{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,18]],"date-time":"2026-01-18T02:46:48Z","timestamp":1768704408601,"version":"3.49.0"},"reference-count":43,"publisher":"Oxford University Press (OUP)","issue":"6","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Briefings in Bioinformatics"],"published-print":{"date-parts":[[2013,11,1]]},"DOI":"10.1093\/bib\/bbs047","type":"journal-article","created":{"date-parts":[[2012,9,9]],"date-time":"2012-09-09T00:26:41Z","timestamp":1347150401000},"page":"713-723","source":"Crossref","is-referenced-by-count":7,"title":["A quantitative model of transcriptional differentiation driving host-pathogen interactions"],"prefix":"10.1093","volume":"14","author":[{"given":"S.","family":"Zhu","sequence":"first","affiliation":[]},{"given":"Z.","family":"Wang","sequence":"additional","affiliation":[]},{"given":"J.","family":"Wang","sequence":"additional","affiliation":[]},{"given":"Y.","family":"Wang","sequence":"additional","affiliation":[]},{"given":"N.","family":"Wang","sequence":"additional","affiliation":[]},{"given":"Z.","family":"Wang","sequence":"additional","affiliation":[]},{"given":"M.","family":"Xu","sequence":"additional","affiliation":[]},{"given":"X.","family":"Su","sequence":"additional","affiliation":[]},{"given":"M.","family":"Wang","sequence":"additional","affiliation":[]},{"given":"S.","family":"Zhang","sequence":"additional","affiliation":[]},{"given":"M.","family":"Huang","sequence":"additional","affiliation":[]},{"given":"R.","family":"Wu","sequence":"additional","affiliation":[]}],"member":"286","published-online":{"date-parts":[[2012,9,8]]},"reference":[{"issue":"1","key":"1_41688592","doi-asserted-by":"publisher","first-page":"5","DOI":"10.2217\/fmb.11.141","volume":"7","author":"De Jonckheere","year":"2012","ISSN":"https:\/\/id.crossref.org\/issn\/1746-0921","issn-type":"print"},{"issue":"7393","key":"2_42378890","doi-asserted-by":"publisher","first-page":"186","DOI":"10.1038\/nature10947","volume":"484","author":"Fisher","year":"2012","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"26","key":"3_19684210","doi-asserted-by":"publisher","first-page":"15718","DOI":"10.1073\/pnas.2536670100","volume":"100","year":"2003","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"12","key":"4_42010980","doi-asserted-by":"publisher","first-page":"4544","DOI":"10.1073\/pnas.1120310109","volume":"109","year":"2012","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"7","key":"5_17553586","doi-asserted-by":"publisher","first-page":"1944","DOI":"10.1093\/nar\/gkg293","volume":"31","author":"Mannhaupt","year":"2003","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"4","key":"6_28416559","doi-asserted-by":"crossref","first-page":"770","DOI":"10.1038\/nprot.2007.78","volume":"2","author":"Bumann","year":"2007","ISSN":"https:\/\/id.crossref.org\/issn\/1750-2799","issn-type":"print"},{"issue":"7","key":"7_31403652","doi-asserted-by":"publisher","first-page":"621","DOI":"10.1038\/nmeth.1226","volume":"5","author":"Mortazavi","year":"2008","ISSN":"https:\/\/id.crossref.org\/issn\/1548-7091","issn-type":"print"},{"issue":"2","key":"8_36649516","doi-asserted-by":"publisher","first-page":"90","DOI":"10.1016\/j.chom.2010.01.008","volume":"7","author":"Kafsack","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1934-6069","issn-type":"print"},{"issue":"4","key":"9_33509469","doi-asserted-by":"publisher","first-page":"531","DOI":"10.1111\/j.1462-5822.2009.01281.x","volume":"11","author":"Kirschner","year":"2009","journal-title":"Cellular microbiology","ISSN":"https:\/\/id.crossref.org\/issn\/1462-5814","issn-type":"print"},{"issue":"7353","key":"10_40257802","doi-asserted-by":"publisher","first-page":"604","DOI":"10.1038\/nature10172","volume":"474","author":"Avrani","year":"2011","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"key":"11_43573598","first-page":"931","volume":"269","year":"2001","journal-title":"Proceedings of the Royal Society B: Biological