{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,3]],"date-time":"2026-10-03T17:46:30Z","timestamp":1791049590008,"version":"4.1.0"},"reference-count":11,"publisher":"SAGE Publications","issue":"5","license":[{"start":{"date-parts":[[2019,5,30]],"date-time":"2019-05-30T00:00:00Z","timestamp":1559174400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2019,5,30]],"date-time":"2019-05-30T00:00:00Z","timestamp":1559174400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.sagepub.com\/page\/policies\/text-and-data-mining-license"}],"content-domain":{"domain":["journals.sagepub.com"],"crossmark-restriction":true},"short-container-title":["Microbial Drug Resistance"],"published-print":{"date-parts":[[2019,6,1]]},"abstract":"<jats:p>\n                    <jats:italic toggle=\"yes\">Candida auris<\/jats:italic>\n                    is an emerging multidrug-resistant yeast with high mortality. We report the sentinel\n                    <jats:italic toggle=\"yes\">C. auris<\/jats:italic>\n                    case on the United States West Coast in a patient who relocated from India. We identified close phylogenetic relatedness to the South Asia clade and\n                    <jats:italic toggle=\"yes\">ERG11<\/jats:italic>\n                    Y132F and\n                    <jats:italic toggle=\"yes\">FKS1<\/jats:italic>\n                    S639Y mutations potentially explaining antifungal resistance.\n                  <\/jats:p>","DOI":"10.1089\/mdr.2018.0408","type":"journal-article","created":{"date-parts":[[2019,6,4]],"date-time":"2019-06-04T15:19:16Z","timestamp":1559661556000},"page":"677-680","update-policy":"https:\/\/doi.org\/10.1177\/sage-journals-update-policy","source":"Crossref","is-referenced-by-count":20,"title":["Sentinel Case of\n                    <i>Candida auris<\/i>\n                    in the Western United States Following Prolonged Occult Colonization in a Returned Traveler from India"],"prefix":"10.1177","volume":"25","author":[{"given":"Michael H.","family":"Woodworth","sequence":"first","affiliation":[{"name":"Division of Infectious Diseases, Department of Medicine, Emory University School of Medicine, Atlanta, Georgia."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"David","family":"Dynerman","sequence":"additional","affiliation":[{"name":"Chan Zuckerberg Biohub, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Emily D.","family":"Crawford","sequence":"additional","affiliation":[{"name":"Chan Zuckerberg Biohub, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sarah B.","family":"Doernberg","sequence":"additional","affiliation":[{"name":"Division of Infectious Diseases, Department of Medicine, University of California, San Francisco, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lynn","family":"Ramirez-Avila","sequence":"additional","affiliation":[{"name":"Division of Pediatric Infectious Diseases and Global Health, Department of Pediatrics, University of California, San Francisco, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Paula Hayakawa","family":"Serpa","sequence":"additional","affiliation":[{"name":"Chan Zuckerberg Biohub, San Francisco, California."},{"name":"Division of Infectious Diseases, Department of Medicine, University of California, San Francisco, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Amy","family":"Nichols","sequence":"additional","affiliation":[{"name":"Hospital Epidemiology and Infection Control, University of California, San Francisco, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lucy M.","family":"Li","sequence":"additional","affiliation":[{"name":"Chan Zuckerberg Biohub, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Amy","family":"Lyden","sequence":"additional","affiliation":[{"name":"Chan Zuckerberg Biohub, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cristina M.","family":"Tato","sequence":"additional","affiliation":[{"name":"Chan Zuckerberg Biohub, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Steve","family":"Miller","sequence":"additional","affiliation":[{"name":"Department of Laboratory Medicine, University of California, San Francisco, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Joseph L.","family":"Derisi","sequence":"additional","affiliation":[{"name":"Chan Zuckerberg Biohub, San Francisco, California."},{"name":"Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Charles","family":"Langelier","sequence":"additional","affiliation":[{"name":"Chan Zuckerberg Biohub, San Francisco, California."},{"name":"Division of Infectious Diseases, Department of Medicine, University of California, San Francisco, San Francisco, California."}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"179","published-online":{"date-parts":[[2019,5,30]]},"reference":[{"key":"e_1_3_4_2_2","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/ciw691"},{"key":"e_1_3_4_3_2","doi-asserted-by":"publisher","DOI":"10.15585\/mmwr.mm6544e1"},{"key":"e_1_3_4_4_2","first-page":"43","article-title":"Genomic epidemiology of the UK outbreak of the emerging human fungal pathogen Candida auris","volume":"7","author":"Rhodes J.","year":"2018","unstructured":"Rhodes J., , Abdolrasouli A., , Farrer R.A, , Cuomo C.A, , Aanensen D.M, , Armstrong-James D., , Fisher M.C, , and Schelenz S.. 2018. Genomic epidemiology of the UK outbreak of the emerging human fungal pathogen Candida auris. Emerg. Microbes Infect. 7:43.","journal-title":"Emerg. Microbes Infect"},{"key":"e_1_3_4_5_2","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.02316-09"},{"key":"e_1_3_4_6_2","doi-asserted-by":"publisher","DOI":"10.1534\/g3.113.005967"},{"key":"e_1_3_4_7_2","doi-asserted-by":"publisher","DOI":"10.1038\/srep31900"},{"key":"e_1_3_4_8_2","first-page":"e000074","article-title":"NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats","volume":"2","author":"Roe C.","year":"2016","unstructured":"Roe C., , Smith D.E, , Williamson C.H.D, , Aziz M., , Keim P., , Hepp C.M, , Driebe E.M, , Lemmer D., , Travis J., , Hicks N.D, , Schupp J.M, , Wagner D.M, , Engelthaler D.M, , Gillece J.D, , Sahl J.W, , and Drees K.P.. 2016. NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats. Microb. Genomics, 2:e000074.","journal-title":"Microb. Genomics"},{"key":"e_1_3_4_9_2","unstructured":"Kozlov A. 2018. amkozlov\/raxml-ng: RAxML-NG v0.6.0 BETA (Version 0.6.0). Zenodo. http:\/\/doi.org\/10.5281\/zenodo.1291478."},{"key":"e_1_3_4_10_2","doi-asserted-by":"publisher","DOI":"10.1038\/nmeth.1923"},{"key":"e_1_3_4_11_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkx480"},{"key":"e_1_3_4_12_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1006290"}],"container-title":["Microbial Drug Resistance"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.sagepub.com\/doi\/full-xml\/10.1089\/mdr.2018.0408","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.sagepub.com\/doi\/pdf\/10.1089\/mdr.2018.0408","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.sagepub.com\/doi\/pdf\/10.1089\/mdr.2018.0408","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,5,1]],"date-time":"2026-05-01T20:34:32Z","timestamp":1777667672000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.sagepub.com\/doi\/10.1089\/mdr.2018.0408"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,5,30]]},"references-count":11,"journal-issue":{"issue":"5","published-print":{"date-parts":[[2019,6,1]]}},"alternative-id":["10.1089\/mdr.2018.0408"],"URL":"https:\/\/doi.org\/10.1089\/mdr.2018.0408","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/601559","asserted-by":"object"}]},"ISSN":["1076-6294","1931-8448"],"issn-type":[{"value":"1076-6294","type":"print"},{"value":"1931-8448","type":"electronic"}],"subject":[],"published":{"date-parts":[[2019,5,30]]}}}