{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,13]],"date-time":"2026-01-13T04:47:15Z","timestamp":1768279635608,"version":"3.49.0"},"reference-count":118,"publisher":"Oxford University Press (OUP)","issue":"6","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Briefings in Bioinformatics"],"published-print":{"date-parts":[[2012,11,1]]},"DOI":"10.1093\/bib\/bbs002","type":"journal-article","created":{"date-parts":[[2012,3,25]],"date-time":"2012-03-25T00:46:29Z","timestamp":1332636389000},"page":"751-768","source":"Crossref","is-referenced-by-count":18,"title":["Data mining the human gut microbiota for therapeutic targets"],"prefix":"10.1093","volume":"13","author":[{"given":"M.","family":"Collison","sequence":"first","affiliation":[]},{"given":"R. P.","family":"Hirt","sequence":"additional","affiliation":[]},{"given":"A.","family":"Wipat","sequence":"additional","affiliation":[]},{"given":"S.","family":"Nakjang","sequence":"additional","affiliation":[]},{"given":"P.","family":"Sanseau","sequence":"additional","affiliation":[]},{"given":"J. R.","family":"Brown","sequence":"additional","affiliation":[]}],"member":"286","published-online":{"date-parts":[[2012,3,24]]},"reference":[{"issue":"2","key":"1_40392519","doi-asserted-by":"publisher","first-page":"497","DOI":"10.1378\/chest.11-0774","volume":"140","author":"Kiley","year":"2011","journal-title":"Chest","ISSN":"https:\/\/id.crossref.org\/issn\/0012-3692","issn-type":"print"},{"key":"2_40538640","doi-asserted-by":"publisher","first-page":"48","DOI":"10.1111\/j.1749-6632.2011.06041.x","volume":"1230","author":"Danielsson","year":"2011","journal-title":"Annals of the New York Academy of Sciences","ISSN":"https:\/\/id.crossref.org\/issn\/0077-8923","issn-type":"print"},{"issue":"3","key":"3_37701530","doi-asserted-by":"publisher","first-page":"859","DOI":"10.1152\/physrev.00045.2009","volume":"90","author":"Sekirov","year":"2010","journal-title":"Physiological Reviews","ISSN":"https:\/\/id.crossref.org\/issn\/0031-9333","issn-type":"print"},{"issue":"4","key":"4_39490927","doi-asserted-by":"publisher","first-page":"244","DOI":"10.1038\/nrmicro2537","volume":"9","author":"Grice","year":"2011","journal-title":"Nature reviews. Microbiology","ISSN":"https:\/\/id.crossref.org\/issn\/1740-1526","issn-type":"print"},{"issue":"4","key":"5_21670731","doi-asserted-by":"publisher","first-page":"837","DOI":"10.1016\/j.cell.2006.02.017","volume":"124","author":"Ley","year":"2006","journal-title":"Cell","ISSN":"https:\/\/id.crossref.org\/issn\/0092-8674","issn-type":"print"},{"key":"6_4362172","doi-asserted-by":"publisher","first-page":"107","DOI":"10.1146\/annurev.mi.31.100177.000543","volume":"31","author":"Savage","year":"1977","journal-title":"Annual review of microbiology","ISSN":"https:\/\/id.crossref.org\/issn\/0066-4227","issn-type":"print"},{"issue":"7285","key":"7_36747651","doi-asserted-by":"publisher","first-page":"59","DOI":"10.1038\/nature08821","volume":"464","author":"Qin","year":"2010","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"5981","key":"8_37316496","doi-asserted-by":"publisher","first-page":"994","DOI":"10.1126\/science.1183605","volume":"328","author":"The Human Microbiome Jumpstart Reference Strains C","year":"2010","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"5-6","key":"10_39150056","doi-asserted-by":"publisher","first-page":"229","DOI":"10.1016\/j.drudis.2011.01.008","volume":"16","author":"Brown","year":"2011","journal-title":"Drug discovery