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Because traditional biological experiments are time-consuming and laborious, new calculation methods have recently been developed to predict associations between miRNA and diseases. In this review, we collected various miRNA\u2013disease association prediction models proposed in recent years and used two common data sets to evaluate the performance of the prediction models. First, we systematically summarized the commonly used databases and similarity data for predicting miRNA\u2013disease associations, and then divided the various calculation models into four categories for summary and detailed introduction. In this study, two independent datasets (D5430 and D6088) were compiled to systematically evaluate 11 publicly available prediction tools for miRNA\u2013disease associations. The experimental results indicate that the methods based on information dissemination and the method based on scoring function require shorter running time. The method based on matrix transformation often requires a longer running time, but the overall prediction result is better than the previous two methods. We hope that the summary of work related to miRNA and disease will provide comprehensive knowledge for predicting the relationship between miRNA and disease and contribute to advanced computation tools in the future.<\/jats:p>","DOI":"10.1093\/bib\/bbac066","type":"journal-article","created":{"date-parts":[[2022,2,9]],"date-time":"2022-02-09T12:11:01Z","timestamp":1644408661000},"source":"Crossref","is-referenced-by-count":20,"title":["Research progress of miRNA\u2013disease association prediction and comparison of related algorithms"],"prefix":"10.1093","volume":"23","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-8351-3332","authenticated-orcid":false,"given":"Liang","family":"Yu","sequence":"first","affiliation":[{"name":"School of Computer Science and Technology, Xidian University, Xi\u2019an, China"}]},{"given":"Yujia","family":"Zheng","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology, Xidian University, Xi\u2019an, China"}]},{"given":"Bingyi","family":"Ju","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology, Xidian University, Xi\u2019an, China"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3008-6357","authenticated-orcid":false,"given":"Chunyan","family":"Ao","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology, Xidian University, Xi\u2019an, China"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6396-0787","authenticated-orcid":false,"given":"Lin","family":"Gao","sequence":"additional","affiliation":[{"name":"School of Computer Science and Technology, Xidian University, Xi\u2019an, China"}]}],"member":"286","published-online":{"date-parts":[[2022,3,4]]},"reference":[{"key":"2022051813164531800_ref1","doi-asserted-by":"crossref","first-page":"350","DOI":"10.1038\/nature02871","article-title":"The functions of animal microRNAs","volume":"431","author":"Ambros","year":"2004","journal-title":"Nature"},{"key":"2022051813164531800_ref2","doi-asserted-by":"crossref","first-page":"9816","DOI":"10.1002\/jcp.27670","article-title":"miR-142-3p as tumor suppressor miRNA in the regulation of tumorigenicity, invasion and migration of human breast cancer by targeting Bach-1 expression","volume":"234","author":"Mansoori","year":"2019","journal-title":"J Cell Physiol"},{"key":"2022051813164531800_ref3","doi-asserted-by":"crossref","first-page":"1147","DOI":"10.1111\/odi.13068","article-title":"Effects of miRNA-342-3p in modulating Hedgehog signaling pathway of human umbilical cord mesenchymal stem cells by down-regulating Sufu","volume":"25","author":"Qing","year":"2019","journal-title":"Oral Dis"},{"key":"2022051813164531800_ref4","doi-asserted-by":"crossref","first-page":"68","DOI":"10.1016\/j.jff.2019.03.047","article-title":"MiRNA-320a is less expressed and miRNA-148a more expressed in preterm human milk compared to term human milk","volume":"57","author":"Shiff","year":"2019","journal-title":"J Funct Foods"},{"key":"2022051813164531800_ref5","doi-asserted-by":"crossref","first-page":"6223","DOI":"10.1002\/jcb.27910","article-title":"miRNA-206 regulates human pulmonary microvascular endothelial cell apoptosis via targeting in chronic obstructive pulmonary disease","volume":"120","author":"Sun","year":"2019","journal-title":"J Cell Biochem"},{"key":"2022051813164531800_ref6","doi-asserted-by":"crossref","first-page":"2026","DOI":"10.1016\/j.sjbs.2019.08.008","article-title":"miRNA-21 inhibition suppresses the human epithelial ovarian cancer by targeting PTEN signal pathway","volume":"26","author":"Hao","year":"2019","journal-title":"Saudi J Biol Sci"},{"key":"2022051813164531800_ref7","doi-asserted-by":"crossref","first-page":"S67","DOI":"10.1016\/j.spinee.2019.05.153","article-title":"139. 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