{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,31]],"date-time":"2026-01-31T17:06:18Z","timestamp":1769879178928,"version":"3.49.0"},"reference-count":83,"publisher":"Informa UK Limited","issue":"1","license":[{"start":{"date-parts":[[2023,6,20]],"date-time":"2023-06-20T00:00:00Z","timestamp":1687219200000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"name":"Canberra Hospital Private Practice Trust Fund"}],"content-domain":{"domain":["www.tandfonline.com"],"crossmark-restriction":true},"short-container-title":["Gut Microbes"],"published-print":{"date-parts":[[2023,12,31]]},"DOI":"10.1080\/19490976.2023.2223332","type":"journal-article","created":{"date-parts":[[2023,6,21]],"date-time":"2023-06-21T06:30:00Z","timestamp":1687329000000},"update-policy":"https:\/\/doi.org\/10.1080\/tandf_crossmark_01","source":"Crossref","is-referenced-by-count":4,"title":["Comparative genomics and phenotypic studies to determine site-specificity of\n            <i>Escherichia coli<\/i>\n            in the lower gastrointestinal tract of humans"],"prefix":"10.1080","volume":"15","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6590-0067","authenticated-orcid":false,"given":"Rasel","family":"Barua","sequence":"first","affiliation":[{"name":"College of Health and Medicine, Australian National University, ACT, Canberra, Australia"},{"name":"Research School of Biology, Australian National University, Canberra, Australia"},{"name":"IBD Research Laboratory, Canberra Hospital, ACT, Canberra, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1891-8410","authenticated-orcid":false,"given":"Paul","family":"Pavli","sequence":"additional","affiliation":[{"name":"College of Health and Medicine, Australian National University, ACT, Canberra, Australia"},{"name":"IBD Research Laboratory, Canberra Hospital, ACT, Canberra, Australia"},{"name":"Gastroenterology and Hepatology Unit, Canberra Hospital, ACT, Canberra, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2880-3003","authenticated-orcid":false,"given":"David M","family":"Gordon","sequence":"additional","affiliation":[{"name":"Research School of Biology, Australian National University, Canberra, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1599-9913","authenticated-orcid":false,"given":"Claire L","family":"O\u2019Brien","sequence":"additional","affiliation":[{"name":"IBD Research Laboratory, Canberra Hospital, ACT, Canberra, Australia"},{"name":"Centre for Research in Therapeutic Solutions, Faculty of Science and Technology, University of Canberra, ACT, Canberra, Australia"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"301","published-online":{"date-parts":[[2023,6,20]]},"reference":[{"key":"e_1_3_7_2_1","doi-asserted-by":"publisher","DOI":"10.1111\/1758-2229.12168"},{"key":"e_1_3_7_3_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01423-13"},{"key":"e_1_3_7_4_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41396-019-0435-7"},{"key":"e_1_3_7_5_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1758-2229.2012.00374.x"},{"key":"e_1_3_7_6_1","doi-asserted-by":"publisher","DOI":"10.1111\/1758-2229.12300"},{"key":"e_1_3_7_7_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41579-020-0416-x"},{"key":"e_1_3_7_8_1","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro2298"},{"key":"e_1_3_7_9_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-2920.2008.01636.x"},{"key":"e_1_3_7_10_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-2920.2006.01077.x"},{"key":"e_1_3_7_11_1","doi-asserted-by":"publisher","DOI":"10.1101\/gr.216606.116"},{"key":"e_1_3_7_12_1","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.00125-13"},{"key":"e_1_3_7_13_1","doi-asserted-by":"publisher","DOI":"10.1002\/mbo3.1032"},{"key":"e_1_3_7_14_1","doi-asserted-by":"publisher","DOI":"10.1089\/fpd.2014.1860"},{"key":"e_1_3_7_15_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.micinf.2005.10.011"},{"key":"