today","ISSN":"https:\/\/id.crossref.org\/issn\/1359-6446","issn-type":"print"},{"issue":"12","key":"11_6035101","doi-asserted-by":"publisher","first-page":"6578","DOI":"10.1073\/pnas.95.12.6578","volume":"95","author":"Whitman","year":"1998","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"10","key":"12_34103662","doi-asserted-by":"publisher","first-page":"3698","DOI":"10.1073\/pnas.0812874106","volume":"106","year":"2009","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"3","key":"13_37701530","doi-asserted-by":"crossref","first-page":"859","DOI":"10.1152\/physrev.00045.2009","volume":"90","year":"2010","journal-title":"Physiological Reviews","ISSN":"https:\/\/id.crossref.org\/issn\/0031-9333","issn-type":"print"},{"issue":"7","key":"14_22353721","doi-asserted-by":"publisher","first-page":"688","DOI":"10.1038\/sj.embor.7400731","volume":"7","author":"O'hara","year":"2006","journal-title":"EMBO Reports","ISSN":"https:\/\/id.crossref.org\/issn\/1469-221X","issn-type":"print"},{"key":"15_41492890","doi-asserted-by":"crossref","first-page":"279","DOI":"10.1038\/nrmicro2540","volume":"9","year":"2011","journal-title":"NAT REV MICRO"},{"issue":"5","key":"16_37355770","doi-asserted-by":"publisher","first-page":"e10667","DOI":"10.1371\/journal.pone.0010667","volume":"5","author":"Biagi","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1932-6203","issn-type":"print"},{"issue":"6052","key":"17_40667087","doi-asserted-by":"publisher","first-page":"105","DOI":"10.1126\/science.1208344","volume":"334","year":"2011","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"7228","key":"18_32755789","doi-asserted-by":"publisher","first-page":"480","DOI":"10.1038\/nature07540","volume":"457","author":"Turnbaugh","year":"2009","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"7346","key":"19_39778321","doi-asserted-by":"publisher","first-page":"174","DOI":"10.1038\/nature09944","volume":"473","author":"Arumugam","year":"2011","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"33","key":"20_37635620","doi-asserted-by":"publisher","first-page":"14691","DOI":"10.1073\/pnas.1005963107","volume":"107","year":"2010","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"26","key":"21_37419904","doi-asserted-by":"publisher","first-page":"11971","DOI":"10.1073\/pnas.1002601107","volume":"107","year":"2010","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"7290","key":"22_37066899","doi-asserted-by":"publisher","first-page":"908","DOI":"10.1038\/nature08937","volume":"464","author":"Hehemann","year":"2010","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"3","key":"23_36698150","doi-asserted-by":"publisher","first-page":"159","DOI":"10.1038\/nri2710","volume":"10","author":"Hooper","year":"2010","journal-title":"Nature reviews. Immunology","ISSN":"https:\/\/id.crossref.org\/issn\/1474-1733","issn-type":"print"},{"issue":"Supplement_1","key":"24_38085474","doi-asserted-by":"publisher","first-page":"4607","DOI":"10.1073\/pnas.1000092107","volume":"108","year":"2011","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"6","key":"25_39826584","doi-asserted-by":"publisher","first-page":"1729","DOI":"10.1053\/j.gastro.2011.02.012","volume":"140","author":"Abraham","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1528-0012","issn-type":"print"},{"issue":"4","key":"26_39257153","doi-asserted-by":"publisher","first-page":"213","DOI":"10.4161\/gmic.1.4.12520","volume":"1","author":"Willing","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1949-0984","issn-type":"print"},{"issue":"5","key":"27_34519635","doi-asserted-by":"publisher","first-page":"313","DOI":"10.1038\/nri2515","volume":"9","author":"Round","year":"2009","journal-title":"Nature reviews. Immunology","ISSN":"https:\/\/id.crossref.org\/issn\/1474-1733","issn-type":"print"},{"issue":"6","key":"28_39826584","first-page":"1729","volume":"140","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1528-0012","issn-type":"print"},{"issue":"3","key":"29_29049204","doi-asserted-by":"publisher","first-page":"652","DOI":"10.1016\/j.mehy.2007.01.027","volume":"69","author":"Boorom","year":"2007","journal-title":"Medical