{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,17]],"date-time":"2026-09-17T13:34:11Z","timestamp":1789652051127,"version":"4.0.0"},"reference-count":113,"publisher":"Informa UK Limited","issue":"21","content-domain":{"domain":["www.tandfonline.com"],"crossmark-restriction":true},"short-container-title":["Journal of Biomolecular Structure and Dynamics"],"published-print":{"date-parts":[[2022,12,5]]},"DOI":"10.1080\/07391102.2021.1947381","type":"journal-article","created":{"date-parts":[[2021,7,12]],"date-time":"2021-07-12T01:55:55Z","timestamp":1626054955000},"page":"10696-10714","update-policy":"https:\/\/doi.org\/10.1080\/tandf_crossmark_01","source":"Crossref","is-referenced-by-count":10,"title":["<i>In silico<\/i>design of epitope-based peptide vaccine against non-typhoidal<i>Salmonella<\/i>through immunoinformatic approaches"],"prefix":"10.1080","volume":"40","author":[{"given":"Md. Chayan","family":"Ali","sequence":"first","affiliation":[{"name":"Department of Biotechnology & Genetic Engineering, Faculty of Biological Sciences, Islamic University, Kushtia, Bangladesh"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Mst. Shanzeda","family":"Khatun","sequence":"additional","affiliation":[{"name":"Department of Biotechnology & Genetic Engineering, Faculty of Biological Sciences, Islamic University, Kushtia, Bangladesh"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sultana Israt","family":"Jahan","sequence":"additional","affiliation":[{"name":"Department of Biotechnology & Genetic Engineering, Noakhali Science and Technology University, Noakhali, Bangladesh"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Raju","family":"Das","sequence":"additional","affiliation":[{"name":"Department of Physiology, Dongguk University College of Medicine, Gyeongju, Republic of Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yeasmin Akter","family":"Munni","sequence":"additional","affiliation":[{"name":"Department of Anatomy, Dongguk University College of Medicine, Gyeongju, Republic of Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Md Mafizur","family":"Rahman","sequence":"additional","affiliation":[{"name":"Department of Biotechnology & Genetic Engineering, Faculty of Biological Sciences, Islamic University, Kushtia, Bangladesh"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4128-5308","authenticated-orcid":false,"given":"Raju","family":"Dash","sequence":"additional","affiliation":[{"name":"Department of Anatomy, Dongguk University College of Medicine, Gyeongju, Republic of Korea"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"301","published-online":{"date-parts":[[2021,7,11]]},"reference":[{"key":"CIT0001","doi-asserted-by":"publisher","DOI":"10.1155\/2018\/6718083"},{"key":"CIT0002","doi-asserted-by":"publisher","DOI":"10.1002\/prot.20530"},{"key":"CIT0003","doi-asserted-by":"publisher","DOI":"10.1155\/2015\/520179"},{"key":"CIT0004","doi-asserted-by":"publisher","DOI":"10.3201\/eid2106.140999"},{"key":"CIT0005","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0176990"},{"key":"CIT0006","doi-asserted-by":"publisher","DOI":"10.1111\/ahg.12350"},{"key":"CIT0007","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkw336"},{"key":"CIT0008","unstructured":"Biovia, D. S. (2015).Discovery studio visualizer v4.5. Release."