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Longidorus, Paralongidorus<\/jats:italic>, and <jats:italic>Xiphinema<\/jats:italic>) are highly polyphagous plant-parasitic nematodes in wild and cultivated plants and some of them are plant-virus vectors (nepovirus). The mitochondrial (mt) genomes of the dagger and needle nematodes, <jats:italic>Xiphinema rivesi, Xiphinema pachtaicum, Longidorus vineacola<\/jats:italic> and <jats:italic>Paralongidorus litoralis<\/jats:italic> were sequenced in this study. The four circular mt genomes have an estimated size of 12.6, 12.5, 13.5 and 12.7\u2009kb, respectively. Up to date, the mt genome of <jats:italic>X. pachtaicum<\/jats:italic> is the smallest genome found in Nematoda. The four mt genomes contain 12 protein-coding genes (<jats:italic>viz. cox1-3, nad1-6, nad4L, atp6<\/jats:italic> and <jats:italic>cob<\/jats:italic>) and two ribosomal RNA genes (<jats:italic>rrnL<\/jats:italic> and <jats:italic>rrnS<\/jats:italic>), but the <jats:italic>atp8<\/jats:italic> gene was not detected. These mt genomes showed a gene arrangement very different within the Longidoridae species sequenced, with the exception of very closely related species (<jats:italic>X. americanum<\/jats:italic> and <jats:italic>X. rivesi<\/jats:italic>). The sizes of non-coding regions in the Longidoridae nematodes were very small and were present in a few places in the mt genome. Phylogenetic analysis of all coding genes showed a closer relationship between <jats:italic>Longidorus<\/jats:italic> and <jats:italic>Paralongidorus<\/jats:italic> and different phylogenetic possibilities for the three <jats:italic>Xiphinema<\/jats:italic> species.<\/jats:p>","DOI":"10.1038\/srep41813","type":"journal-article","created":{"date-parts":[[2017,2,2]],"date-time":"2017-02-02T11:08:41Z","timestamp":1486033721000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":28,"title":["Mitochondrial genome diversity in dagger and needle nematodes (Nematoda: Longidoridae)"],"prefix":"10.1038","volume":"7","author":[{"given":"J. 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