{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,27]],"date-time":"2026-10-27T05:12:17Z","timestamp":1793077937193,"version":"4.5.0"},"reference-count":122,"publisher":"Oxford University Press (OUP)","issue":"3","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Briefings in Bioinformatics"],"published-print":{"date-parts":[[2014,5,1]]},"DOI":"10.1093\/bib\/bbt068","type":"journal-article","created":{"date-parts":[[2013,9,21]],"date-time":"2013-09-21T01:05:05Z","timestamp":1379725505000},"page":"376-389","source":"Crossref","is-referenced-by-count":134,"title":["Information theory applications for biological sequence analysis"],"prefix":"10.1093","volume":"15","author":[{"given":"S.","family":"Vinga","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2013,9,20]]},"reference":[{"key":"1_24911185","doi-asserted-by":"crossref","first-page":"379","DOI":"10.1002\/j.1538-7305.1948.tb01338.x","volume":"27","year":"1948","journal-title":"BELL SYST TECH J"},{"key":"2_24062704","doi-asserted-by":"crossref","first-page":"623","DOI":"10.1002\/j.1538-7305.1948.tb00917.x","volume":"27","year":"1948","journal-title":"BELL SYST TECH J"},{"issue":"7","key":"7_40162586","doi-asserted-by":"publisher","first-page":"475","DOI":"10.1038\/nrg3028","volume":"12","author":"Danchin","year":"2011","journal-title":"Nature reviews. Genetics","ISSN":"https:\/\/id.crossref.org\/issn\/1471-0056","issn-type":"print"},{"issue":"2","key":"9_7250173","doi-asserted-by":"publisher","first-page":"281","DOI":"10.1016\/0022-5193(66)90127-5","volume":"10","author":"Gatlin","year":"1966","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"issue":"2","key":"10_7433052","doi-asserted-by":"publisher","first-page":"181","DOI":"10.1016\/0022-5193(68)90160-4","volume":"18","author":"Gatlin","year":"1968","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"issue":"2","key":"11_4997559","doi-asserted-by":"publisher","first-page":"109","DOI":"10.1007\/BF02138369","volume":"27","author":"Granero-Porati","year":"1988","journal-title":"Journal of Molecular Evolution","ISSN":"https:\/\/id.crossref.org\/issn\/1432-1432","issn-type":"print"},{"issue":"4","key":"12_8061976","doi-asserted-by":"publisher","first-page":"803","DOI":"10.1016\/0022-5193(79)90282-0","volume":"81","author":"Rao","year":"1979","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"key":"13_25809607","doi-asserted-by":"crossref","first-page":"1187","DOI":"10.1016\/0031-3203(95)00145-X","volume":"29","year":"1996","ISSN":"https:\/\/id.crossref.org\/issn\/0031-3203","issn-type":"print"},{"key":"14_46542275","doi-asserted-by":"crossref","first-page":"3","DOI":"10.1016\/j.plrev.2004.01.002","volume":"1","year":"2004","ISSN":"https:\/\/id.crossref.org\/issn\/1571-0645","issn-type":"print"},{"key":"15_46542276","doi-asserted-by":"crossref","first-page":"161","DOI":"10.1007\/s00202-007-0062-6","volume":"90","year":"2007","journal-title":"ELECTR ENG"},{"key":"16_46542277","doi-asserted-by":"crossref","first-page":"77","DOI":"10.1007\/s12304-012-9152-6","volume":"6","year":"2013","ISSN":"https:\/\/id.crossref.org\/issn\/1875-1350","issn-type":"print"},{"key":"17_43969509","doi-asserted-by":"crossref","first-page":"649","DOI":"10.1109\/TIT.2009.2036971","volume":"56","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/0018-9448","issn-type":"print"},{"key":"18_46542278","doi-asserted-by":"crossref","first-page":"51","DOI":"10.1016\/S0928-4931(01)00362-9","volume":"18","year":"2001","journal-title":"MATER