{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,19]],"date-time":"2026-07-19T23:03:15Z","timestamp":1784502195780,"version":"3.55.0"},"reference-count":82,"publisher":"Informa UK Limited","issue":"11","license":[{"start":{"date-parts":[[2025,11,7]],"date-time":"2025-11-07T00:00:00Z","timestamp":1762473600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/doi.org\/10.1080\/policies-text-data-mining"}],"content-domain":{"domain":["www.tandfonline.com"],"crossmark-restriction":true},"short-container-title":["Journal of Biomolecular Structure and Dynamics"],"published-print":{"date-parts":[[2026,7,24]]},"DOI":"10.1080\/07391102.2025.2578693","type":"journal-article","created":{"date-parts":[[2025,11,7]],"date-time":"2025-11-07T14:21:45Z","timestamp":1762525305000},"page":"5322-5349","update-policy":"https:\/\/doi.org\/10.1080\/tandf_crossmark_01","source":"Crossref","is-referenced-by-count":0,"title":["Computational electrophysiology simulation study of the Dengue virus viroporins"],"prefix":"10.1080","volume":"44","author":[{"given":"Dwaipayan","family":"Chaudhuri","sequence":"first","affiliation":[{"name":"Department of Life Sciences, Presidency University","place":["Kolkata, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Satyabrata","family":"Majumder","sequence":"additional","affiliation":[{"name":"Department of Life Sciences, Presidency University","place":["Kolkata, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-5681-2612","authenticated-orcid":false,"given":"Kalyan","family":"Giri","sequence":"additional","affiliation":[{"name":"Department of Life Sciences, Presidency University","place":["Kolkata, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"301","published-online":{"date-parts":[[2025,11,7]]},"reference":[{"key":"e_1_3_2_2_1","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.M205393200"},{"key":"e_1_3_2_3_1","doi-asserted-by":"publisher","DOI":"10.1186\/PREACCEPT-6922344181153007"},{"key":"e_1_3_2_4_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbabio.2010.02.023"},{"key":"e_1_3_2_5_1","doi-asserted-by":"publisher","DOI":"10.1007\/s10495-009-0394-y"},{"key":"e_1_3_2_6_1","doi-asserted-by":"publisher","DOI":"10.1021\/ja0659370"},{"key":"e_1_3_2_7_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.bpj.2018.11.3126"},{"key":"e_1_3_2_8_1","doi-asserted-by":"publisher","DOI":"10.1099\/acmi.ac2019.po0333"},{"key":"e_1_3_2_9_1","doi-asserted-by":"publisher","DOI":"10.7554\/eLife.68404"},{"key":"e_1_3_2_10_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.celrep.2022.111943"},{"key":"e_1_3_2_11_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.neuron.2010.08.021"},{"key":"e_1_3_2_12_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tibs.2015.07.002"},{"key":"e_1_3_2_13_1","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.73.8.6257-6264.1999"},{"key":"e_1_3_2_14_1","doi-asserted-by":"publisher","DOI":"10.1529\/biophysj.107.124206"},{"key":"e_1_3_2_15_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1002708"},{"key":"e_1_3_2_16_1","doi-asserted-by":"publisher","DOI":"10.1128\/jvi.77.9.5266-5274.2003"},{"key":"e_1_3_2_17_1","doi-asserted-by":"publisher","DOI":"10.1039\/c8cp01282b"},{"key":"e_1_3_2_18_1","doi-asserted-by":"publisher","DOI":"10.1021\/jp710846y"},{"key":"e_1_3_2_19_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.470117"},{"key":"e_1_3_2_20_1","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.C000791200"},{"key":"e_1_3_2_21_1","article-title":"Flaviviruses alter endoplasmic reticulum-mitochondria contacts to regulate respiration and apoptosis","author":"Freppel W.","year":"2023","unstructured":"Freppel, W., Anton, A., Nouhi, Z., Mazeaud, C., Gilbert, C., Tremblay, N., Torres, V. A. B., Sow, A. A., Laulh\u00e9, X., Lamarre, A., Rodrigue-Gervais, I. G., Pichlmair, A., Scaturro, P., Hulea, L., & Chatel-Chaix, L. (2023). Flaviviruses alter endoplasmic reticulum-mitochondria contacts to regulate respiration and apoptosis. bioRxiv.","journal-title":"bioRxiv"},{"key":"e_1_3_2_22_1","doi-asserted-by":"publisher","DOI":"10.1110\/ps.073366208"},{"key":"e_1_3_2_23_1","doi-asserted-by":"publisher","DOI":"10.3390\/v7082824"},{"key":"e_1_3_2_24_1","article-title":"DeepTMHMM predicts alpha and beta transmembrane proteins using deep neural networks","author":"Hallgren J.","year":"2022","unstructured":"Hallgren, J., Tsirigos, K. D., Pedersen, M. D., Armenteros, J. J. A., Marcatili, P., Nielsen, H., Krogh, A., & Winther, O. (2022). DeepTMHMM predicts alpha and beta transmembrane proteins using deep neural networks. BioRxiv.","journal-title":"BioRxiv."