{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,8,21]],"date-time":"2026-08-21T12:34:34Z","timestamp":1787315674886,"version":"3.56.0"},"reference-count":68,"publisher":"Oxford University Press (OUP)","issue":"4","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Briefings in Bioinformatics"],"published-print":{"date-parts":[[2009,7,1]]},"DOI":"10.1093\/bib\/bbp026","type":"journal-article","created":{"date-parts":[[2009,5,29]],"date-time":"2009-05-29T21:09:30Z","timestamp":1243631370000},"page":"354-366","source":"Crossref","is-referenced-by-count":269,"title":["Genome assembly reborn: recent computational challenges"],"prefix":"10.1093","volume":"10","author":[{"given":"M.","family":"Pop","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2009,5,29]]},"reference":[{"issue":"12","key":"1_4429105","doi-asserted-by":"publisher","first-page":"5463","DOI":"10.1073\/pnas.74.12.5463","volume":"74","author":"Sanger","year":"1977","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"7218","key":"2_32561537","doi-asserted-by":"publisher","first-page":"60","DOI":"10.1038\/nature07484","volume":"456","author":"Wang","year":"2008","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"10","key":"3_29387679","doi-asserted-by":"publisher","first-page":"e254","DOI":"10.1371\/journal.pbio.0050254","volume":"5","author":"Levy","year":"2007","journal-title":"PLoS biology","ISSN":"https:\/\/id.crossref.org\/issn\/1544-9173","issn-type":"print"},{"issue":"7189","key":"4_30929683","doi-asserted-by":"publisher","first-page":"872","DOI":"10.1038\/nature06884","volume":"452","author":"Wheeler","year":"2008","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"5","key":"5_16779723","doi-asserted-by":"publisher","first-page":"410","DOI":"10.1101\/gr.7.5.410","volume":"7","author":"Green","year":"1997","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"3","key":"6_30603819","doi-asserted-by":"crossref","first-page":"256","DOI":"10.1038\/nbt0308-256c","volume":"26","author":"Mitchell","year":"2008","journal-title":"Nature biotechnology","ISSN":"https:\/\/id.crossref.org\/issn\/1087-0156","issn-type":"print"},{"issue":"7","key":"7_7892318","doi-asserted-by":"publisher","first-page":"2601","DOI":"10.1093\/nar\/6.7.2601","volume":"6","author":"Staden","year":"1979","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"5461","key":"8_6523241","doi-asserted-by":"publisher","first-page":"2196","DOI":"10.1126\/science.287.5461.2196","volume":"287","author":"Myers","year":"2000","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"1","key":"9_17470646","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1101\/gr.828403","volume":"13","author":"Jaffe","year":"2003","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"7190","key":"10_30959803","doi-asserted-by":"publisher","first-page":"991","DOI":"10.1038\/nature06856","volume":"452","author":"Ming","year":"2008","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"key":"11_34952692","doi-asserted-by":"crossref","first-page":"909","DOI":"10.1038\/nbt.1482","volume":"26","year":"2008","journal-title":"MELOIDOGYNE INCOGNITA NAT BIOTECHNOL"},{"issue":"3","key":"12_30280755","doi-asserted-by":"crossref","first-page":"142","DOI":"10.1016\/j.tig.2007.12.006","volume":"24","author":"Klipcan","year":"2008","journal-title":"Trends in genetics : TIG","ISSN":"https:\/\/id.crossref.org\/issn\/0168-9525","issn-type":"print"},{"issue":"3","key":"13_30563629","doi-asserted-by":"crossref","first-page":"133","DOI":"10.1016\/j.tig.2007.12.007","volume":"24","author":"Mardis","year":"2008","journal-title":"Trends in genetics : TIG","ISSN":"https:\/\/id.crossref.org\/issn\/0168-9525","issn-type":"print"},{"issue":"3","key":"14_4968223","doi-asserted-by":"publisher","first-page":"231","DOI":"10.1016\/0888-7543(88)90007-9","volume":"2","author":"Lander","year":"1988","journal-title":"Genomics","ISSN":"https:\/\/id.crossref.org\/issn\/0888-7543","issn-type":"print"},{"issue":"7057","key":"15_19407299","doi-asserted-by":"crossref","first-page":"376","DOI":"10.1038\/nature03959","volume":"437","author":"Margulies","year":"2005","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"5872","key":"16_30742143","doi-asserted-by":"publisher","first-page":"106","DOI":"10.1126\/science.1150427","volume":"320","author":"Harris","year":"2008","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"5904","key":"17_32604881","doi-asserted-by":"publisher","first-page":"1110","DOI":"10.1126\/science.1165340","volume":"322","author":"Zehr","year":"2008","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"3","key":"18_5945652","doi-asserted-by":"crossref","first-page":"186","DOI":"10.1101\/gr.8.3.186","volume":"8","author":"Ewing","year":"1998","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"3","key":"19_5945651","doi-asserted-by":"crossref","first-page":"175","DOI":"10.1101\/gr.8.3.175","volume":"8","author":"Ewing","year":"1998","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"key":"20_34952693","doi-asserted-by":"crossref","first-page":"275","DOI":"10.1089\/cmb.1995.2.275","volume":"2","year":"1995","journal-title":"J COMP BIO"},{"issue":"1","key":"23_32935126","doi-asserted-by":"publisher","first-page":"103","DOI":"10.1111\/j.1574-6968.2008.01441.x","volume":"291","author":"Farrer","year":"2009","journal-title":"FEMS Microbiology Letters","ISSN":"https:\/\/id.crossref.org\/issn\/1574-6968","issn-type":"print"},{"issue":"2","key":"24_32638914","doi-asserted-by":"publisher","first-page":"294","DOI":"10.1101\/gr.083311.108","volume":"19","year":"2009","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"21","key":"25_29477763","doi-asserted-by":"publisher","first-page":"2942","DOI":"10.1093\/bioinformatics\/btm451","volume":"23","year":"2007","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"11","key":"26_29519059","doi-asserted-by":"publisher","first-page":"1697","DOI":"10.1101\/gr.6435207","volume":"17","year":"2007","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"1","key":"27_10026674","doi-asserted-by":"publisher","first-page":"89","DOI":"10.1016\/S0888-7543(05)80288-5","volume":"14","author":"Churchill","year":"1992","journal-title":"Genomics","ISSN":"https:\/\/id.crossref.org\/issn\/0888-7543","issn-type":"print"},{"key":"28_34952694","first-page":"80209","volume":"18","year":"2008","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"1","key":"29_11465346","doi-asserted-by":"publisher","first-page":"177","DOI":"10.1101\/gr.208902","volume":"12","author":"Batzoglou","year":"2002","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"5830","key":"30_28787857","doi-asserted-by":"publisher","first-page":"1497","DOI":"10.1126\/science.1141319","volume":"316","year":"2007","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"7","key":"31_31403652","doi-asserted-by":"publisher","first-page":"621","DOI":"10.1038\/nmeth.1226","volume":"5","author":"Mortazavi","year":"2008","ISSN":"https:\/\/id.crossref.org\/issn\/1548-7091","issn-type":"print"},{"key":"32_23705008","doi-asserted-by":"publisher","first-page":"64","DOI":"10.1186\/1471-2105-8-64","volume":"8","author":"Sommer","year":"2007","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"issue":"suppl_2","key":"33_19448879","doi-asserted-by":"publisher","first-page":"ii79","DOI":"10.1093\/bioinformatics\/bti1114","volume":"21","author":"Myers","year":"2005","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"key":"35_34952695","doi-asserted-by":"crossref","first-page":"291","DOI":"10.1089\/cmb.1995.2.291","volume":"2","year":"1995","journal-title":"J COMP