SCI ENG CBIOMIMETIC SUPRAMOL SYS"},{"issue":"12","key":"19_17343936","doi-asserted-by":"publisher","first-page":"1085","DOI":"10.1002\/bies.10192","volume":"24","author":"Adami","year":"2002","journal-title":"BioEssays : news and reviews in molecular, cellular and developmental biology","ISSN":"https:\/\/id.crossref.org\/issn\/0265-9247","issn-type":"print"},{"key":"21_46542279","first-page":"34","volume":"12","year":"2010","journal-title":"ENTROPY"},{"key":"22_46542280","doi-asserted-by":"crossref","first-page":"667","DOI":"10.1109\/TIT.2009.2037046","volume":"56","year":"2010","journal-title":"IEEE TRANS INFORM THEORY"},{"issue":"13","key":"23_34165964","doi-asserted-by":"publisher","first-page":"1575","DOI":"10.1093\/bioinformatics\/btp117","volume":"25","year":"2009","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"1","key":"24_5779393","doi-asserted-by":"publisher","first-page":"17","DOI":"10.1016\/S0303-2647(97)00039-7","volume":"44","author":"Ji","year":"1997","journal-title":"Biosystems","ISSN":"https:\/\/id.crossref.org\/issn\/1872-8324","issn-type":"print"},{"key":"25_29711642","first-page":"579","volume":"80","year":"1992","journal-title":"American Scientist","ISSN":"https:\/\/id.crossref.org\/issn\/0003-0996","issn-type":"print"},{"key":"26_46542281","doi-asserted-by":"crossref","first-page":"2486","DOI":"10.1016\/j.tcs.2010.10.040","volume":"412","year":"2011","journal-title":"THEOR COMPUT SCI"},{"issue":"4","key":"28_17519774","doi-asserted-by":"publisher","first-page":"513","DOI":"10.1093\/bioinformatics\/btg005","volume":"19","author":"Vinga","year":"2003","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"key":"29_34469483","doi-asserted-by":"crossref","first-page":"55","DOI":"10.1007\/BF02728525","volume":"23","year":"1998","journal-title":"Journal of biosciences","ISSN":"https:\/\/id.crossref.org\/issn\/0250-5991","issn-type":"print"},{"issue":"2","key":"30_38312377","doi-asserted-by":"publisher","first-page":"790","DOI":"10.1021\/cr800198j","volume":"111","author":"Randic\u00a0\u00a0","year":"2011","journal-title":"Chemical Reviews","ISSN":"https:\/\/id.crossref.org\/issn\/1520-6890","issn-type":"print"},{"issue":"4","key":"31_5841292","doi-asserted-by":"publisher","first-page":"257","DOI":"10.1016\/S0097-8485(97)00022-3","volume":"21","author":"Li","year":"1997","journal-title":"Computers & chemistry","ISSN":"https:\/\/id.crossref.org\/issn\/0097-8485","issn-type":"print"},{"key":"32_46542282","doi-asserted-by":"crossref","first-page":"13","DOI":"10.15388\/Informatica.2010.270","volume":"21","year":"2010","journal-title":"INFORMATICA"},{"key":"33_25967141","doi-asserted-by":"crossref","first-page":"57","DOI":"10.3367\/UFNr.0170.200001c.0057","volume":"170","year":"2000","journal-title":"Uspekhi Fizicheskikh Nauk","ISSN":"https:\/\/id.crossref.org\/issn\/0042-1294","issn-type":"print"},{"key":"34_46542283","doi-asserted-by":"crossref","first-page":"771","DOI":"10.1109\/TIT.2009.2037041","volume":"56","year":"2010","journal-title":"IEEE TRANS INFORM