e_1_3_7_16_1","doi-asserted-by":"publisher","DOI":"10.1264\/jsme2.ME17017"},{"key":"e_1_3_7_17_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00276-002-0057-y"},{"key":"e_1_3_7_18_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ejps.2019.04.013"},{"key":"e_1_3_7_19_1","doi-asserted-by":"publisher","DOI":"10.1111\/1462-2920.14028"},{"key":"e_1_3_7_20_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.02377-17"},{"key":"e_1_3_7_21_1","doi-asserted-by":"publisher","DOI":"10.1111\/mec.13851"},{"key":"e_1_3_7_22_1","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2017.69"},{"key":"e_1_3_7_23_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pbio.2001477"},{"key":"e_1_3_7_24_1","doi-asserted-by":"publisher","DOI":"10.1128\/mSphere.01176-20"},{"key":"e_1_3_7_25_1","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms9945"},{"key":"e_1_3_7_26_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-2920.2007.01520.x"},{"key":"e_1_3_7_27_1","doi-asserted-by":"publisher","DOI":"10.1093\/ofid\/ofw129"},{"key":"e_1_3_7_28_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00358-10"},{"key":"e_1_3_7_29_1","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.41.11.4924-4929.2003"},{"key":"e_1_3_7_30_1","volume-title":"Medical Microbiology","author":"Evans DJ","year":"1996","unstructured":"Evans DJ Jr., Evans DG. Escherichia Coli in Diarrheal disease. In: Baron S, editor Medical Microbiology. Galveston (TX): University of Texas Medical Branch at Galveston, Copyright \u00a9 1996, The University of Texas Medical Branch at Galveston. 1996. p. 251."},{"key":"e_1_3_7_31_1","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.71.3.1505-1512.2003"},{"key":"e_1_3_7_32_1","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.18.3.465-483.2005"},{"key":"e_1_3_7_33_1","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.26733-0"},{"key":"e_1_3_7_34_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01688-12"},{"key":"e_1_3_7_35_1","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.47.7.2161-2168.2003"},{"key":"e_1_3_7_36_1","doi-asserted-by":"publisher","DOI":"10.1093\/infdis\/jiy459"},{"key":"e_1_3_7_37_1","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro818"},{"key":"e_1_3_7_38_1","doi-asserted-by":"publisher","DOI":"10.1186\/s13099-019-0290-0"},{"key":"e_1_3_7_39_1","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.00752-12"},{"key":"e_1_3_7_40_1","doi-asserted-by":"publisher","DOI":"10.1101\/cshperspect.a018077"},{"key":"e_1_3_7_41_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41579-021-00534-7"},{"key":"e_1_3_7_42_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1009872"},{"key":"e_1_3_7_43_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1906958116"},{"key":"e_1_3_7_44_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.vetmic.2020.108783"},{"key":"e_1_3_7_45_1","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2020.00108"},{"key":"e_1_3_7_46_1","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2020.00580"},{"key":"e_1_3_7_47_1","doi-asserted-by":"publisher","DOI":"10.1002\/1521-1878(200012)22:12<1067:AID-BIES4>3.0.CO;2-Q"},{"key":"e_1_3_7_48_1","doi-asserted-by":"publisher","DOI":"10.7554\/eLife.22939"},{"key":"e_1_3_7_49_1","doi-asserted-by":"publisher","DOI":"10.2217\/fmb.14.86"},{"key":"e_1_3_7_50_1","doi-asserted-by":"publisher","DOI":"10.1111\/mec.15232"},{"key":"e_1_3_7_51_1","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.70.8.4362-4368.2002"},{"key":"e_1_3_7_52_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01879-06"},{"key":"e_1_3_7_53_1","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.2006\/003178-0"},{"key":"e_1_3_7_54_1","doi-asserted-by":"publisher","DOI":"10.3389\/fcimb.2012.00090"},{"key":"e_1_3_7_55_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1005519"},{"key":"e_1_3_7_56_1","doi-asserted-by":"publisher","DOI":"10.1111\/1462-2920.13106"},{"key":"e_1_3_7_