{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,16]],"date-time":"2026-10-16T05:55:54Z","timestamp":1792130154410,"version":"4.4.0"},"reference-count":35,"publisher":"SAGE Publications","issue":"4","license":[{"start":{"date-parts":[[2025,4,1]],"date-time":"2025-04-01T00:00:00Z","timestamp":1743465600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.sagepub.com\/page\/policies\/text-and-data-mining-license"}],"content-domain":{"domain":["journals.sagepub.com"],"crossmark-restriction":true},"short-container-title":["Microbial Drug Resistance"],"published-print":{"date-parts":[[2025,4]]},"abstract":"<jats:p>\n                    <jats:italic toggle=\"yes\">Aeromonas dhakensis<\/jats:italic>\n                    is prevalent in aquatic environments in Taiwan and known for its notable antimicrobial resistance. However, comprehensive pan-genomic studies for this species in Taiwan are limited. This study analyzed 28 clinical\n                    <jats:italic toggle=\"yes\">A. dhakensis<\/jats:italic>\n                    isolates using single-molecule real-time sequencing technology, coupled with diverse databases, to elucidate the whole genomes. The focus was on phylogenetic relatedness, antimicrobial resistance genes, and mobile genetic elements. Genomic analysis and multilocus sequence typing were utilized to identify\n                    <jats:italic toggle=\"yes\">A. dhakensis<\/jats:italic>\n                    strains of heterogeneous origins. The detection of various \u03b2-lactamase genes (\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>cphA<\/jats:sub>\n                    ,\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>imiH<\/jats:sub>\n                    ,\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>AQU<\/jats:sub>\n                    ,\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>OXA<\/jats:sub>\n                    ,\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>TEM-1<\/jats:sub>\n                    ,\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>TRU-1<\/jats:sub>\n                    , and\n                    <jats:italic toggle=\"yes\">bla<\/jats:italic>\n                    <jats:sub>VEB<\/jats:sub>\n                    ) in clinical\n                    <jats:italic toggle=\"yes\">A. dhakensis<\/jats:italic>\n                    isolates raises concern, especially considering the use of carbapenems and third-generation cephalosporins in patients with severe infections. Notably, most\n                    <jats:italic toggle=\"yes\">A. dhakensis<\/jats:italic>\n                    strains carry chromosome-encoded \u03b2-lactamases, including AmpC, metallo-\u03b2-lactamase, and oxacillinase, and were susceptible to cefepime in drug susceptibility tests.\n                    <jats:italic toggle=\"yes\">A. dhakensis<\/jats:italic>\n                    strains were also susceptible to aminoglycosides, fluoroquinolones, tigecycline, and trimethoprim\/sulfamethoxazole. Three of the 28\n                    <jats:italic toggle=\"yes\">A. dhakensis<\/jats:italic>\n                    isolates carried plasmids containing an array of drug resistance genes, suggesting this species is likely a recipient or donor of drug resistance genes through horizontal gene transfer. Our findings provide valuable insights into the antimicrobial resistance of\n                    <jats:italic toggle=\"yes\">A. dhakensis<\/jats:italic>\n                    , highlighting the medical implications of its \u03b2-lactamase diversity and its potential role in the horizontal gene transfer of drug resistance genes.