BIO"},{"issue":"17","key":"36_11279851","doi-asserted-by":"publisher","first-page":"9748","DOI":"10.1073\/pnas.171285098","volume":"98","author":"Pevzner","year":"2001","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"90001","key":"37_11252100","doi-asserted-by":"crossref","first-page":"S225","DOI":"10.1093\/bioinformatics\/17.suppl_1.S225","volume":"17","author":"Pevzner","year":"2001","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"key":"38_34952696","first-page":"206774","volume":"20","year":"2004","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"key":"39_34952697","first-page":"324","volume":"18","year":"2007","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"2","key":"40_32756438","doi-asserted-by":"publisher","first-page":"336","DOI":"10.1101\/gr.079053.108","volume":"19","year":"2009","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"5","key":"41_30650833","doi-asserted-by":"publisher","first-page":"821","DOI":"10.1101\/gr.074492.107","volume":"18","year":"2008","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"5","key":"42_30630013","doi-asserted-by":"publisher","first-page":"810","DOI":"10.1101\/gr.7337908","volume":"18","year":"2008","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"1","key":"44_17982874","doi-asserted-by":"publisher","first-page":"149","DOI":"10.1101\/gr.1536204","volume":"14","author":"Pop","year":"2004","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"1","key":"45_16353669","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1101\/gr.5.1.1","volume":"5","author":"Samad","year":"1995","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"10","key":"46_30674507","doi-asserted-by":"publisher","first-page":"1229","DOI":"10.1093\/bioinformatics\/btn102","volume":"24","year":"2008","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"3","key":"47_18444208","doi-asserted-by":"publisher","first-page":"237","DOI":"10.1093\/bib\/5.3.237","volume":"5","author":"Pop","year":"2004","journal-title":"Briefings in Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1467-5463","issn-type":"print"},{"issue":"11","key":"48_31738833","doi-asserted-by":"publisher","first-page":"1851","DOI":"10.1101\/gr.078212.108","volume":"18","year":"2008","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"9","key":"49_32034952","doi-asserted-by":"publisher","first-page":"e1000186","DOI":"10.1371\/journal.pcbi.1000186","volume":"4","author":"Salzberg","year":"2008","ISSN":"https:\/\/id.crossref.org\/issn\/1553-734X","issn-type":"print"},{"issue":"9","key":"50_10986385","doi-asserted-by":"publisher","first-page":"868","DOI":"10.1101\/gr.9.9.868","volume":"9","author":"Huang","year":"1999","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"3","key":"52_16993333","doi-asserted-by":"publisher","first-page":"379","DOI":"10.1093\/bioinformatics\/18.3.379","volume":"18","author":"Tammi","year":"2002","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"key":"53_21812589","doi-asserted-by":"publisher","first-page":"155","DOI":"10.1186\/1471-2105-7-155","volume":"7","author":"Arner","year":"2006","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"key":"54_34952698","doi-asserted-by":"crossref","first-page":"54","DOI":"10.1109\/TCBB.2007.1005","volume":"4","year":"2007","journal-title":"IEEEACM TRANS COMPUT BIOL BIOINFORM"},{"issue":"5","key":"55_18919473","doi-asserted-by":"publisher","first-page":"497","DOI":"10.1089\/cmb.2005.12.497","volume":"12","author":"Dew","year":"2005","journal-title":"Journal of computational biology : a journal of computational molecular cell biology","ISSN":"https:\/\/id.crossref.org\/issn\/1066-5277","issn-type":"print"},{"issue":"1","key":"56_29969279","doi-asserted-by":"publisher","first-page":"42","DOI":"10.1093\/bioinformatics\/btm542","volume":"24","year":"2008","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"3","key":"57_5945653","doi-asserted-by":"crossref","first-page":"195","DOI":"10.1101\/gr.8.3.195","volume":"8","author":"Gordon","year":"1998","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"7","key":"58_18755644","doi-asserted-by":"publisher","first-page":"853","DOI":"10.1093\/bioinformatics\/bti091","volume":"21","year":"2005","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"3","key":"59_27928180","doi-asserted-by":"publisher","first-page":"R34","DOI":"10.1186\/gb-2007-8-3-r34","volume":"8","author":"Schatz","year":"2007","journal-title":"Genome