THEORY"},{"issue":"8","key":"35_5631705","doi-asserted-by":"publisher","first-page":"2163","DOI":"10.1093\/nar\/18.8.2163","volume":"18","author":"Jeffrey","year":"1990","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"key":"36_17443423","doi-asserted-by":"publisher","first-page":"6","DOI":"10.1186\/1471-2105-3-6","volume":"3","author":"Almeida","year":"2002","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"key":"37_34506096","doi-asserted-by":"publisher","first-page":"100","DOI":"10.1186\/1471-2105-10-100","volume":"10","author":"Almeida","year":"2009","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"issue":"1","key":"38_42502954","doi-asserted-by":"publisher","first-page":"10","DOI":"10.1186\/1748-7188-7-10","volume":"7","author":"Vinga","year":"2012","ISSN":"https:\/\/id.crossref.org\/issn\/1748-7188","issn-type":"print"},{"key":"39_46542284","doi-asserted-by":"crossref","first-page":"1","DOI":"10.2307\/1401301","volume":"33","year":"1965","journal-title":"REVI INT STAT INST"},{"key":"41_46542285","doi-asserted-by":"crossref","first-page":"2489","DOI":"10.1016\/j.ins.2008.02.003","volume":"178","year":"2008","journal-title":"INFORM SCI"},{"issue":"7","key":"43_16077300","doi-asserted-by":"publisher","first-page":"283","DOI":"10.1016\/S0168-9525(00)89076-9","volume":"11","author":"Karlin","year":"1995","journal-title":"Trends in genetics : TIG","ISSN":"https:\/\/id.crossref.org\/issn\/0168-9525","issn-type":"print"},{"issue":"4","key":"44_9733539","doi-asserted-by":"publisher","first-page":"1358","DOI":"10.1073\/pnas.89.4.1358","volume":"89","author":"Burge","year":"1992","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"1","key":"45_19381093","doi-asserted-by":"publisher","first-page":"23","DOI":"10.1007\/s00239-004-0209-2","volume":"61","author":"Nikolaou","year":"2005","journal-title":"Journal of Molecular Evolution","ISSN":"https:\/\/id.crossref.org\/issn\/1432-1432","issn-type":"print"},{"issue":"2","key":"46_9280953","doi-asserted-by":"publisher","first-page":"235","DOI":"10.1016\/S0022-5193(05)80054-2","volume":"147","author":"Hariri","year":"1990","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"issue":"3","key":"47_10476130","doi-asserted-by":"publisher","first-page":"379","DOI":"10.1006\/jtbi.2000.2138","volume":"206","author":"Weiss","year":"2000","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"issue":"suppl_2","key":"48_18236566","doi-asserted-by":"publisher","first-page":"W628","DOI":"10.1093\/nar\/gkh466","volume":"32","author":"Orlov","year":"2004","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"1-3","key":"49_11457451","doi-asserted-by":"publisher","first-page":"23","DOI":"10.1016\/S0303-2647(01)00171-X","volume":"64","author":"Jim\u00a0\u00a0nez-Monta\u00a0\u00a0o","year":"2002","journal-title":"Biosystems","ISSN":"https:\/\/id.crossref.org\/issn\/1872-8324","issn-type":"print"},{"issue":"17","key":"50_18871829","doi-asserted-by":"publisher","first-page":"178103","DOI":"10.1103\/PhysRevLett.94.178103","volume":"94","author":"Chen","year":"2005","journal-title":"Physical Review Letters","ISSN":"https:\/\/id.crossref.org\/issn\/1079-7114","issn-type":"print"},{"key":"52_46542286","doi-asserted-by":"crossref","first-page":"3135","DOI":"10.1016\/j.nonrwa.2011.05.013","volume":"12","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1468-1218","issn-type":"print"},{"issue":"5 Pt 1","key":"53_39090273","doi-asserted-by":"publisher","first-page":"051917","DOI":"10.1103\/PhysRevE.82.051917","volume":"82","author":"Athanasopoulou","year":"2010","journal-title":"Physical review. E, Statistical, nonlinear, and soft matter physics","ISSN":"https:\/\/id.crossref.org\/issn\/1539-3755","issn-type":"print"},{"key":"54_46542287","doi-asserted-by":"crossref","first-page":"97","DOI":"10.1016\/0960-0779(94)90020-5","volume":"4","year":"1994","ISSN":"https:\/\/id.crossref.org\/issn\/0960-0779","issn-type":"print"},{"key":"55_26846921","doi-asserted-by":"crossref","first-page":"333","DOI":"10.1137\/1104033","volume":"4","year":"1959","journal-title":"THEORY