Sciences","ISSN":"https:\/\/id.crossref.org\/issn\/0962-8452","issn-type":"print"},{"issue":"7286","key":"12_36703645","doi-asserted-by":"publisher","first-page":"275","DOI":"10.1038\/nature08798","volume":"464","author":"Paterson","year":"2010","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"key":"13_25162781","doi-asserted-by":"crossref","first-page":"158","DOI":"10.2307\/2406026","volume":"12","year":"1958","journal-title":"Evolution","ISSN":"https:\/\/id.crossref.org\/issn\/1558-5646","issn-type":"print"},{"issue":"6","key":"14_9925918","doi-asserted-by":"crossref","first-page":"213","DOI":"10.1016\/0168-9525(92)90236-W","volume":"8","author":"Frank","year":"1992","journal-title":"Trends in genetics : TIG","ISSN":"https:\/\/id.crossref.org\/issn\/0168-9525","issn-type":"print"},{"key":"15_30735417","doi-asserted-by":"crossref","first-page":"121","DOI":"10.1038\/360121a0","volume":"360","year":"1992","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"1458","key":"16_33392079","doi-asserted-by":"publisher","first-page":"2183","DOI":"10.1098\/rspb.2000.1267","volume":"267","author":"Sasaki","year":"2000","journal-title":"Proceedings of the Royal Society B: Biological Sciences","ISSN":"https:\/\/id.crossref.org\/issn\/0962-8452","issn-type":"print"},{"issue":"19","key":"17_40435887","doi-asserted-by":"publisher","first-page":"e130","DOI":"10.1093\/nar\/gkr592","volume":"39","year":"2011","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"key":"18_43573599","doi-asserted-by":"crossref","first-page":"614","DOI":"10.1007\/s001220050081","volume":"100","year":"2000","journal-title":"TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik","ISSN":"https:\/\/id.crossref.org\/issn\/0040-5752","issn-type":"print"},{"key":"19_29197509","doi-asserted-by":"crossref","first-page":"577","DOI":"10.1046\/j.1469-8137.2003.00968.x","volume":"161","year":"2004","journal-title":"New Phytologist","ISSN":"https:\/\/id.crossref.org\/issn\/1469-8137","issn-type":"print"},{"key":"20_43573600","doi-asserted-by":"crossref","first-page":"222e","DOI":"10.1371\/journal.pgen.0020222","volume":"2","year":"2006","journal-title":"ELEGANS PLOS GENET"},{"issue":"4","key":"21_30924680","doi-asserted-by":"publisher","first-page":"e83","DOI":"10.1371\/journal.pbio.0060083","volume":"6","author":"Smith","year":"2008","journal-title":"PLoS biology","ISSN":"https:\/\/id.crossref.org\/issn\/1544-9173","issn-type":"print"},{"issue":"2","key":"22_40309048","doi-asserted-by":"publisher","first-page":"162","DOI":"10.1093\/bib\/bbr032","volume":"13","year":"2012","journal-title":"Briefings in Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1467-5463","issn-type":"print"},{"issue":"21","key":"23_11341452","doi-asserted-by":"publisher","first-page":"10431","DOI":"10.1128\/JVI.75.21.10431-10445.2001","volume":"75","author":"Johnston","year":"2001","journal-title":"Journal of Virology","ISSN":"https:\/\/id.crossref.org\/issn\/0022-538X","issn-type":"print"},{"issue":"4","key":"24_39624527","doi-asserted-by":"publisher","first-page":"400","DOI":"10.1016\/j.pbi.2011.03.005","volume":"14","author":"de Jonge","year":"2011","journal-title":"Current opinion in plant biology","ISSN":"https:\/\/id.crossref.org\/issn\/1369-5266","issn-type":"print"},{"issue":"6071","key":"25_41896703","doi-asserted-by":"publisher","first-page":"936","DOI":"10.1126\/science.1214935","volume":"335","author":"Medzhitov","year":"2012","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"3326","key":"26_22017815","doi-asserted-by":"publisher","first-page":"714","DOI":"10.1126\/science.128.3326.714","volume":"128","author":"CALDWELL","year":"1958","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"8","key":"27_34134406","doi-asserted-by":"publisher","first-page":"1026","DOI":"10.1093\/bioinformatics\/btp113","volume":"25","year":"2009","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"key":"28_43573601","doi-asserted-by":"crossref","first-page":"45","DOI":"10.1007\/BF02949788","volume":"4","year":"1952","journal-title":"ANN INST STATIST MATH"},{"key":"29_43573602","first-page":"43","volume":"18","year":"1993","journal-title":"MATH SCI"},{"key":"30_43573603","doi-asserted-by":"crossref","first-page":"23","DOI":"10.1016\/S0378-3758(02)00408-1","volume":"119","year":"2004","journal-title":"J