},{"key":"CIT0009","doi-asserted-by":"publisher","DOI":"10.1086\/505973"},{"key":"CIT0010","doi-asserted-by":"publisher","DOI":"10.1016\/S0959-440X(99)80064-5"},{"key":"CIT0011","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-7-153"},{"key":"CIT0012","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-8-361"},{"key":"CIT0013","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1003266"},{"issue":"2","key":"CIT0014","first-page":"78","volume":"21","author":"Cellucci T.","year":"2010","journal-title":"The Canadian Journal of Infectious Diseases & Medical Microbiology\/Journal Canadien Des Maladies Infectieuses et de la Microbiologie Medicale"},{"key":"CIT0015","doi-asserted-by":"publisher","DOI":"10.6026\/97320630005155"},{"key":"CIT0016","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gki396"},{"key":"CIT0017","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMoa012261"},{"key":"CIT0018","doi-asserted-by":"publisher","DOI":"10.3201\/eid1009.030596"},{"key":"CIT0019","doi-asserted-by":"publisher","DOI":"10.1016\/j.molliq.2019.04.144"},{"key":"CIT0020","doi-asserted-by":"publisher","DOI":"10.1002\/pro.5560020916"},{"key":"CIT0021","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gku989"},{"key":"CIT0022","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.01333-10"},{"key":"CIT0023","doi-asserted-by":"publisher","DOI":"10.3390\/ijms20246256"},{"key":"CIT0024","doi-asserted-by":"publisher","DOI":"10.2174\/1381612825666190527095510"},{"key":"CIT0025","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-020-60561-x"},{"key":"CIT0026","doi-asserted-by":"crossref","first-page":"11","DOI":"10.2147\/AABC.S115859","volume":"10","author":"Dash R.","year":"2017","journal-title":"Advances and Applications in Bioinformatics and Chemistry: AABC"},{"key":"CIT0027","doi-asserted-by":"publisher","DOI":"10.1007\/s12539-015-0121-z"},{"key":"CIT0028","doi-asserted-by":"publisher","DOI":"10.1007\/s00894-019-3979-6"},{"key":"CIT0029","doi-asserted-by":"publisher","DOI":"10.1007\/s40203-018-0038-4"},{"issue":"6","key":"CIT0030","first-page":"596","volume":"21","author":"Dempsey L. A.","year":"2020","journal-title":"Nature Immunology"},{"key":"CIT0031","doi-asserted-by":"publisher","DOI":"10.1021\/ct4010307"},{"key":"CIT0032","doi-asserted-by":"publisher","DOI":"10.1007\/s00894-014-2278-5"},{"key":"CIT0033","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-8-4"},{"key":"CIT0034","doi-asserted-by":"publisher","DOI":"10.1186\/s12917-019-1867-z"},{"key":"CIT0035","doi-asserted-by":"publisher","DOI":"10.1002\/jmr.893"},{"key":"CIT0036","doi-asserted-by":"publisher","DOI":"10.1080\/21553769.2015.1051243"},{"key":"CIT0037","doi-asserted-by":"publisher","DOI":"10.1016\/S0264-410X(02)00407-3"},{"issue":"1","key":"CIT0038","doi-asserted-by":"crossref","first-page":"124.13","DOI":"10.4049\/jimmunol.202.Supp.124.13","volume":"202","author":"Fang D.","year":"2019","journal-title":"The Journal of Immunology"},{"key":"CIT0039","doi-asserted-by":"publisher","DOI":"10.3389\/fimmu.2017.00278"},{"key":"CIT0040","doi-asserted-by":"publisher","DOI":"10.1155\/2018\/3502514"},{"key":"CIT0041","doi-asserted-by":"publisher","DOI":"10.1016\/j.biotechadv.2017.05.003"},{"key":"CIT0042","doi-asserted-by":"publisher","DOI":"10.3389\/fcimb.2018.00172"},{"key":"CIT0043","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0073957"},{"key":"CIT0044","doi-asserted-by":"crossref","unstructured":"Haeusler, G. M. & Curtis, N. (2013).Non-typhoidal Salmonella in children: Microbiology, epidemiology and treatment, in Hot Topics in Infection and Immunity in Children IX(pp. 