{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,4,28]],"date-time":"2026-04-28T12:19:11Z","timestamp":1777378751561,"version":"3.51.4"},"reference-count":18,"publisher":"SAGE Publications","issue":"6","license":[{"start":{"date-parts":[[2013,6,1]],"date-time":"2013-06-01T00:00:00Z","timestamp":1370044800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.sagepub.com\/page\/policies\/text-and-data-mining-license"}],"content-domain":{"domain":["journals.sagepub.com"],"crossmark-restriction":true},"short-container-title":["AIDS Research and Human Retroviruses"],"published-print":{"date-parts":[[2013,6]]},"abstract":"<jats:p>\n                    HIV-1 infection is characterized by genetic diversity, with multiple subtypes and recombinant variants circulating, particularly in sub-Saharan Africa. During the Rwandan genocide, many women experienced multiple rapes and some became HIV-1 infected. We studied plasma and peripheral blood mononuclear cells (PBMCs) from 30 infected women comprising two exposure groups: those with numerous contacts, raped multiple times, and women with one lifetime sexual partner and no history of rape. Population-based sequences from\n                    <jats:italic toggle=\"yes\">gag<\/jats:italic>\n                    ,\n                    <jats:italic toggle=\"yes\">pol<\/jats:italic>\n                    , and\n                    <jats:italic toggle=\"yes\">env<\/jats:italic>\n                    genes were analyzed to determine HIV-1 subtypes and intersubtype recombination. Individual plasma-derived variants from 12 women were also analyzed. Subtype A was found in 24\/30 (80%), intersubtype recombination (AC and AD) in 4\/30 (13%), and subtypes C and D in 1\/30 each. In two subjects, the pattern of HIV-1 recombination differed between plasma and PBMC-derived sequences. Intersubtype recombination was common, although there were no significant differences in subtype or recombination rates between exposure groups.\n                  <\/jats:p>","DOI":"10.1089\/aid.2012.0095","type":"journal-article","created":{"date-parts":[[2013,3,4]],"date-time":"2013-03-04T12:40:15Z","timestamp":1362400815000},"page":"957-962","update-policy":"https:\/\/doi.org\/10.1177\/sage-journals-update-policy","source":"Crossref","is-referenced-by-count":7,"title":["Molecular Epidemiology of HIV Type 1 Subtypes in Rwanda"],"prefix":"10.1177","volume":"29","author":[{"given":"Kimdar S.","family":"Kemal","sequence":"first","affiliation":[{"name":"Wadsworth Center"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kathryn","family":"Anastos","sequence":"additional","affiliation":[{"name":"Montefiore Medical Center"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Barbara","family":"Weiser","sequence":"additional","affiliation":[{"name":"Wadsworth Center"},{"name":"Albany Medical College"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Christina M.","family":"Ramirez","sequence":"additional","affiliation":[{"name":"University of California"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Qiuhu","family":"Shi","sequence":"additional","affiliation":[{"name":"School of Health Sciences and Practice"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Harold","family":"Burger","sequence":"additional","affiliation":[{"name":"Wadsworth Center"},{"name":"Albany Medical College"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"179","published-online":{"date-parts":[[2013,6,1]]},"reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(02)11804-6"},{"key":"e_1_3_3_3_2","doi-asserted-by":"publisher","DOI":"10.1097\/QAD.0b013e328308de0e"},{"key":"e_1_3_3_4_2","doi-asserted-by":"publisher","DOI":"10.1086\/421504"},{"key":"e_1_3_3_5_2","doi-asserted-by":"publisher","DOI":"10.1089\/aid.2011.0383"},{"key":"e_1_3_3_6_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.2134064100"},{"key":"e_1_3_3_7_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.79.1.353-363.2005"},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.virol.2010.04.008"},{"key":"e_1_3_3_9_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1000274"},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.1006\/viro.1996.8318"},{"key":"e_1_3_3_11_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.72.7.5680-5698.1998"},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.1086\/510855"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0166-0934(98)00133-5"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-7-265"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.77.24.13376-13388.2003"},{"key":"e_1_3_3_16_2","doi-asserted-by":"publisher","DOI":"10.1128\/jvi.66.5.3183-3187.1992"},{"key":"e_1_3_3_17_2","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.79.16.10701-10708.2005"},{"key":"e_1_3_3_18_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(04)15596-7"},{"key":"e_1_3_3_19_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0802203105"}],"container-title":["AIDS Research and Human Retroviruses"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.sagepub.com\/doi\/pdf\/10.1089\/aid.2012.0095","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.sagepub.com\/doi\/full-xml\/10.1089\/aid.2012.0095","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.sagepub.com\/doi\/pdf\/10.1089\/aid.2012.0095","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,4,28]],"date-time":"2026-04-28T09:12:10Z","timestamp":1777367530000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.sagepub.com\/doi\/10.1089\/aid.2012.0095"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013,6]]},"references-count":18,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2013,6]]}},"alternative-id":["10.1089\/aid.2012.0095"],"URL":"https:\/\/doi.org\/10.1089\/aid.2012.0095","relation":{},"ISSN":["0889-2229","1931-8405"],"issn-type":[{"value":"0889-2229","type":"print"},{"value":"1931-8405","type":"electronic"}],"subject":[],"published":{"date-parts":[[2013,6]]}}}