STAT PLAN INFER"},{"key":"31_43573604","doi-asserted-by":"crossref","first-page":"283","DOI":"10.1002\/bimj.200710403","volume":"50","year":"2008","journal-title":"BIOMET J"},{"key":"32_43573605","doi-asserted-by":"crossref","first-page":"409","DOI":"10.1016\/S0269-7491(99)00034-2","volume":"105","year":"1999","journal-title":"Environmental Pollution (1987)","ISSN":"https:\/\/id.crossref.org\/issn\/1873-6424","issn-type":"print"},{"issue":"1","key":"33_32672279","doi-asserted-by":"publisher","first-page":"57","DOI":"10.1038\/nrg2484","volume":"10","author":"Wang","year":"2009","journal-title":"Nature reviews. Genetics","ISSN":"https:\/\/id.crossref.org\/issn\/1471-0056","issn-type":"print"},{"issue":"4","key":"34_34380325","doi-asserted-by":"publisher","first-page":"151","DOI":"10.1016\/j.tim.2009.01.002","volume":"17","author":"de Jonge","year":"2009","journal-title":"Trends in microbiology","ISSN":"https:\/\/id.crossref.org\/issn\/0966-842X","issn-type":"print"},{"issue":"5994","key":"35_37931965","doi-asserted-by":"publisher","first-page":"953","DOI":"10.1126\/science.1190859","volume":"329","author":"de Jonge","year":"2010","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"key":"36_17509611","doi-asserted-by":"crossref","first-page":"143","DOI":"10.1007\/978-3-642-55747-7_6","volume":"274","author":"Wang","year":"2003","journal-title":"Current topics in microbiology and immunology","ISSN":"https:\/\/id.crossref.org\/issn\/0070-217X","issn-type":"print"},{"issue":"10","key":"37_31656973","doi-asserted-by":"publisher","first-page":"4260","DOI":"10.1091\/mbc.E08-02-0173","volume":"19","year":"2008","journal-title":"Molecular Biology of the Cell","ISSN":"https:\/\/id.crossref.org\/issn\/1059-1524","issn-type":"print"},{"issue":"2","key":"38_32935238","doi-asserted-by":"publisher","first-page":"235","DOI":"10.1111\/j.1365-313X.2008.03772.x","volume":"58","author":"Kwon","year":"2009","journal-title":"The Plant journal : for cell and molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0960-7412","issn-type":"print"},{"issue":"suppl_1","key":"39_35965868","doi-asserted-by":"publisher","first-page":"D814","DOI":"10.1093\/nar\/gkp978","volume":"38","year":"2010","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"3","key":"40_6544718","doi-asserted-by":"crossref","first-page":"203","DOI":"10.1007\/s002399910023","volume":"50","author":"Pan","year":"2000","journal-title":"Journal of Molecular Evolution","ISSN":"https:\/\/id.crossref.org\/issn\/1432-1432","issn-type":"print"},{"issue":"4","key":"41_17566234","doi-asserted-by":"publisher","first-page":"806","DOI":"10.1105\/tpc.150470","volume":"15","author":"Eckardt","year":"2003","journal-title":"The Plant Cell Online","ISSN":"https:\/\/id.crossref.org\/issn\/1040-4651","issn-type":"print"},{"issue":"12","key":"42_33404169","doi-asserted-by":"publisher","first-page":"e1000247","DOI":"10.1371\/journal.ppat.1000247","volume":"4","author":"Carvalho","year":"2008","ISSN":"https:\/\/id.crossref.org\/issn\/1553-7366","issn-type":"print"},{"issue":"6","key":"43_34998929","doi-asserted-by":"publisher","first-page":"e5781","DOI":"10.1371\/journal.pone.0005781","volume":"4","author":"Santos","year":"2009","ISSN":"https:\/\/id.crossref.org\/issn\/1932-6203","issn-type":"print"}],"container-title":["Briefings in Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/bib\/article-pdf\/14\/6\/713\/468462\/bbs047.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2017,8,22]],"date-time":"2017-08-22T14:18:30Z","timestamp":1503411510000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bib\/article-lookup\/doi\/10.1093\/bib\/bbs047"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2012,9,8]]},"references-count":43,"journal-issue":{"issue":"6","published-online":{"date-parts":[[2013,11,8]]},"published-print":{"date-parts":[[2013,11,1]]}},"URL":"https:\/\/doi.org\/10.1093\/bib\/bbs047","relation":{},"ISSN":["1467-5463","1477-4054"],"issn-type":[{"value":"1467-5463","type":"print"},{"value":"1477-4054","type":"electronic"}],"subject":[],"published":{"date-parts":[[2012,9,8]]}}}