{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,23]],"date-time":"2026-09-23T21:05:16Z","timestamp":1790197516641,"version":"4.1.0"},"reference-count":56,"publisher":"SAGE Publications","issue":"5","license":[{"start":{"date-parts":[[2014,10,1]],"date-time":"2014-10-01T00:00:00Z","timestamp":1412121600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.sagepub.com\/page\/policies\/text-and-data-mining-license"}],"content-domain":{"domain":["journals.sagepub.com"],"crossmark-restriction":true},"short-container-title":["Microbial Drug Resistance"],"published-print":{"date-parts":[[2014,10]]},"abstract":"<jats:p>\n                    Prevalence and genetic relatedness were determined for third-generation cephalosporin-resistant\n                    <jats:italic toggle=\"yes\">Escherichia coli<\/jats:italic>\n                    (3GC-R-\n                    <jats:italic toggle=\"yes\">Ec<\/jats:italic>\n                    ) detected in Swiss beef, veal, pork, and poultry retail meat. Samples from meat-packing plants (MPPs) processing 70% of the slaughtered animals in Switzerland were purchased at different intervals between April and June 2013 and analyzed. Sixty-nine 3GC-R-\n                    <jats:italic toggle=\"yes\">Ec<\/jats:italic>\n                    isolates were obtained and characterized by microarray, PCR\/DNA sequencing, Multi Locus Sequence Typing (MLST), and plasmid replicon typing. Plasmids of selected strains were transformed by electroporation into\n                    <jats:italic toggle=\"yes\">E. coli<\/jats:italic>\n                    TOP10 cells and analyzed by plasmid MLST. The prevalence of 3GC-R-\n                    <jats:italic toggle=\"yes\">Ec<\/jats:italic>\n                    was 73.3% in chicken and 2% in beef meat. No 3GC-R-\n                    <jats:italic toggle=\"yes\">Ec<\/jats:italic>\n                    were found in pork and veal. Overall, the\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>CTX-M-1<\/jats:sub>\n                    (79.4%),\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>CMY-2<\/jats:sub>\n                    (17.6%),\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>CMY-4<\/jats:sub>\n                    (1.5%), and\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>SHV-12<\/jats:sub>\n                    (1.5%) \u03b2-lactamase genes were detected, as well as other genes conferring resistance to chloramphenicol (\n                    <jats:italic toggle=\"yes\">cmlA1-like<\/jats:italic>\n                    ), sulfonamides (\n                    <jats:italic toggle=\"yes\">sul<\/jats:italic>\n                    ), tetracycline (\n                    <jats:italic toggle=\"yes\">tet<\/jats:italic>\n                    ), and trimethoprim (\n                    <jats:italic toggle=\"yes\">dfrA<\/jats:italic>\n                    ). The 3GC-R-\n                    <jats:italic toggle=\"yes\">Ec<\/jats:italic>\n                    from chicken meat often harbored virulence genes associated with avian pathogens. Plasmid incompatibility (Inc) groups IncI1, IncFIB, IncFII, and IncB\/O were the most frequent. A high rate of clonality (\n                    <jats:italic toggle=\"yes\">e.g.,<\/jats:italic>\n                    ST1304, ST38, and ST93) among isolates from the same MPPs suggests that strains persist at the plant and spread to meat at the carcass-processing stage. Additionally, the presence of the\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>CTX-M-1<\/jats:sub>\n                    gene on an IncI1 plasmid sequence type 3 (IncI1\/pST3) in genetically diverse strains indicates interstrain spread of an epidemic plasmid. The\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>CMY-2<\/jats:sub>\n                    and\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>CMY-4<\/jats:sub>\n                    genes were located on IncB\/O plasmids. This study represents the first comprehensive assessment of 3GC-R-\n                    <jats:italic toggle=\"yes\">Ec<\/jats:italic>\n                    in meat in Switzerland. It demonstrates the need for monitoring contaminants and for the adaptation of the Hazard Analysis and Critical Control Point concept to avoid the spread of multidrug-resistant bacteria through the food chain.\n                  <\/jats:p>","DOI":"10.1089\/mdr.2013.0210","type":"journal-article","created":{"date-parts":[[2014,4,28]],"date-time":"2014-04-28T15:45:31Z","timestamp":1398699931000},"page":"485-494","update-policy":"https:\/\/doi.org\/10.1177\/sage-journals-update-policy","source":"Crossref","is-referenced-by-count":57,"title":["Occurrence and Genetic Characteristics of Third-Generation Cephalosporin-Resistant\n                    <i>Escherichia coli<\/i>\n                    in Swiss Retail Meat"],"prefix":"10.1177","volume":"20","author":[{"given":"Debora","family":"Vogt","sequence":"first","affiliation":[{"name":"University of Bern","place":["Switzerland"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gudrun","family":"Overesch","sequence":"additional","affiliation":[{"name":"University of Bern","place":["Switzerland"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andrea","family":"Endimiani","sequence":"additional","affiliation":[{"name":"University of Bern","place":["Switzerland"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alexandra","family":"Collaud","sequence":"additional","affiliation":[{"name":"University of Bern","place":["Switzerland"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Andreas","family":"Thomann","sequence":"additional","affiliation":[{"name":"University of Bern","place":["Switzerland"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Vincent","family":"Perreten","sequence":"additional","affiliation":[{"name":"University of Bern","place":["Switzerland"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"179","published-online":{"date-parts":[[2014,10]]},"reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"crossref","first-page":"112","DOI":"10.4315\/0362-028X.JFP-13-120","article-title":"Characteristics of extended-spectrum cephalosporin-resistant Escherichia coli isolated from Swiss and imported poultry meat","volume":"77","author":"Abgottspon H.","year":"2014","unstructured":"Abgottspon H., , Stephan R., , Bagutti C., , Brodmann P., , H\u00e4chler H., , and Zurfluh K. 2014. Characteristics of extended-spectrum cephalosporin-resistant Escherichia coli isolated from Swiss and imported poultry meat. J. Food Prot., 77:112\u2013115.","journal-title":"J. Food Prot."},{"key":"e_1_3_3_3_2","doi-asserted-by":"crossref","first-page":"E238","DOI":"10.1111\/1469-0691.12128","article-title":"IncI1 plasmids associated with the spread of CMY-2, CTX-M-1 and SHV-12 in Escherichia coli of animal and human origin","volume":"19","author":"Accogli M.","year":"2013","unstructured":"Accogli M., , Fortini D., , Giufre M., , Graziani C., , Dolejska M., , Carattoli A., , and Cerquetti M. 2013. IncI1 plasmids associated with the spread of CMY-2, CTX-M-1 and SHV-12 in Escherichia coli of animal and human origin. Clin. Microbiol. Infect., 19:E238\u2013E240.","journal-title":"Clin. Microbiol. 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