hypotheses","ISSN":"https:\/\/id.crossref.org\/issn\/0306-9877","issn-type":"print"},{"key":"30_36469201","doi-asserted-by":"publisher","first-page":"157","DOI":"10.1007\/978-1-4419-1601-3_12","volume":"666","author":"Elliott","year":"2009","journal-title":"Advances in experimental medicine and biology","ISSN":"https:\/\/id.crossref.org\/issn\/0065-2598","issn-type":"print"},{"issue":"1","key":"31_31662963","doi-asserted-by":"publisher","first-page":"128","DOI":"10.1002\/ibd.20633","volume":"15","author":"Weinstock","year":"2009","journal-title":"Inflammatory bowel diseases","ISSN":"https:\/\/id.crossref.org\/issn\/1078-0998","issn-type":"print"},{"issue":"7122","key":"33_23443236","doi-asserted-by":"publisher","first-page":"1022","DOI":"10.1038\/4441022a","volume":"444","author":"Ley","year":"2006","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"33","key":"34_22458433","doi-asserted-by":"publisher","first-page":"12511","DOI":"10.1073\/pnas.0601056103","volume":"103","year":"2006","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"5","key":"35_40321771","doi-asserted-by":"publisher","first-page":"1782","DOI":"10.1053\/j.gastro.2011.06.072","volume":"141","author":"Saulnier","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1528-0012","issn-type":"print"},{"issue":"1","key":"36_38127342","doi-asserted-by":"publisher","first-page":"179","DOI":"10.1002\/ibd.21339","volume":"17","author":"Frank","year":"2011","journal-title":"Inflammatory bowel diseases","ISSN":"https:\/\/id.crossref.org\/issn\/1078-0998","issn-type":"print"},{"issue":"7122","key":"37_23443239","doi-asserted-by":"publisher","first-page":"1027","DOI":"10.1038\/nature05414","volume":"444","author":"Turnbaugh","year":"2006","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"2","key":"38_39174838","doi-asserted-by":"publisher","first-page":"202","DOI":"10.1016\/j.pharmthera.2011.01.012","volume":"130","author":"Cani","year":"2011","journal-title":"Pharmacology &amp; therapeutics","ISSN":"https:\/\/id.crossref.org\/issn\/0163-7258","issn-type":"print"},{"issue":"2","key":"39_36647808","doi-asserted-by":"publisher","first-page":"e9074","DOI":"10.1371\/journal.pone.0009074","volume":"5","author":"Thuny","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1932-6203","issn-type":"print"},{"issue":"12","key":"40_40766149","doi-asserted-by":"publisher","first-page":"2133","DOI":"10.1038\/ajg.2011.304","volume":"106","author":"Shaw","year":"2011","journal-title":"The American journal of gastroenterology","ISSN":"https:\/\/id.crossref.org\/issn\/0002-9270","issn-type":"print"},{"issue":"1","key":"41_38353830","doi-asserted-by":"publisher","first-page":"49","DOI":"10.1136\/gut.2010.219683","volume":"60","year":"2011","journal-title":"Gut","ISSN":"https:\/\/id.crossref.org\/issn\/0017-5749","issn-type":"print"},{"issue":"40","key":"42_35603043","doi-asserted-by":"publisher","first-page":"17187","DOI":"10.1073\/pnas.0904847106","volume":"106","year":"2009","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"5","key":"43_40088198","doi-asserted-by":"publisher","first-page":"e20447","DOI":"10.1371\/journal.pone.0020447","volume":"6","author":"Marchesi","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1932-6203","issn-type":"print"},{"issue":"7351","key":"44_40155702","doi-asserted-by":"publisher","first-page":"327","DOI":"10.1038\/nature10213","volume":"474","author":"Kau","year":"2011","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"5","key":"45_39533302","doi-asserted-by":"publisher","first-page":"1097","DOI":"10.1016\/j.jaci.2011.02.012","volume":"127","author":"McLoughlin","year":"2011","journal-title":"Journal of