{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,14]],"date-time":"2025-02-14T05:13:57Z","timestamp":1739510037866,"version":"3.37.0"},"reference-count":100,"publisher":"Informa UK Limited","issue":"1","content-domain":{"domain":["www.tandfonline.com"],"crossmark-restriction":true},"short-container-title":["Journal of Biomolecular Structure and Dynamics"],"published-print":{"date-parts":[[2025,1,2]]},"DOI":"10.1080\/07391102.2023.2279285","type":"journal-article","created":{"date-parts":[[2023,11,10]],"date-time":"2023-11-10T17:42:56Z","timestamp":1699638176000},"page":"20-35","update-policy":"https:\/\/doi.org\/10.1080\/tandf_crossmark_01","source":"Crossref","is-referenced-by-count":0,"title":["Epitopes mapping for identification of potential cross-reactive peptide against leptospirosis"],"prefix":"10.1080","volume":"43","author":[{"given":"Vibhisha","family":"Vaghasia","sequence":"first","affiliation":[{"name":"Department of Botany, Bioinformatics and Climate Change Impacts management, Gujarat University","place":["Ahmedabad, India"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kumari Snehkant","family":"Lata","sequence":"additional","affiliation":[{"name":"Department of Botany, Bioinformatics and Climate Change Impacts management, Gujarat University","place":["Ahmedabad, India"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Saumya","family":"Patel","sequence":"additional","affiliation":[{"name":"Department of Botany, Bioinformatics and Climate Change Impacts management, Gujarat University","place":["Ahmedabad, India"]}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jayashankar","family":"Das","sequence":"additional","affiliation":[{"name":"Valnizen Healthcare","place":["Mumbai, India"]}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"301","published-online":{"date-parts":[[2023,11,10]]},"reference":[{"key":"e_1_3_4_2_1","first-page":"251","article-title":"Vaccines against leptospirosis","author":"Adler B.","year":"2014","unstructured":"Adler, B. (2014). Vaccines against leptospirosis. Leptospira and Leptospirosis, 251\u2013272.","journal-title":"Leptospira and Leptospirosis,"},{"key":"e_1_3_4_3_1","doi-asserted-by":"publisher","DOI":"10.1093\/database\/bay057"},{"key":"e_1_3_4_4_1","unstructured":"Bharti J. Nally J. Ricaldi M. M.-T L. (2003). Leptospirosis: a zoonotic disease of global importance. Thelancet.com. https:\/\/www.thelancet.com\/journals\/laninf\/article\/PIIS1473-3099(03)00830-2\/fulltext?version%3DprinterFriendly"},{"key":"e_1_3_4_5_1","doi-asserted-by":"publisher","DOI":"10.1002\/tre.619"},{"key":"e_1_3_4_6_1","doi-asserted-by":"publisher","DOI":"10.1016\/s0264-410x(03)00439-0"},{"key":"e_1_3_4_7_1","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-immunol-032712-100019"},{"key":"e_1_3_4_8_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0005441"},{"key":"e_1_3_4_9_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0003898"},{"key":"e_1_3_4_10_1","unstructured":"Darden T. York D. & Pedersen L. (2023). Particle mesh Ewald: An W log(N) method for Ewald sums in large systems. http:\/\/jcp.aip.org\/jcp\/copyright.jsp"},{"key":"e_1_3_4_11_1","doi-asserted-by":"publisher","DOI":"10.2217\/fvl-2021-0171"},{"key":"e_1_3_4_12_1","doi-asserted-by":"publisher","DOI":"10.2174\/1570180818666210901125519"},{"key":"e_1_3_4_13_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.meegid.2020.104633"},{"key":"e_1_3_4_14_1","doi-asserted-by":"publisher","DOI":"10.3390\/antib10020014"},{"key":"e_1_3_4_15_1","doi-asserted-by":"publisher","DOI":"10.1080\/07391102.2021.1918252"},{"key":"e_1_3_4_16_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1751-7915.2011.00276.x"},{"key":"e_1_3_4_17_1","doi-asserted-by":"publisher","DOI":"10.1586\/14760584.3.1.59"},{"issue":"1","key":"e_1_3_4_18_1","first-page":"82","article-title":"Pymol: An open-source molecular graphics tool","volume":"40","author":"DeLano W. L.","year":"2002","unstructured":"DeLano, W. L. (2002). Pymol: An open-source molecular graphics tool. CCP4 Newsl. Protein Crystallogr, 40(1), 82\u201392.","journal-title":"CCP4 Newsl. Protein Crystallogr"},{"key":"e_1_3_4_19_1","doi-asserted-by":"publisher","DOI":"10.3390\/ijms18010158"},{"key":"e_1_3_4_20_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btt619"},{"key":"e_1_3_4_21_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-8-4"},{"key":"e_1_3_4_22_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-662-45059-8_6"},{"key":"e_1_3_4_23_1","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.55.3.836-839.1985"},{"key":"e_1_3_4_24_1","doi-asserted-by":"crossref","unstructured":"Faezi S. Bahrmand A. Sardari S. Nikokar I. & K.-G K. (2023). Reports and undefined 2019 \u201cEpitope-based immunoinformatics study of a novel PilQ380\u2013706-PilA fusion protein from Pseudomonas aeruginosa \u201d. Elsevier. https:\/\/www.sciencedirect.com\/science\/article\/pii\/S2452014419300275","DOI":"10.1016\/j.genrep.2019.100385"},{"key":"e_1_3_4_25_1","volume-title":"Leptospira and leptospirosis","author":"Faine S.","year":"1994","unstructured":"Faine, S. (1994). Leptospira and leptospirosis. CRC Press Inc."},{"key":"e_1_3_4_26_1","doi-asserted-by":"publisher","DOI":"10.1590\/s0074-02762004000900011"},{"key":"e_1_3_4_27_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-3083.2010.02505.x"},{"key":"e_1_3_4_28_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.vaccine.2016.03.110"},{"key":"e_1_3_4_29_1","doi-asserted-by":"publisher","DOI":"10.3389\/fimmu.2017.00256"},{"key":"e_1_3_4_30_1","first-page":"65","article-title":"Leptospirosis in humans","author":"Haake D. A.","year":"2014","unstructured":"Haake, D. A., & Levett, P. N. (2014). Leptospirosis in humans. Leptospira and Leptospirosis, 65\u201397.","journal-title":"Leptospira and Leptospirosis,"},{"key":"e_1_3_4_31_1","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.67.12.6572-6582.1999"},{"key":"e_1_3_4_32_1","doi-asserted-by":"publisher","DOI":"10.1042\/BA20000034"},{"key":"e_1_3_4_33_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.molimm.2014.12.013"},{"key":"e_1_3_4_34_1","doi-asserted-by":"publisher","DOI":"10.1038\/srep12501"},{"key":"e_1_3_4_35_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkt458"},{"key":"e_1_3_4_36_1","doi-asserted-by":"publisher","DOI":"10.1093\/jnci\/94.23.1780"},{"key":"e_1_3_4_37_1","doi-asserted-by":"publisher","DOI":"10.1007\/s10989-018-09805-z"},{"key":"e_1_3_4_38_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00251-013-0720-y"},{"key":"e_1_3_4_39_1","doi-asserted-by":"publisher","DOI":"10.1007\/BF01195768"},{"key":"e_1_3_4_40_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-017-08842-w"},{"issue":"3","key":"e_1_3_4_41_1","first-page":"210","article-title":"Leptospirosis vaccines: Past, present, and future","volume":"51","author":"Koizumi N.","year":"2005","unstructured":"Koizumi, N., & Watanabe, H. (2005). Leptospirosis vaccines: Past, present, and future. Journal of Postgraduate Medicine 51(3), 210.","journal-title":"Journal of Postgraduate Medicine"},{"key":"e_1_3_4_42_1","doi-asserted-by":"publisher","DOI":"10.1016\/0014-5793(90)80535-q"},{"key":"e_1_3_4_43_1","doi-asserted-by":"publisher","DOI":"10.1021\/AR000033J"},{"key":"e_1_3_4_44_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-018-38329-1"},{"key":"e_1_3_4_45_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkw329"},{"key":"e_1_3_4_46_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-8-424"},{"key":"e_1_3_4_47_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-018-25281-3"},{"key":"e_1_3_4_48_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.micpath.2021.105347"},{"key":"e_1_3_4_49_