PROBAB APPL"},{"key":"56_46542288","doi-asserted-by":"crossref","first-page":"369","DOI":"10.1016\/0375-9601(88)90193-4","volume":"128","year":"1988","journal-title":"PHYS LETT A"},{"key":"57_46542289","doi-asserted-by":"crossref","first-page":"303","DOI":"10.1209\/0295-5075\/23\/5\/001","volume":"23","year":"1993","journal-title":"Europhysics Letters","ISSN":"https:\/\/id.crossref.org\/issn\/0295-5075","issn-type":"print"},{"issue":"3","key":"58_5776889","doi-asserted-by":"publisher","first-page":"369","DOI":"10.1006\/jtbi.1997.0493","volume":"188","author":"Schmitt","year":"1997","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"key":"59_46542290","doi-asserted-by":"crossref","first-page":"2551","DOI":"10.1088\/0305-4470\/31\/11\/007","volume":"31","year":"1998","journal-title":"J PHYS MATH GEN"},{"issue":"4 Pt 2","key":"61_35065092","doi-asserted-by":"publisher","first-page":"046208","DOI":"10.1103\/PhysRevE.79.046208","volume":"79","author":"Lesne","year":"2009","journal-title":"Physical review. E, Statistical, nonlinear, and soft matter physics","ISSN":"https:\/\/id.crossref.org\/issn\/1539-3755","issn-type":"print"},{"key":"62_46542291","doi-asserted-by":"crossref","first-page":"191","DOI":"10.1209\/0295-5075\/14\/3\/001","volume":"14","year":"1991","journal-title":"Europhysics Letters","ISSN":"https:\/\/id.crossref.org\/issn\/0295-5075","issn-type":"print"},{"issue":"2","key":"63_16299082","doi-asserted-by":"publisher","first-page":"151","DOI":"10.1006\/jtbi.1996.0091","volume":"180","author":"Li\u00a0\u00a0","year":"1996","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"issue":"1","key":"65_10801220","doi-asserted-by":"publisher","first-page":"125","DOI":"10.1089\/cmb.1999.6.125","volume":"6","author":"Loewenstern","year":"1999","journal-title":"Journal of computational biology : a journal of computational molecular cell biology","ISSN":"https:\/\/id.crossref.org\/issn\/1066-5277","issn-type":"print"},{"issue":"2","key":"66_11434257","doi-asserted-by":"publisher","first-page":"175","DOI":"10.1016\/S0166-6851(01)00388-7","volume":"118","author":"Stern","year":"2001","journal-title":"Molecular and biochemical parasitology","ISSN":"https:\/\/id.crossref.org\/issn\/0166-6851","issn-type":"print"},{"key":"67_31456432","first-page":"S10","volume":"8","year":"2007","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"key":"68_46542292","doi-asserted-by":"crossref","first-page":"1861","DOI":"10.1016\/j.csda.2008.07.002","volume":"53","year":"2009","journal-title":"COMPUT STAT DATA ANAL"},{"key":"69_46542293","doi-asserted-by":"crossref","first-page":"1551","DOI":"10.1109\/TIT.2004.830771","volume":"50","year":"2004","journal-title":"IEEE TRANS INFORM THEORY"},{"issue":"6","key":"70_20148675","doi-asserted-by":"publisher","first-page":"1191","DOI":"10.1162\/089976603321780272","volume":"15","author":"Paninski","year":"2003","journal-title":"Neural Computation","ISSN":"https:\/\/id.crossref.org\/issn\/0899-7667","issn-type":"print"},{"issue":"10","key":"71_6366859","doi-asserted-by":"publisher","first-page":"1391","DOI":"10.1093\/oxfordjournals.molbev.a026048","volume":"16","author":"Deschavanne","year":"1999","journal-title":"Molecular Biology and