Allergy and Clinical Immunology","ISSN":"https:\/\/id.crossref.org\/issn\/1097-6825","issn-type":"print"},{"issue":"8","key":"46_40287163","doi-asserted-by":"publisher","first-page":"574","DOI":"10.1002\/bies.201100024","volume":"33","author":"Lyte","year":"2011","journal-title":"BioEssays : news and reviews in molecular, cellular and developmental biology","ISSN":"https:\/\/id.crossref.org\/issn\/0265-9247","issn-type":"print"},{"issue":"9","key":"47_17223174","doi-asserted-by":"publisher","first-page":"727","DOI":"10.1038\/nrd892","volume":"1","author":"Hopkins","year":"2002","journal-title":"Nature reviews. Drug discovery","ISSN":"https:\/\/id.crossref.org\/issn\/1474-1776","issn-type":"print"},{"key":"48_42221861","doi-asserted-by":"crossref","first-page":"695","DOI":"10.1007\/s00894-008-0353-5","volume":"15","year":"2009","journal-title":"J MOL MODEL"},{"issue":"1-2","key":"49_31670543","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.ijpharm.2008.07.009","volume":"363","author":"Sousa","year":"2008","journal-title":"International Journal of Pharmaceutics","ISSN":"https:\/\/id.crossref.org\/issn\/1873-3476","issn-type":"print"},{"issue":"2","key":"50_6222822","doi-asserted-by":"crossref","first-page":"791","DOI":"10.1016\/S0022-3565(24)37858-9","volume":"287","author":"Okuda","year":"1998","journal-title":"Journal of Pharmacology and Experimental Therapeutics","ISSN":"https:\/\/id.crossref.org\/issn\/0022-3565","issn-type":"print"},{"issue":"6005","key":"51_38482441","doi-asserted-by":"publisher","first-page":"831","DOI":"10.1126\/science.1191175","volume":"330","author":"Wallace","year":"2010","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"10","key":"52_41077927","doi-asserted-by":"publisher","first-page":"e25482","DOI":"10.1371\/journal.pone.0025482","volume":"6","author":"Kaddurah-Daouk","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1932-6203","issn-type":"print"},{"issue":"1","key":"53_38921932","doi-asserted-by":"publisher","first-page":"103","DOI":"10.2217\/pgs.10.157","volume":"12","author":"Nicholson","year":"2011","journal-title":"Pharmacogenomics","ISSN":"https:\/\/id.crossref.org\/issn\/1462-2416","issn-type":"print"},{"issue":"34","key":"54_35421186","doi-asserted-by":"publisher","first-page":"14187","DOI":"10.1073\/pnas.0907721106","volume":"106","year":"2009","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"6","key":"55_34914724","doi-asserted-by":"publisher","first-page":"2015","DOI":"10.1053\/j.gastro.2009.01.072","volume":"136","year":"2009","ISSN":"https:\/\/id.crossref.org\/issn\/1528-0012","issn-type":"print"},{"issue":"6","key":"56_38786623","doi-asserted-by":"publisher","first-page":"1808","DOI":"10.1053\/j.gastro.2010.10.025","volume":"139","author":"Shanahan","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1528-0012","issn-type":"print"},{"issue":"6","key":"57_41020477","doi-asserted-by":"publisher","first-page":"593","DOI":"10.1016\/j.coph.2011.09.010","volume":"11","author":"Quigley","year":"2011","journal-title":"Current opinion in pharmacology","ISSN":"https:\/\/id.crossref.org\/issn\/1471-4892","issn-type":"print"},{"issue":"7610","key":"58_28962568","doi-asserted-by":"publisher","first-page":"80","DOI":"10.1136\/bmj.39231.599815.55","volume":"335","year":"2007","journal-title":"BMJ","ISSN":"https:\/\/id.crossref.org\/issn\/0959-8138","issn-type":"print"},{"issue":"11","key":"59_29621934","doi-asserted-by":"crossref","first-page":"2420","DOI":"10.1093\/jn\/137.11.2420","volume":"137","author":"Arslanoglu","year":"2007","journal-title":"The Journal of