13\u201326). Springer.","DOI":"10.1007\/978-1-4614-4726-9_2"},{"key":"CIT0045","doi-asserted-by":"publisher","DOI":"10.3201\/eid1106.041017"},{"key":"CIT0046","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiolchem.2019.02.003"},{"key":"CIT0047","doi-asserted-by":"publisher","DOI":"10.2174\/1381612824666181106111020"},{"key":"CIT0048","doi-asserted-by":"publisher","DOI":"10.1021\/ci100275a"},{"key":"CIT0049","doi-asserted-by":"publisher","DOI":"10.3389\/fimmu.2014.00481"},{"key":"CIT0050","doi-asserted-by":"publisher","DOI":"10.3390\/ijms22010129"},{"key":"CIT0051","doi-asserted-by":"publisher","DOI":"10.1016\/S0022-2836(02)00470-9"},{"key":"CIT0052","doi-asserted-by":"publisher","DOI":"10.1002\/prot.10613"},{"key":"CIT0053","doi-asserted-by":"publisher","DOI":"10.1016\/j.micpath.2017.02.028"},{"key":"CIT0054","doi-asserted-by":"publisher","DOI":"10.14202\/vetworld.2019.504-521"},{"key":"CIT0055","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkx346"},{"key":"CIT0056","doi-asserted-by":"publisher","DOI":"10.1016\/B978-0-12-802302-0.00005-4"},{"key":"CIT0057","doi-asserted-by":"publisher","DOI":"10.3201\/eid1311.061138"},{"key":"CIT0058","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijid.2019.01.028"},{"key":"CIT0059","doi-asserted-by":"publisher","DOI":"10.2174\/092986607781483859"},{"key":"CIT0060","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gks438"},{"key":"CIT0061","doi-asserted-by":"publisher","DOI":"10.1046\/j.1365-2958.2000.01983.x"},{"key":"CIT0062","doi-asserted-by":"publisher","DOI":"10.1517\/14622416.5.4.405"},{"key":"CIT0063","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.23899"},{"key":"CIT0064","doi-asserted-by":"publisher","DOI":"10.1016\/j.jmgm.2006.02.009"},{"key":"CIT0065","doi-asserted-by":"crossref","unstructured":"Land, H. & Humble, M. S. (2018).YASARA: A tool to obtain structural guidance in biocatalytic investigations, in Protein Engineering(pp. 43\u201367). Springer.","DOI":"10.1007\/978-1-4939-7366-8_4"},{"key":"CIT0066","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-8-424"},{"key":"CIT0067","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/29.1.221"},{"key":"CIT0068","doi-asserted-by":"publisher","DOI":"10.1007\/BF00228148"},{"key":"CIT0069","doi-asserted-by":"publisher","DOI":"10.1093\/jn\/130.12.2922"},{"key":"CIT0070","doi-asserted-by":"publisher","DOI":"10.1016\/S1286-4579(02)01545-9"},{"key":"CIT0071","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.00428-16"},{"key":"CIT0072","doi-asserted-by":"publisher","DOI":"10.1086\/650733"},{"key":"CIT0073","doi-asserted-by":"publisher","DOI":"10.5772\/intechopen.69273"},{"key":"CIT0074","doi-asserted-by":"publisher","DOI":"10.2105\/AJPH.94.6.985"},{"key":"CIT0075","doi-asserted-by":"publisher","DOI":"10.1016\/j.jmgm.2018.04.014"},{"key":"CIT0076","doi-asserted-by":"publisher","DOI":"10.1155\/2015\/483150"},{"key":"CIT0077","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiolchem.2020.107414"},{"key":"CIT0078","doi-asserted-by":"publisher","DOI":"10.1080\/07391102.2019.1692072"},{"key":"CIT0079","doi-asserted-by":"publisher","DOI":"10.1016\/j.molimm.2020.02.009"},{"key":"CIT0080","doi-asserted-by":"publisher","DOI":"10.3390\/foods7100167"},{"key":"CIT0081","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-8-238"},{"key":"CIT0082","doi-asserted-by":"publisher","DOI":"10.1007\/s40203-020-00062-x"},{"key":"CIT0083","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4939-3389-1_34"},{"key":"CIT0084","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-6-132"},{"key":"CIT0085","doi-asserted-by":"publisher","DOI":"10.4049\/jimmunol.171.4.1741"},{"key":"CIT0086","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.20084"},{"key":"CIT0087","doi-asserted-by":"publisher","DOI":"10.1080\/21645515.2020.1785791"},{"key":"CIT0088","doi-asserted-by":"publisher","DOI":"10.1006\/jmbi.1996.0628"},{"key":"CIT0089","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0009862"},{"key":"CIT0090","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiolchem.2016.10.004"},{"key":"CIT0091","doi-asserted-by":"publisher","DOI":"10.1038\/s41419-020-02862-7"},{"key":"CIT0092","doi-asserted-by":"publisher","DOI":"10.1002\/prot.21078"},{"key":"CIT0093","doi-asserted-by":"publisher","DOI":"10.1155\/2017\/2680160"},{"key":"CIT0094","doi-asserted-by":"publisher","DOI":"10.1007\/s10822-013-9644-8"},{"key":"CIT0095","doi-asserted-by":"publisher","DOI":"10.3201\/eid1701.P11101"},{"key":"CIT0096","volume-title":"Release 