Evolution","ISSN":"https:\/\/id.crossref.org\/issn\/0737-4038","issn-type":"print"},{"issue":"4","key":"72_10247814","doi-asserted-by":"publisher","first-page":"457","DOI":"10.1006\/jtbi.1993.1030","volume":"160","author":"Oliver","year":"1993","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"key":"73_46542294","doi-asserted-by":"crossref","first-page":"567","DOI":"10.1016\/0167-8655(94)90017-5","volume":"15","year":"1994","ISSN":"https:\/\/id.crossref.org\/issn\/0167-8655","issn-type":"print"},{"issue":"3","key":"74_18485960","doi-asserted-by":"publisher","first-page":"377","DOI":"10.1016\/j.jtbi.2004.06.030","volume":"231","author":"Vinga","year":"2004","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"issue":"2","key":"76_11064031","doi-asserted-by":"publisher","first-page":"149","DOI":"10.1093\/bioinformatics\/17.2.149","volume":"17","author":"Li","year":"2001","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"16","key":"77_17885744","doi-asserted-by":"publisher","first-page":"2122","DOI":"10.1093\/bioinformatics\/btg295","volume":"19","author":"Otu","year":"2003","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"2","key":"79_17568876","doi-asserted-by":"publisher","first-page":"309","DOI":"10.1016\/S0092-8240(02)00107-6","volume":"65","author":"Sadovsky","year":"2003","journal-title":"Bulletin of mathematical biology","ISSN":"https:\/\/id.crossref.org\/issn\/0092-8240","issn-type":"print"},{"issue":"18","key":"80_18561280","doi-asserted-by":"publisher","first-page":"3455","DOI":"10.1093\/bioinformatics\/bth426","volume":"20","year":"2004","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"22","key":"81_19535423","doi-asserted-by":"publisher","first-page":"4125","DOI":"10.1093\/bioinformatics\/bti658","volume":"21","year":"2005","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"8","key":"82_19495132","doi-asserted-by":"publisher","first-page":"1103","DOI":"10.1089\/cmb.2005.12.1103","volume":"12","author":"Goldberger","year":"2005","journal-title":"Journal of computational biology : a journal of computational molecular cell biology","ISSN":"https:\/\/id.crossref.org\/issn\/1066-5277","issn-type":"print"},{"issue":"23","key":"83_16624741","doi-asserted-by":"publisher","first-page":"3169","DOI":"10.1103\/PhysRevLett.73.3169","volume":"73","author":"Mantegna","year":"1994","journal-title":"Physical Review Letters","ISSN":"https:\/\/id.crossref.org\/issn\/1079-7114","issn-type":"print"},{"issue":"1","key":"85_10316356","doi-asserted-by":"publisher","first-page":"16","DOI":"10.1093\/bioinformatics\/16.1.16","volume":"16","author":"Stormo","year":"2000","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"3","key":"86_13890065","doi-asserted-by":"publisher","first-page":"415","DOI":"10.1016\/0022-2836(86)90165-8","volume":"188","author":"Schneider","year":"1986","journal-title":"Journal of molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0022-2836","issn-type":"print"},{"issue":"20","key":"87_9220356","doi-asserted-by":"publisher","first-page":"6097","DOI":"10.1093\/nar\/18.20.6097","volume":"18","author":"Schneider","year":"1990","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"key":"88_39426013","doi-asserted-by":"crossref","first-page":"e001","DOI":"10.1621\/nrs.09001","volume":"9","author":"Willis","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1550-7629","issn-type":"print"},{"key":"89_34045905","doi-asserted-by":"publisher","first-page":"57","DOI":"10.1186\/1471-2105-10-57","volume":"10","author":"Erill","year":"2009","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"key":"91_46542295","doi-asserted-by":"crossref","first-page":"19","DOI":"10.1186\/1742-4682-9-19","volume":"9","year":"2012","journal-title":"THEORET