Nutrition","ISSN":"https:\/\/id.crossref.org\/issn\/0022-3166","issn-type":"print"},{"issue":"10","key":"60_41126147","doi-asserted-by":"publisher","first-page":"e26507","DOI":"10.1371\/journal.pone.0026507","volume":"6","author":"Bailey","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1932-6203","issn-type":"print"},{"issue":"1","key":"61_31662963","doi-asserted-by":"crossref","first-page":"128","DOI":"10.1002\/ibd.20633","volume":"15","year":"2009","journal-title":"Inflammatory bowel diseases","ISSN":"https:\/\/id.crossref.org\/issn\/1078-0998","issn-type":"print"},{"issue":"4","key":"62_40174411","doi-asserted-by":"publisher","first-page":"409","DOI":"10.1111\/j.1365-2036.2011.04737.x","volume":"34","author":"Landy","year":"2011","journal-title":"Alimentary pharmacology &amp; therapeutics","ISSN":"https:\/\/id.crossref.org\/issn\/0269-2813","issn-type":"print"},{"issue":"11","key":"63_32687088","doi-asserted-by":"publisher","first-page":"e280","DOI":"10.1371\/journal.pbio.0060280","volume":"6","author":"Dethlefsen","year":"2008","journal-title":"PLoS biology","ISSN":"https:\/\/id.crossref.org\/issn\/1544-9173","issn-type":"print"},{"issue":"7361","key":"64_40641593","doi-asserted-by":"publisher","first-page":"393","DOI":"10.1038\/476393a","volume":"476","author":"Blaser","year":"2011","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"3","key":"65_39150728","doi-asserted-by":"publisher","first-page":"213","DOI":"10.1038\/cmi.2010.77","volume":"8","author":"Proal","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1672-7681","issn-type":"print"},{"key":"66_42221862","first-page":"112","volume":"14","year":"2011","journal-title":"Diabetes, obesity &amp; metabolism","ISSN":"https:\/\/id.crossref.org\/issn\/1462-8902","issn-type":"print"},{"issue":"1","key":"67_23461865","doi-asserted-by":"publisher","first-page":"29","DOI":"10.1038\/nrd2201","volume":"6","author":"Payne","year":"2007","journal-title":"Nature reviews. Drug discovery","ISSN":"https:\/\/id.crossref.org\/issn\/1474-1776","issn-type":"print"},{"issue":"5728","key":"68_18914393","doi-asserted-by":"publisher","first-page":"1635","DOI":"10.1126\/science.1110591","volume":"308","year":"2005","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"5","key":"69_40384409","doi-asserted-by":"publisher","first-page":"1425","DOI":"10.1007\/s00253-011-3462-5","volume":"91","author":"Feria-Gervasio","year":"2011","journal-title":"Applied Microbiology and Biotechnology","ISSN":"https:\/\/id.crossref.org\/issn\/1432-0614","issn-type":"print"},{"issue":"6","key":"70_37428821","doi-asserted-by":"publisher","first-page":"e1000798","DOI":"10.1371\/journal.pcbi.1000798","volume":"6","author":"Ellrott","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1553-734X","issn-type":"print"},{"issue":"1","key":"71_30725576","doi-asserted-by":"publisher","first-page":"109","DOI":"10.1016\/j.cbpa.2008.01.015","volume":"12","author":"Zaneveld","year":"2008","journal-title":"Current opinion in chemical biology","ISSN":"https:\/\/id.crossref.org\/issn\/1367-5931","issn-type":"print"},{"issue":"1","key":"72_38868566","doi-asserted-by":"crossref","first-page":"9","DOI":"10.1038\/nri2891","volume":"11","author":"Saleh","year":"2011","journal-title":"Nature reviews. Immunology","ISSN":"https:\/\/id.crossref.org\/issn\/1474-1733","issn-type":"print"},{"issue":"1","key":"73_32227468","doi-asserted-by":"publisher","first-page":"95","DOI":"10.1093\/bmb\/ldn038","volume":"88","year":"2008","journal-title":"British Medical Bulletin","ISSN":"https:\/\/id.crossref.org\/issn\/0007-1420","issn-type":"print"},{"issue":"6","key":"74_40039341","doi-asserted-by":"publisher","first-page":"490","DOI":"10.1016\/j.anaerobe.2011.05.009","volume":"17","author":"Shenderov","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8274","issn-type":"print"},{"issue":"12","key":"75_35731688","doi-asserted-by":"publisher","first-page":"2317","DOI":"10.1101\/gr.096651.109","volume":"19","year":"2009","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"key":"76_28599949","doi-asserted-by":"crossref","first-page":"S274","DOI":"10.1093\/cid\/10.Supplement_2.S274","volume":"10","year":"1988","journal-title":"Reviews