{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,30]],"date-time":"2026-09-30T10:50:23Z","timestamp":1790765423332,"version":"4.1.0"},"reference-count":51,"publisher":"SAGE Publications","issue":"9","license":[{"start":{"date-parts":[[2018,11,1]],"date-time":"2018-11-01T00:00:00Z","timestamp":1541030400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.sagepub.com\/page\/policies\/text-and-data-mining-license"}],"content-domain":{"domain":["journals.sagepub.com"],"crossmark-restriction":true},"short-container-title":["Microbial Drug Resistance"],"published-print":{"date-parts":[[2018,11]]},"abstract":"<jats:sec>\n                    <jats:title>Objective:<\/jats:title>\n                    <jats:p>\n                      To characterize antibiotic resistance genes (ARGs) and heavy metal resistance genes (HMRGs) of\n                      <jats:italic toggle=\"yes\">Escherichia coli<\/jats:italic>\n                      and\n                      <jats:italic toggle=\"yes\">Enterococcus faecium<\/jats:italic>\n                      isolated from the sediment and\n                      <jats:italic toggle=\"yes\">Lactococcus garvieae<\/jats:italic>\n                      isolated from fish.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Materials and Methods:<\/jats:title>\n                    <jats:p>\n                      The isolated bacteria were identified by sequencing 16S rRNA genes. After identification of the bacteria, tetracycline (\n                      <jats:italic toggle=\"yes\">tet<\/jats:italic>\n                      A\n                      <jats:italic toggle=\"yes\">, tet<\/jats:italic>\n                      B\n                      <jats:italic toggle=\"yes\">, tet<\/jats:italic>\n                      D), erythromycin (\n                      <jats:italic toggle=\"yes\">ere<\/jats:italic>\n                      A,\n                      <jats:italic toggle=\"yes\">ere<\/jats:italic>\n                      B), sulfonamides (\n                      <jats:italic toggle=\"yes\">sul<\/jats:italic>\n                      I\n                      <jats:italic toggle=\"yes\">, sul<\/jats:italic>\n                      II), trimethoprim (\n                      <jats:italic toggle=\"yes\">dhfr<\/jats:italic>\n                      A1), \u03b2-lactam (\n                      <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                      <jats:sub>TEM<\/jats:sub>\n                      <jats:italic toggle=\"yes\">, bla<\/jats:italic>\n                      <jats:sub>CTX<\/jats:sub>\n                      <jats:italic toggle=\"yes\">, amp<\/jats:italic>\n                      C), florfenicol (\n                      <jats:italic toggle=\"yes\">flo<\/jats:italic>\n                      R), and class 1 integron (\n                      <jats:italic toggle=\"yes\">Int<\/jats:italic>\n                      1) resistance gene were then determined. The presence of HMRGs, including copper (\n                      <jats:italic toggle=\"yes\">cop<\/jats:italic>\n                      A), mercury (\n                      <jats:italic toggle=\"yes\">mer<\/jats:italic>\n                      ), cadmium, zinc, cobalt (\n                      <jats:italic toggle=\"yes\">czc<\/jats:italic>\n                      ), and nickel, cobalt cadmium (\n                      <jats:italic toggle=\"yes\">ncc<\/jats:italic>\n                      ), was also analyzed by PCR. All strains were checked for the presence of ARGs and\/or HMRGs on the plasmid.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results:<\/jats:title>\n                    <jats:p>\n                      The frequency of the \u03b2-lactam resistance gene was highest and ranged from 49.7% to 62.3%, followed by sulfonamides, tetracyclines, phenicols, and macrolide resistance genes. The cage culture fish farming practice showed significant effects on ARG frequency of bacteria isolated from the sediment, whereas it had no effect on the frequency of HMRGs. The most prevalent HMRG was determined as mercury-resistant\n                      <jats:italic toggle=\"yes\">mer<\/jats:italic>\n                      gene in all bacteria. All four of the HMRGs were located on plasmids with frequency ranging from 1.20% to 32.53%. The presence of ARGs on plasmids ranged between 2.2% (\n                      <jats:italic toggle=\"yes\">Dhfr<\/jats:italic>\n                      1) and 75% (\n                      <jats:italic toggle=\"yes\">Amp<\/jats:italic>\n                      C, blactx, tetB), and plasmids did not contain\n                      <jats:italic toggle=\"yes\">tetD<\/jats:italic>\n                      and\n                      <jats:italic toggle=\"yes\">ereB<\/jats:italic>\n                      genes.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusion:<\/jats:title>\n                    <jats:p>The results of this study indicate that fish farming can significantly influence the antimicrobial resistance properties of bacteria isolated from sediment samples.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.1089\/mdr.2018.0040","type":"journal-article","created":{"date-parts":[[2018,5,7]],"date-time":"2018-05-07T11:29:48Z","timestamp":1525692588000},"page":"1422-1430","update-policy":"https:\/\/doi.org\/10.1177\/sage-journals-update-policy","source":"Crossref","is-referenced-by-count":32,"title":["Effects of Cage Farming on Antimicrobial and Heavy Metal Resistance of\n                    <i>Escherichia coli, Enterococcus faecium,<\/i>\n                    and\n                    <i>Lactococcus garvieae<\/i>"],"prefix":"10.1177","volume":"24","author":[{"given":"Mustafa","family":"Ture","sequence":"first","affiliation":[{"name":"Central Fisheries Research Institute","place":["Turkey"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ilhan","family":"Altinok","sequence":"additional","affiliation":[{"name":"Karadeniz Technical University","place":["Turkey"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Huseyin","family":"Alp","sequence":"additional","affiliation":[{"name":"Central Fisheries Research Institute","place":["Turkey"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"179","published-online":{"date-parts":[[2018,11,12]]},"reference":[{"key":"e_1_3_3_2_2","unstructured":"(IWG-SCC). 2015. 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