2018 version 1: Maestro","author":"Schr\u00f6dinger Release","year":"2018"},{"key":"CIT0097","doi-asserted-by":"publisher","DOI":"10.1186\/s13062-015-0103-4"},{"key":"CIT0098","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.02265-15"},{"key":"CIT0099","doi-asserted-by":"publisher","DOI":"10.1007\/s00251-010-0441-4"},{"key":"CIT0100","doi-asserted-by":"publisher","DOI":"10.1016\/S0006-3495(04)74084-9"},{"key":"CIT0101","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0244176"},{"key":"CIT0102","doi-asserted-by":"publisher","DOI":"10.1186\/s40249-020-00752-w"},{"key":"CIT0103","doi-asserted-by":"publisher","DOI":"10.1007\/s00018-005-4528-2"},{"issue":"2","key":"CIT0104","doi-asserted-by":"crossref","first-page":"455","DOI":"10.1002\/jcc.21334","volume":"31","author":"Trott O.","year":"2010","journal-title":"Journal of Computational Chemistry"},{"key":"CIT0105","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2958.2005.04825.x"},{"key":"CIT0106","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0005118"},{"key":"CIT0107","doi-asserted-by":"publisher","DOI":"10.1086\/427263"},{"key":"CIT0108","doi-asserted-by":"publisher","DOI":"10.1016\/j.vaccine.2018.05.106"},{"key":"CIT0109","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkz397"},{"key":"CIT0110","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkm290"},{"key":"CIT0111","first-page":"531","volume":"112","author":"Wilkins M. R.","year":"1999","journal-title":"Methods in Molecular Biology (Clifton, N.J.)"},{"key":"CIT0112","doi-asserted-by":"publisher","DOI":"10.1016\/j.bpj.2011.10.024"},{"key":"CIT0113","doi-asserted-by":"publisher","DOI":"10.1016\/j.str.2016.07.021"}],"container-title":["Journal of Biomolecular Structure and Dynamics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.tandfonline.com\/doi\/pdf\/10.1080\/07391102.2021.1947381","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,11,5]],"date-time":"2023-11-05T22:30:28Z","timestamp":1699223428000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/07391102.2021.1947381"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2021,7,11]]},"references-count":113,"journal-issue":{"issue":"21","published-print":{"date-parts":[[2022,12,5]]}},"alternative-id":["10.1080\/07391102.2021.1947381"],"URL":"https:\/\/doi.org\/10.1080\/07391102.2021.1947381","relation":{},"ISSN":["0739-1102","1538-0254"],"issn-type":[{"value":"0739-1102","type":"print"},{"value":"1538-0254","type":"electronic"}],"subject":[],"published":{"date-parts":[[2021,7,11]]},"assertion":[{"value":"The publishing and review policy for this title is described in its Aims & Scope.","order":1,"name":"peerreview_statement","label":"Peer Review Statement"},{"value":"http:\/\/www.tandfonline.com\/action\/journalInformation?show=aimsScope&journalCode=tbsd20","URL":"http:\/\/www.tandfonline.com\/action\/journalInformation?show=aimsScope&journalCode=tbsd20","order":2,"name":"aims_and_scope_url","label":"Aim & Scope"},{"value":"2021-03-05","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2021-06-20","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2021-07-11","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}