of infectious diseases","ISSN":"https:\/\/id.crossref.org\/issn\/0162-0886","issn-type":"print"},{"issue":"5","key":"77_37096338","doi-asserted-by":"publisher","first-page":"335","DOI":"10.1038\/nmeth.f.303","volume":"7","author":"Caporaso","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1548-7091","issn-type":"print"},{"key":"78_32006915","doi-asserted-by":"publisher","first-page":"386","DOI":"10.1186\/1471-2105-9-386","volume":"9","author":"Meyer","year":"2008","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"issue":"7","key":"79_34626333","doi-asserted-by":"publisher","first-page":"1141","DOI":"10.1101\/gr.085464.108","volume":"19","year":"2009","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"key":"80_34224285","doi-asserted-by":"publisher","first-page":"50","DOI":"10.1186\/1471-2180-9-50","volume":"9","author":"O'Sullivan","year":"2009","journal-title":"BMC Microbiology","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2180","issn-type":"print"},{"key":"81_31210803","doi-asserted-by":"publisher","first-page":"247","DOI":"10.1186\/1471-2164-9-247","volume":"9","author":"Lee","year":"2008","journal-title":"BMC genomics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2164","issn-type":"print"},{"issue":"5","key":"82_32591030","doi-asserted-by":"publisher","first-page":"447","DOI":"10.1016\/j.chom.2008.09.007","volume":"4","author":"Martens","year":"2008","ISSN":"https:\/\/id.crossref.org\/issn\/1934-6069","issn-type":"print"},{"issue":"18","key":"83_6147611","doi-asserted-by":"crossref","first-page":"4765","DOI":"10.1128\/JB.180.18.4765-4774.1998","volume":"180","author":"Hugenholtz","year":"1998","journal-title":"Journal of Bacteriology","ISSN":"https:\/\/id.crossref.org\/issn\/0021-9193","issn-type":"print"},{"issue":"1","key":"84_15829920","first-page":"143","volume":"59","author":"Amann","year":"1995","journal-title":"Microbiology and Molecular Biology Reviews","ISSN":"https:\/\/id.crossref.org\/issn\/1092-2172","issn-type":"print"},{"key":"85_37790045","doi-asserted-by":"publisher","first-page":"206","DOI":"10.1186\/1471-2180-10-206","volume":"10","author":"Wu","year":"2010","journal-title":"BMC Microbiology","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2180","issn-type":"print"},{"issue":"8","key":"86_40764793","doi-asserted-by":"publisher","first-page":"e23214","DOI":"10.1371\/journal.pone.0023214","volume":"6","author":"Kembel","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1932-6203","issn-type":"print"},{"issue":"1","key":"87_39146297","doi-asserted-by":"publisher","first-page":"e1001061","DOI":"10.1371\/journal.pcbi.1001061","volume":"7","author":"Sharpton","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1553-734X","issn-type":"print"},{"issue":"3","key":"88_23561778","doi-asserted-by":"publisher","first-page":"377","DOI":"10.1101\/gr.5969107","volume":"17","year":"2007","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"11","key":"89_37406309","doi-asserted-by":"publisher","first-page":"1375","DOI":"10.1038\/ismej.2010.71","volume":"4","author":"Costello","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1751-7362","issn-type":"print"},{"issue":"5","key":"90_40039037","doi-asserted-by":"publisher","first-page":"R50","DOI":"10.1186\/gb-2011-12-5-r50","volume":"12","author":"Caporaso","year":"2011","journal-title":"Genome