biology","ISSN":"https:\/\/id.crossref.org\/issn\/1465-6906","issn-type":"print"},{"issue":"5507","key":"60_11044188","doi-asserted-by":"publisher","first-page":"1304","DOI":"10.1126\/science.1058040","volume":"291","author":"Venter","year":"2001","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"3","key":"61_6392025","doi-asserted-by":"publisher","first-page":"309","DOI":"10.1038\/15484","volume":"23","author":"Lai","year":"1999","journal-title":"Nature genetics","ISSN":"https:\/\/id.crossref.org\/issn\/1061-4036","issn-type":"print"},{"issue":"3","key":"62_30658502","doi-asserted-by":"publisher","first-page":"R55","DOI":"10.1186\/gb-2008-9-3-r55","volume":"9","author":"Phillippy","year":"2008","journal-title":"Genome biology","ISSN":"https:\/\/id.crossref.org\/issn\/1465-6906","issn-type":"print"},{"issue":"6","key":"63_30304453","doi-asserted-by":"publisher","first-page":"744","DOI":"10.1093\/bioinformatics\/btm608","volume":"24","year":"2008","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"30","key":"64_22376717","doi-asserted-by":"publisher","first-page":"11240","DOI":"10.1073\/pnas.0604351103","volume":"103","year":"2006","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"5","key":"65_28796626","doi-asserted-by":"publisher","first-page":"e484","DOI":"10.1371\/journal.pone.0000484","volume":"2","author":"Sundquist","year":"2007","ISSN":"https:\/\/id.crossref.org\/issn\/1932-6203","issn-type":"print"},{"issue":"5667","key":"66_18125245","doi-asserted-by":"publisher","first-page":"66","DOI":"10.1126\/science.1093857","volume":"304","year":"2004","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"7","key":"67_31599993","doi-asserted-by":"publisher","first-page":"e177","DOI":"10.1371\/journal.pbio.0060177","volume":"6","author":"Simmons","year":"2008","journal-title":"PLoS biology","ISSN":"https:\/\/id.crossref.org\/issn\/1544-9173","issn-type":"print"},{"issue":"8","key":"68_19305839","doi-asserted-by":"publisher","first-page":"1127","DOI":"10.1101\/gr.3722605","volume":"15","author":"Vinson","year":"2005","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"6978","key":"69_18070482","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1038\/nature02340","volume":"428","author":"Tyson","year":"2004","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"5778","key":"70_22205791","doi-asserted-by":"publisher","first-page":"1355","DOI":"10.1126\/science.1124234","volume":"312","author":"Gill","year":"2006","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"3","key":"71_27939026","doi-asserted-by":"publisher","first-page":"e77","DOI":"10.1371\/journal.pbio.0050077","volume":"5","author":"Rusch","year":"2007","journal-title":"PLoS biology","ISSN":"https:\/\/id.crossref.org\/issn\/1544-9173","issn-type":"print"},{"key":"72_29741697","doi-asserted-by":"publisher","first-page":"398","DOI":"10.1186\/1471-2105-8-398","volume":"8","author":"Eppley","year":"2007","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"issue":"6","key":"73_28889842","doi-asserted-by":"publisher","first-page":"495","DOI":"10.1038\/nmeth1043","volume":"4","author":"Mavromatis","year":"2007","ISSN":"https:\/\/id.crossref.org\/issn\/1548-7091","issn-type":"print"}],"container-title":["Briefings in Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/bib\/article-pdf\/10\/4\/354\/847444\/bbp026.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,2,20]],"date-time":"2019-02-20T16:22:34Z","timestamp":1550679754000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bib\/article-lookup\/doi\/10.1093\/bib\/bbp026"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2009,5,29]]},"references-count":68,"journal-issue":{"issue":"4","published-online":{"date-parts":[[2009,6,7]]},"published-print":{"date-parts":[[2009,7,1]]}},"URL":"https:\/\/doi.org\/10.1093\/bib\/bbp026","relation":{},"ISSN":["1467-5463","1477-4054"],"issn-type":[{"value":"1467-5463","type":"print"},{"value":"1477-4054","type":"electronic"}],"subject":[],"published":{"date-parts":[[2009,5,29]]}}}