},{"key":"e_1_3_2_25_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(07)61687-0"},{"key":"e_1_3_2_26_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.coviro.2012.06.003"},{"key":"e_1_3_2_27_1","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.23354"},{"key":"e_1_3_2_28_1","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.20945"},{"issue":"1","key":"e_1_3_2_29_1","first-page":"7","article-title":"Influenza viruses and their ion channels","volume":"50","author":"Kollerova E.","year":"2006","unstructured":"Kollerova, E., & Bet\u00e1kov\u00e1, T. (2006). Influenza viruses and their ion channels. Acta Virologica, 50(1), 7\u201316.","journal-title":"Acta Virologica"},{"key":"e_1_3_2_30_1","first-page":"88)","volume-title":"Proceedings of the 5th International Conference on Molecular Structural Biology","author":"Krissinel E.","year":"2003","unstructured":"Krissinel, E., & Henrick, K. (2003, September 3\u20137). Protein structure comparison in 3D based on secondary structure matching (PDBeFold) followed by Ca alignment, scored by a new structural similarity function [Paper presentation]. In A. J. Kungl & P. J. Kungl (Eds.), Proceedings of the 5th International Conference on Molecular Structural Biology, Vienna (p.88)."},{"key":"e_1_3_2_31_1","doi-asserted-by":"publisher","DOI":"10.1006\/jmbi.2000.4315"},{"key":"e_1_3_2_32_1","doi-asserted-by":"publisher","DOI":"10.1085\/jgp.202313347"},{"key":"e_1_3_2_33_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.bpj.2011.06.010"},{"key":"e_1_3_2_34_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbamem.2016.02.006"},{"key":"e_1_3_2_35_1","doi-asserted-by":"publisher","DOI":"10.3389\/fcimb.2022.1004608"},{"key":"e_1_3_2_36_1","doi-asserted-by":"publisher","DOI":"10.1186\/s12985-015-0456-4"},{"key":"e_1_3_2_37_1","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.00002-08"},{"key":"e_1_3_2_38_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbamem.2015.06.010"},{"key":"e_1_3_2_39_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0605402103"},{"key":"e_1_3_2_40_1","doi-asserted-by":"publisher","DOI":"10.3390\/v7082826"},{"key":"e_1_3_2_41_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-5822.2010.01460.x"},{"key":"e_1_3_2_42_1","doi-asserted-by":"publisher","DOI":"10.3390\/ijms18122649"},{"key":"e_1_3_2_43_1","doi-asserted-by":"publisher","DOI":"10.1038\/srep19893"},{"key":"e_1_3_2_44_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-019-12632-5"},{"key":"e_1_3_2_45_1","doi-asserted-by":"publisher","DOI":"10.3390\/v13101967"},{"key":"e_1_3_2_46_1","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro2820"},{"key":"e_1_3_2_47_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0112983"},{"key":"e_1_3_2_48_1","doi-asserted-by":"publisher","DOI":"10.1021\/bi061530w"},{"key":"e_1_3_2_49_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1004294"},{"key":"e_1_3_2_50_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbamem.2010.04.015"},{"key":"e_1_3_2_51_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00232-005-0744-9"},{"key":"e_1_3_2_52_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbamem.2006.06.027"},{"key":"e_1_3_2_53_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0006-3495(97)78327-9"},{"key":"e_1_3_2_54_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.1826056"},{"key":"e_1_3_2_55_1","doi-asserted-by":"publisher","DOI":"10.1186\/s13071-018-2830-8"},{"key":"e_1_3_2_56_1","doi-asserted-by":"publisher","DOI":"10.1093\/protein\/5.1.53"},