biology","ISSN":"https:\/\/id.crossref.org\/issn\/1465-6906","issn-type":"print"},{"key":"91_22463276","doi-asserted-by":"publisher","first-page":"371","DOI":"10.1186\/1471-2105-7-371","volume":"7","author":"Lozupone","year":"2006","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"key":"93_40905582","doi-asserted-by":"publisher","first-page":"385","DOI":"10.1186\/1471-2105-12-385","volume":"12","author":"Ondov","year":"2011","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"issue":"14","key":"94_36713154","doi-asserted-by":"publisher","first-page":"6477","DOI":"10.1073\/pnas.1000162107","volume":"107","year":"2010","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"4","key":"95_34570948","doi-asserted-by":"publisher","first-page":"e1000352","DOI":"10.1371\/journal.pcbi.1000352","volume":"5","author":"White","year":"2009","ISSN":"https:\/\/id.crossref.org\/issn\/1553-734X","issn-type":"print"},{"issue":"6","key":"96_40222586","doi-asserted-by":"publisher","first-page":"R60","DOI":"10.1186\/gb-2011-12-6-r60","volume":"12","author":"Segata","year":"2011","journal-title":"Genome biology","ISSN":"https:\/\/id.crossref.org\/issn\/1465-6906","issn-type":"print"},{"issue":"6","key":"97_19530904","doi-asserted-by":"publisher","first-page":"589","DOI":"10.1016\/j.gde.2005.09.006","volume":"15","author":"Medini","year":"2005","journal-title":"Current opinion in genetics &amp; development","ISSN":"https:\/\/id.crossref.org\/issn\/0959-437X","issn-type":"print"},{"issue":"2","key":"98_39416780","doi-asserted-by":"publisher","first-page":"e1001314","DOI":"10.1371\/journal.pgen.1001314","volume":"7","author":"Frese","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1553-7390","issn-type":"print"},{"issue":"7","key":"99_28922761","doi-asserted-by":"publisher","first-page":"e156","DOI":"10.1371\/journal.pbio.0050156","volume":"5","author":"Xu","year":"2007","journal-title":"PLoS biology","ISSN":"https:\/\/id.crossref.org\/issn\/1544-9173","issn-type":"print"},{"key":"101_42221863","first-page":"S9","volume":"5","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1753-6561","issn-type":"print"},{"issue":"1","key":"102_42609474","doi-asserted-by":"publisher","first-page":"4","DOI":"10.1186\/2042-5783-1-4","volume":"1","author":"Larsen","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/2042-5783","issn-type":"print"},{"issue":"4","key":"103_29551542","doi-asserted-by":"publisher","first-page":"169","DOI":"10.1093\/dnares\/dsm018","volume":"14","year":"2007","journal-title":"DNA Research","ISSN":"https:\/\/id.crossref.org\/issn\/1340-2838","issn-type":"print"},{"issue":"6","key":"104_37428821","doi-asserted-by":"crossref","first-page":"e1000798","DOI":"10.1371\/journal.pcbi.1000798","volume":"6","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1553-734X","issn-type":"print"},{"issue":"3","key":"105_18929553","doi-asserted-by":"publisher","first-page":"267","DOI":"10.1016\/j.sbi.2005.05.010","volume":"15","author":"Valencia","year":"2005","journal-title":"Current opinion in structural biology","ISSN":"https:\/\/id.crossref.org\/issn\/0959-440X","issn-type":"print"},{"key":"106_36927172","doi-asserted-by":"crossref","first-page":"128","DOI":"10.1002\/prot.22499","volume":"77","year":"2009","journal-title":"Proteins","ISSN":"https:\/\/id.crossref.org\/issn\/0887-3585","issn-type":"print"},{"issue":"22","key":"107_40857155","doi-asserted-by":"publisher","first-page":"3110","DOI":"10.1093\/bioinformatics\/btr541","volume":"27","year":"2011","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"3","key":"108_39743165","doi-asserted-by":"publisher","first-page":"398","DOI":"10.1016\/j.sbi.2011.03.010","volume":"21","author":"Godzik","year":"2011","journal-title":"Current opinion in structural biology","ISSN":"https:\/\/id.crossref.org\/issn\/0959-440X","issn-type":"print"},{"issue":"4","key":"109_29551542","doi-asserted-by":"crossref","first-page":"169","DOI":"10.1093\/dnares\/dsm018","volume":"14","year":"2007","journal-title":"DNA