\n                  <\/jats:p>","DOI":"10.1089\/mdr.2024.0212","type":"journal-article","created":{"date-parts":[[2025,3,18]],"date-time":"2025-03-18T13:21:49Z","timestamp":1742304109000},"page":"97-106","update-policy":"https:\/\/doi.org\/10.1177\/sage-journals-update-policy","source":"Crossref","is-referenced-by-count":10,"title":["Comprehensive Genomic Analysis of Antimicrobial Resistance in\n                    <i>Aeromonas dhakensis<\/i>"],"prefix":"10.1177","volume":"31","author":[{"given":"Ying-Wen","family":"Chen","sequence":"first","affiliation":[{"name":"Department of Internal Medicine, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yu-Cheng","family":"Su","sequence":"additional","affiliation":[{"name":"Institute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wei-Yu","family":"Chen","sequence":"additional","affiliation":[{"name":"Department of Environmental Engineering, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jer-Horng","family":"Wu","sequence":"additional","affiliation":[{"name":"Department of Environmental Engineering, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jenn-Wei","family":"Chen","sequence":"additional","affiliation":[{"name":"Department of Microbiology and Immunology, College of Medicine, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shu-Li","family":"Su","sequence":"additional","affiliation":[{"name":"Department of Internal Medicine, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Chang-Shi","family":"Chen","sequence":"additional","affiliation":[{"name":"Department of Biochemistry and Molecular Biology, College of Medicine, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Pe-Fang","family":"Tsai","sequence":"additional","affiliation":[{"name":"Department of Pathology, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Wen-Chien","family":"Ko","sequence":"additional","affiliation":[{"name":"Department of Internal Medicine, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Po-Lin","family":"Chen","sequence":"additional","affiliation":[{"name":"Department of Internal Medicine, National Cheng Kung University Hospital, College of Medicine, National Cheng Kung University, Tainan, Taiwan."},{"name":"Department of Microbiology and Immunology, College of Medicine, National Cheng Kung University, Tainan, Taiwan."}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"179","published-online":{"date-parts":[[2025,4,11]]},"reference":[{"issue":"3","key":"e_1_3_7_2_2","doi-asserted-by":"crossref","first-page":"171","DOI":"10.1016\/j.syapm.2012.12.007","article-title":"Reclassification of Aeromonas hydrophila subsp. dhakensis Huys et al. 2002 and Aeromonas aquariorum Martinez-Murcia et al. 2008 as Aeromonas dhakensis sp. nov. comb nov. and emendation of the species Aeromonas hydrophila","volume":"36","author":"Beaz-Hidalgo R","year":"2013","unstructured":"Beaz-Hidalgo R, , Martinez-Murcia A, , Figueras MJ. Reclassification of Aeromonas hydrophila subsp. dhakensis Huys et al. 2002 and Aeromonas aquariorum Martinez-Murcia et al. 2008 as Aeromonas dhakensis sp. nov. comb nov. and emendation of the species Aeromonas hydrophila. Syst Appl Microbiol, 2013; 36(3):171\u2013176; doi: 10.1016\/j.syapm.2012.12.007","journal-title":"Syst Appl Microbiol"},{"issue":"6","key":"e_1_3_7_3_2","doi-asserted-by":"crossref","first-page":"398","DOI":"10.1016\/j.jmii.2012.08.008","article-title":"Complexity of beta-lactamases among clinical Aeromonas isolates and its clinical implications","volume":"45","author":"Chen PL","year":"2012","unstructured":"Chen PL, , Ko WC, , Wu CJ. Complexity of beta-lactamases among clinical Aeromonas isolates and its clinical implications. J Microbiol Immunol Infect, 2012; 45(6):398\u2013403; doi: 10.1016\/j.jmii.2012.08.008","journal-title":"J Microbiol Immunol Infect"},{"issue":"8","key":"e_1_3_7_4_2","article-title":"Aeromonas dhakensis: Clinical isolates with high carbapenem resistance","volume":"11","author":"Puah SM","year":"2022","unstructured":"Puah SM, , Khor WC, , Aung KT, et al. Aeromonas dhakensis: Clinical isolates with high carbapenem resistance. Pathogens, 2022; 11(8); doi: 10.3390\/pathogens11080833","journal-title":"Pathogens"},{"issue":"5","key":"e_1_3_7_5_2","doi-asserted-by":"crossref","DOI":"10.1128\/mSystems.00252-19","article-title":"Comprehensive analysis reveals the evolution and pathogenicity of aeromonas, viewed from both single isolated species and microbial communities","volume":"4","author":"Zhong C","year":"2019","unstructured":"Zhong C, , Han M, , Yang P, et al. 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