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.meegid.2020.104579"},{"key":"e_1_3_4_50_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-0716-0389-5_7"},{"key":"e_1_3_4_51_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.immuni.2005.05.009"},{"key":"e_1_3_4_52_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-662-45059-8_2"},{"key":"e_1_3_4_53_1","doi-asserted-by":"publisher","DOI":"10.1016\/s1286-4579(02)01545-9"},{"key":"e_1_3_4_54_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2180-11-21"},{"key":"e_1_3_4_55_1","doi-asserted-by":"publisher","DOI":"10.3390\/pathogens12030376"},{"key":"e_1_3_4_56_1","doi-asserted-by":"publisher","DOI":"10.1023\/A:1008763014207"},{"key":"e_1_3_4_57_1","unstructured":"Mehla K. & Ramana J. (2023). BioSystems and undefined 2016 \u201cIdentification of epitope-based peptide vaccine candidates against enterotoxigenic Escherichia coli: A comparative genomics and immunoinformatics\u201d. Pubs.rsc.orgK Mehla J RamanaMolecular BioSystems 2016\u2022Pubs.rsc.org. https:\/\/pubs.rsc.org\/en\/content\/articlehtml\/2016\/mb\/c5mb00745c?casa_token=YFKX9xwjj4sAAAAA:lIZ5PY75-cqcA_E6cYcKuEO__CIr1LKIwFM0b-V6b-bmv0zNcbuQwkKddOnGf8szXZNJgQBW6IBPT0w"},{"key":"e_1_3_4_58_1","doi-asserted-by":"publisher","DOI":"10.1038\/srep37313"},{"key":"e_1_3_4_59_1","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.21256"},{"key":"e_1_3_4_60_1","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.70.11.6147-6157.2002"},{"key":"e_1_3_4_61_1","doi-asserted-by":"publisher","DOI":"10.4049\/jimmunol.168.5.2371"},{"key":"e_1_3_4_62_1","doi-asserted-by":"publisher","DOI":"10.1007\/S11274-021-03188-Y"},{"key":"e_1_3_4_63_1","doi-asserted-by":"publisher","DOI":"10.1111\/J.1365-2567.2010.03268.X"},{"key":"e_1_3_4_64_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.447334"},{"key":"e_1_3_4_65_1","doi-asserted-by":"publisher","DOI":"10.4161\/hv.7.11.17944"},{"key":"e_1_3_4_66_1","unstructured":"Open Source Drug Discovery Consortium. (2023). In Silico\u2026 - Google Scholar. https:\/\/scholar.google.com\/scholar?hl=en&as_sdt=0%2C5&q=Open+Source+Drug+Discovery+Consortium.+In+Silico+Approach+for+ Predicting+Toxicity+of+Peptides+and+Proteins.&btnG="},{"key":"e_1_3_4_67_1","doi-asserted-by":"publisher","DOI":"10.1021\/bi00367a013"},{"key":"e_1_3_4_68_1","doi-asserted-by":"publisher","DOI":"10.4049\/jimmunol.172.11.6783"},{"key":"e_1_3_4_69_1","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.20084"},{"key":"e_1_3_4_70_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-9-514"},{"key":"e_1_3_4_71_1","doi-asserted-by":"publisher","DOI":"10.1016\/s1369-5274(00)00119-3"},{"key":"e_1_3_4_72_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pntd.0000228"},{"key":"e_1_3_4_73_1","doi-asserted-by":"publisher","DOI":"10.4049\/jimmunol.156.10.3882"},{"key":"e_1_3_4_74_1","doi-asserted-by":"publisher","DOI":"10.1038\/nbt1179"},{"key":"e_1_3_4_75_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0016921"},{"key":"e_1_3_4_76_1","doi-asserted-by":"publisher","DOI":"10.1139\/w06-138"},{"key":"e_1_3_4_77_1","doi-asserted-by":"publisher","DOI":"10.1126\/science.1082305"},{"key":"e_1_3_4_78_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0144475"},{"key":"e_1_3_4_79_1","doi-asserted-by":"publisher","DOI":"10.1021\/ct900587b"},{"key":"e_1_3_4_80_1","doi-asserted-by":"publisher","DOI":"10.1128\/CVI.00468-09"},{"key":"e_1_3_4_81_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.actatropica.2019.105183"},{"key":"e_1_3_4_82_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jbi.2014.11.003"},{"key":"e_1_3_4_83_1","doi-asserted-by":"publisher","DOI":"10.1186\/1743-422X-7-351"},{"key":"e_1_3_4_84_1","doi-asserted-by":"publisher","DOI":"10.1080\/01490451.2021.1992042"},{"key":"e_1_3_4_85_1","doi-asserted-by":"publisher","DOI":"10.1016\/0263-7855(83)80001-0"},{"key":"e_1_3_4_86_1","doi-asserted-by":"publisher","DOI":"10.2217\/FVL.12.108"},{"key":"e_1_3_4_87_1","doi-asserted-by":"publisher","DOI":"10.1002\/j.1460-2075.1986.tb04226.x"},{"key":"e_1_3_4_88_1","doi-asserted-by":"publisher","DOI":"10.5829\/idosi.ijmr.2013.4.1.7134"},{"journal-title":"Molecular-Dynamics Study of Atomic Motions in Water","author":"Toukan K.","key":"e_1_3_4_89_1","unstructured":"Toukan, K., & Rahman, A. Molecular-Dynamics Study of Atomic Motions in Water."