Research","ISSN":"https:\/\/id.crossref.org\/issn\/1340-2838","issn-type":"print"},{"issue":"suppl_2","key":"110_40007437","doi-asserted-by":"publisher","first-page":"W518","DOI":"10.1093\/nar\/gkr388","volume":"39","year":"2011","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"key":"111_42221865","first-page":"977","volume":"2","year":"2005","journal-title":"IEEE INTERNATIONAL SYMPOSIUM ON CCGRID"},{"key":"112_42222111","first-page":"222","volume":"0","year":"2008","journal-title":"IEEE INTERNATIONAL CONFERENCE ON ESCIENCE"},{"issue":"5","key":"113_38989112","doi-asserted-by":"publisher","first-page":"1449","DOI":"10.1096\/fj.10-172205","volume":"25","year":"2011","journal-title":"The FASEB Journal","ISSN":"https:\/\/id.crossref.org\/issn\/0892-6638","issn-type":"print"},{"issue":"5","key":"114_31871547","doi-asserted-by":"publisher","first-page":"714","DOI":"10.1016\/j.cell.2008.08.026","volume":"134","author":"Holmes","year":"2008","journal-title":"Cell","ISSN":"https:\/\/id.crossref.org\/issn\/0092-8674","issn-type":"print"},{"issue":"13","key":"116_40284447","doi-asserted-by":"publisher","first-page":"2516","DOI":"10.1038\/emboj.2011.205","volume":"30","author":"Gao","year":"2011","journal-title":"The EMBO Journal","ISSN":"https:\/\/id.crossref.org\/issn\/0261-4189","issn-type":"print"},{"issue":"3","key":"119_38823252","doi-asserted-by":"publisher","first-page":"431","DOI":"10.1093\/bioinformatics\/btq675","volume":"27","year":"2011","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"9","key":"120_39476102","doi-asserted-by":"publisher","first-page":"1299","DOI":"10.1093\/bioinformatics\/btr134","volume":"27","year":"2011","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"5701","key":"121_18542849","doi-asserted-by":"publisher","first-page":"1555","DOI":"10.1126\/science.1099511","volume":"306","author":"Lee","year":"2004","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"1","key":"122_38667732","doi-asserted-by":"publisher","first-page":"79","DOI":"10.1016\/j.cbpa.2010.10.025","volume":"15","author":"Yang","year":"2011","journal-title":"Current opinion in chemical biology","ISSN":"https:\/\/id.crossref.org\/issn\/1367-5931","issn-type":"print"},{"issue":"9","key":"123_35299026","doi-asserted-by":"publisher","first-page":"701","DOI":"10.1038\/nrd2944","volume":"8","author":"Barnes","year":"2009","journal-title":"Nature reviews. Drug discovery","ISSN":"https:\/\/id.crossref.org\/issn\/1474-1776","issn-type":"print"},{"issue":"27","key":"125_35097101","doi-asserted-by":"publisher","first-page":"11276","DOI":"10.1073\/pnas.0902366106","volume":"106","year":"2009","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"3","key":"126_38118935","doi-asserted-by":"publisher","first-page":"292","DOI":"10.1016\/j.chom.2010.08.004","volume":"8","author":"Garrett","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1934-6069","issn-type":"print"}],"container-title":["Briefings in Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/bib\/article-pdf\/13\/6\/751\/478484\/bbs002.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,3,23]],"date-time":"2025-03-23T23:31:22Z","timestamp":1742772682000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bib\/article-lookup\/doi\/10.1093\/bib\/bbs002"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2012,3,24]]},"references-count":118,"journal-issue":{"issue":"6","published-online":{"date-parts":[[2012,11,21]]},"published-print":{"date-parts":[[2012,11,1]]}},"URL":"https:\/\/doi.org\/10.1093\/bib\/bbs002","relation":{},"ISSN":["1467-5463","1477-4054"],"issn-type":[{"value":"1467-5463","type":"print"},{"value":"1477-4054","type":"electronic"}],"subject":[],"published":{"date-parts":[[2012,3,24]]}}}