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The inhibition by insulin is experimentally known, but the role of Zn<jats:sup>2+<\/jats:sup> is controversial as both correlations and anti-correlations at the population level are observed between T2D risk and the activity of a \u03b2-cell specific zinc ion transporter, ZnT8. Since Zn<jats:sup>2+<\/jats:sup> concentration determines insulin oligomer equilibrium, we computationally investigated interactions of IAPP with different insulin oligomers and compared with IAPP homodimer formation. We found that IAPP binding with insulin oligomers competes with the formation of both higher-molecular-weight insulin oligomers and IAPP homodimers. Therefore, zinc deficiency due to loss-of-function ZnT8 mutations shifts insulin oligomer equilibrium toward zinc-free monomers and dimers, which bind IAPP monomers more efficiently compared to zinc-bound hexamers. 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