BMC Bioinform."},{"key":"80606_CR81","first-page":"656","volume":"12","author":"WJ Kent","year":"2002","unstructured":"Kent, W. J. BLAT\u2014the BLAST-like alignment tool. Genome Res. 12, 656\u2013664 (2002).","journal-title":"Genome Res."},{"key":"80606_CR82","first-page":"9","volume":"4","author":"\u00d8 Hammer","year":"2001","unstructured":"Hammer, \u00d8., Harper, D. A. & Ryan, P. D. PAST: paleontological statistics software package for education and data analysis. Palaeontologia Electronica. 4, 9 (2001).","journal-title":"Palaeontologia Electronica"}],"container-title":["Scientific Reports"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.nature.com\/articles\/s41598-024-80606-9","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/www.nature.com\/articles\/s41598-024-80606-9.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/www.nature.com\/articles\/s41598-024-80606-9.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,3,2]],"date-time":"2026-03-02T14:01:00Z","timestamp":1772460060000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.nature.com\/articles\/s41598-024-80606-9"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,2,9]]},"references-count":82,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2026,12]]}},"alternative-id":["80606"],"URL":"https:\/\/doi.org\/10.1038\/s41598-024-80606-9","relation":{},"ISSN":["2045-2322"],"issn-type":[{"value":"2045-2322","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,2,9]]},"assertion":[{"value":"5 June 2024","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"19 November 2024","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"9 February 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors declare no competing interests.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}}],"article-number":"7871"}}