57_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.micinf.2009.10.002"},{"key":"e_1_3_7_58_1","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msm172"},{"key":"e_1_3_7_59_1","doi-asserted-by":"publisher","DOI":"10.1128\/microbiolspec.AME-0014-2020"},{"key":"e_1_3_7_60_1","doi-asserted-by":"publisher","DOI":"10.1093\/gastro\/goy052"},{"key":"e_1_3_7_61_1","doi-asserted-by":"publisher","DOI":"10.1111\/imr.12182"},{"key":"e_1_3_7_62_1","doi-asserted-by":"publisher","DOI":"10.1038\/nrgastro.2013.35"},{"key":"e_1_3_7_63_1","doi-asserted-by":"publisher","DOI":"10.1080\/19490976.2018.1448741"},{"key":"e_1_3_7_64_1","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.R116.767434"},{"key":"e_1_3_7_65_1","doi-asserted-by":"publisher","DOI":"10.1016\/B978-0-12-409547-2.11098-4"},{"key":"e_1_3_7_66_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0150519"},{"key":"e_1_3_7_67_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijmm.2010.04.021"},{"key":"e_1_3_7_68_1","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.01423-12"},{"key":"e_1_3_7_69_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0046547"},{"key":"e_1_3_7_70_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0088374"},{"key":"e_1_3_7_71_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.sjbs.2020.11.008"},{"key":"e_1_3_7_72_1","doi-asserted-by":"publisher","DOI":"10.1086\/285289"},{"key":"e_1_3_7_73_1","doi-asserted-by":"publisher","DOI":"10.1126\/science.1243357"},{"key":"e_1_3_7_74_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-37195-0_13"},{"key":"e_1_3_7_75_1","doi-asserted-by":"publisher","DOI":"10.1101\/gr.2289704"},{"key":"e_1_3_7_76_1","doi-asserted-by":"publisher","DOI":"10.1099\/mgen.0.000192"},{"key":"e_1_3_7_77_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2958.2006.05172.x"},{"key":"e_1_3_7_78_1","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.00008-15"},{"key":"e_1_3_7_79_1","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.00737-17"},{"key":"e_1_3_7_80_1","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkaa345"},{"key":"e_1_3_7_81_1","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.02412-14"},{"key":"e_1_3_7_82_1","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.03617-13"},{"key":"e_1_3_7_83_1","doi-asserted-by":"publisher","DOI":"10.1038\/srep08365"},{"key":"e_1_3_7_84_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkz943"}],"container-title":["Gut Microbes"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.tandfonline.com\/doi\/pdf\/10.1080\/19490976.2023.2223332","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,3,28]],"date-time":"2024-03-28T22:48:19Z","timestamp":1711666099000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.tandfonline.com\/doi\/full\/10.1080\/19490976.2023.2223332"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2023,6,20]]},"references-count":83,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2023,12,31]]}},"alternative-id":["10.1080\/19490976.2023.2223332"],"URL":"https:\/\/doi.org\/10.1080\/19490976.2023.2223332","relation":{},"ISSN":["1949-0976","1949-0984"],"issn-type":[{"value":"1949-0976","type":"print"},{"value":"1949-0984","type":"electronic"}],"subject":[],"published":{"date-parts":[[2023,6,20]]},"assertion":[{"value":"The publishing and review policy for this title is described in its Aims & Scope.","order":1,"name":"peerreview_statement","label":"Peer Review Statement"},{"value":"http:\/\/www.tandfonline.com\/action\/journalInformation?show=aimsScope&journalCode=kgmi20","URL":"http:\/\/www.tandfonline.com\/action\/journalInformation?show=aimsScope&journalCode=kgmi20","order":2,"name":"aims_and_scope_url","label":"Aim & Scope"},{"value":"2023-04-26","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2023-06-06","order":1,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2023-06-20","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"2223332"}}