},{"key":"e_1_3_4_90_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.463137"},{"key":"e_1_3_4_91_1","doi-asserted-by":"publisher","DOI":"10.1007\/s13721-023-00411-8"},{"key":"e_1_3_4_92_1","doi-asserted-by":"publisher","DOI":"10.1128\/CVI.05524-11"},{"key":"e_1_3_4_93_1","first-page":"95","article-title":"Design, and undefined 2006, \u201cRecent advances in free energy calculations with a combination of molecular mechanics and continuum models\u201d","volume":"2","author":"Wang J.","year":"2023","unstructured":"Wang, J., & Hou, T. (2023). Design, and undefined 2006, \u201cRecent advances in free energy calculations with a combination of molecular mechanics and continuum models\u201d. ingentaconnect.com, 2, 95\u2013103, 2006.","journal-title":"ingentaconnect.com"},{"key":"e_1_3_4_94_1","doi-asserted-by":"publisher","DOI":"10.1146\/ANNUREV.BIOPHYS.30.1.211"},{"key":"e_1_3_4_95_1","doi-asserted-by":"publisher","DOI":"10.1186\/1475-2859-6-39"},{"key":"e_1_3_4_96_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.addr.2009.07.001"},{"issue":"29","key":"e_1_3_4_97_1","first-page":"237","article-title":"Leptospirosis worldwide, 1999","volume":"74","author":"World Health Organization","year":"1999","unstructured":"World Health Organization. (1999). Leptospirosis worldwide, 1999. Weekly Epidemiological Record\u2009=\u2009Relev\u00e9 \u00c9pid\u00e9miologique Hebdomadaire, 74(29), 237\u2013242.","journal-title":"Weekly Epidemiological Record\u2009=\u2009Relev\u00e9 \u00c9pid\u00e9miologique Hebdomadaire,"},{"key":"e_1_3_4_98_1","doi-asserted-by":"publisher","DOI":"10.1002\/0471250953.bi0508s52"},{"key":"e_1_3_4_99_1","doi-asserted-by":"publisher","DOI":"10.1002\/rmv.602"},{"key":"e_1_3_4_100_1","doi-asserted-by":"publisher","DOI":"10.1110\/ps.03479604"},{"key":"e_1_3_4_101_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-9-40"}],"container-title":["Journal of Biomolecular Structure and Dynamics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.tandfonline.com\/doi\/pdf\/10.1080\/07391102.2023.2279285","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,2,13]],"date-time":"2025-02-13T08:59:31Z","timestamp":1739437171000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/07391102.2023.2279285"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,11,10]]},"references-count":100,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2025,1,2]]}},"alternative-id":["10.1080\/07391102.2023.2279285"],"URL":"https:\/\/doi.org\/10.1080\/07391102.2023.2279285","relation":{},"ISSN":["0739-1102","1538-0254"],"issn-type":[{"type":"print","value":"0739-1102"},{"type":"electronic","value":"1538-0254"}],"subject":[],"published":{"date-parts":[[2023,11,10]]},"assertion":[{"value":"The publishing and review policy for this title is described in its Aims & Scope.","order":1,"name":"peerreview_statement","label":"Peer Review Statement"},{"value":"http:\/\/www.tandfonline.com\/action\/journalInformation?show=aimsScope&journalCode=tbsd20","URL":"http:\/\/www.tandfonline.com\/action\/journalInformation?show=aimsScope&journalCode=tbsd20","order":2,"name":"aims_and_scope_url","label":"Aim & Scope"},{"value":"2023-05-29","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2023-10-30","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2023-11-10","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}