{"key":"e_1_3_2_57_1","doi-asserted-by":"publisher","DOI":"10.1016\/s0005-2736(02)00576-x"},{"key":"e_1_3_2_58_1","doi-asserted-by":"publisher","DOI":"10.1021\/acs.jctc.5b00999"},{"key":"e_1_3_2_59_1","doi-asserted-by":"publisher","DOI":"10.1099\/vir.0.000201"},{"key":"e_1_3_2_60_1","doi-asserted-by":"publisher","DOI":"10.3390\/ijms22010272"},{"key":"e_1_3_2_61_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.febslet.2007.02.005"},{"key":"e_1_3_2_62_1","doi-asserted-by":"publisher","DOI":"10.4103\/2229-5151.147538"},{"key":"e_1_3_2_63_1","doi-asserted-by":"publisher","DOI":"10.1080\/21505594.2017.1356540"},{"key":"e_1_3_2_64_1","doi-asserted-by":"publisher","DOI":"10.3389\/fimmu.2020.00352"},{"key":"e_1_3_2_65_1","doi-asserted-by":"publisher","DOI":"10.1016\/s0005-2736(97)00279-4"},{"key":"e_1_3_2_66_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkad1012"},{"key":"e_1_3_2_67_1","doi-asserted-by":"publisher","DOI":"10.1021\/bi981802y"},{"key":"e_1_3_2_68_1","doi-asserted-by":"publisher","DOI":"10.3390\/biomedicines10030641"},{"key":"e_1_3_2_69_1","doi-asserted-by":"publisher","DOI":"10.3390\/v11070632"},{"key":"e_1_3_2_70_1","doi-asserted-by":"publisher","DOI":"10.1021\/ja807330g"},{"key":"e_1_3_2_71_1","doi-asserted-by":"publisher","DOI":"10.1021\/acsnano.6b07865"},{"key":"e_1_3_2_72_1","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.20291"},{"key":"e_1_3_2_73_1","doi-asserted-by":"publisher","DOI":"10.1093\/emboj\/16.12.3519"},{"key":"e_1_3_2_74_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbamem.2010.05.006"},{"key":"e_1_3_2_75_1","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.06243-11"},{"key":"e_1_3_2_76_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.virol.2004.09.033"},{"key":"e_1_3_2_77_1","doi-asserted-by":"publisher","DOI":"10.1016\/0006-291x(91)91627-o"},{"key":"e_1_3_2_78_1","doi-asserted-by":"publisher","DOI":"10.3389\/fimmu.2022.890549"},{"key":"e_1_3_2_79_1","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.02424-12"},{"key":"e_1_3_2_80_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gky398"},{"key":"e_1_3_2_81_1","doi-asserted-by":"publisher","DOI":"10.1063\/1.1511726"},{"key":"e_1_3_2_82_1","doi-asserted-by":"publisher","DOI":"10.5808\/gi.23035"},{"key":"e_1_3_2_83_1","doi-asserted-by":"publisher","DOI":"10.3390\/ijms18091838"}],"container-title":["Journal of Biomolecular Structure and Dynamics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.tandfonline.com\/doi\/pdf\/10.1080\/07391102.2025.2578693","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/www.tandfonline.com\/doi\/full-xml\/10.1080\/07391102.2025.2578693","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/www.tandfonline.com\/doi\/pdf\/10.1080\/07391102.2025.2578693","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,7,19]],"date-time":"2026-07-19T23:01:12Z","timestamp":1784502072000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/07391102.2025.2578693"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2025,11,7]]},"references-count":82,"journal-issue":{"issue":"11","published-print":{"date-parts":[[2026,7,24]]}},"alternative-id":["10.1080\/07391102.2025.2578693"],"URL":"https:\/\/doi.org\/10.1080\/07391102.2025.2578693","relation":{},"ISSN":["0739-1102","1538-0254"],"issn-type":[{"value":"0739-1102","type":"print"},{"value":"1538-0254","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,11,7]]},"assertion":[{"value":"The publishing and review policy for this title is described in its Aims & Scope.","order":1,"name":"peerreview_statement","label":"Peer Review Statement"},{"value":"http:\/\/www.tandfonline.com\/action\/journalInformation?show=aimsScope&journalCode=tbsd20","URL":"http:\/\/www.tandfonline.com\/action\/journalInformation?show=aimsScope&journalCode=tbsd20","order":2,"name":"aims_and_scope_url","label":"Aim & Scope"},{"value":"2025-06-01","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-10-16","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-11-07","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}