BIOL MED MODELL"},{"key":"92_46542296","first-page":"4S","volume":"6","year":"2012","journal-title":"BMC SYS BIOL"},{"issue":"20","key":"93_29565490","doi-asserted-by":"publisher","first-page":"6762","DOI":"10.1093\/nar\/gkm631","volume":"35","year":"2007","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"key":"96_46542297","doi-asserted-by":"crossref","first-page":"133","DOI":"10.1109\/TNB.2008.2000744","volume":"7","year":"2008","journal-title":"IEEE TRANS NANOBIOSCI"},{"issue":"3","key":"97_18087651","doi-asserted-by":"publisher","first-page":"429","DOI":"10.1016\/j.jtbi.2003.11.026","volume":"227","author":"Krishnamachari","year":"2004","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"key":"98_46542298","doi-asserted-by":"crossref","first-page":"734","DOI":"10.1109\/TIT.2009.2037038","volume":"56","year":"2010","journal-title":"IEEE TRANS INFORM THEORY"},{"key":"99_46542299","doi-asserted-by":"crossref","first-page":"98","DOI":"10.1007\/978-3-540-78839-3_9","volume":"4955","year":"2008","journal-title":"RES COMPUT MOL BIOL PROC"},{"issue":"20","key":"100_40691495","doi-asserted-by":"publisher","first-page":"2806","DOI":"10.1093\/bioinformatics\/btr492","volume":"27","year":"2011","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"1","key":"101_36489112","doi-asserted-by":"publisher","first-page":"e8797","DOI":"10.1371\/journal.pone.0008797","volume":"5","author":"Xu","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1932-6203","issn-type":"print"},{"key":"102_25481027","doi-asserted-by":"crossref","first-page":"34","DOI":"10.1023\/A:1014290205497","volume":"36","year":"2002","journal-title":"Molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0026-8933","issn-type":"print"},{"issue":"4","key":"104_18766286","doi-asserted-by":"publisher","first-page":"334","DOI":"10.1002\/humu.20151","volume":"25","author":"Nalla","year":"2005","journal-title":"Human mutation","ISSN":"https:\/\/id.crossref.org\/issn\/1059-7794","issn-type":"print"},{"issue":"3","key":"105_40220234","doi-asserted-by":"publisher","first-page":"199","DOI":"10.1016\/j.compbiolchem.2011.04.007","volume":"35","author":"Garbarine","year":"2011","journal-title":"Computational biology and chemistry","ISSN":"https:\/\/id.crossref.org\/issn\/1476-9271","issn-type":"print"},{"key":"106_32474575","doi-asserted-by":"publisher","first-page":"509","DOI":"10.1186\/1471-2164-9-509","volume":"9","author":"Liu","year":"2008","journal-title":"BMC genomics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2164","issn-type":"print"},{"issue":"23","key":"107_35595955","doi-asserted-by":"publisher","first-page":"3064","DOI":"10.1093\/bioinformatics\/btp546","volume":"25","year":"2009","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"key":"108_43284106","doi-asserted-by":"publisher","first-page":"174","DOI":"10.1186\/1471-2105-13-174","volume":"13","author":"Wei","year":"2012","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"key":"109_46542300","doi-asserted-by":"crossref","first-page":"535","DOI":"10.1016\/S0378-4371(03)00399-6","volume":"327","year":"2003","ISSN":"https:\/\/id.crossref.org\/issn\/0378-4371","issn-type":"print"},{"issue":"1","key":"110_18794171","doi-asserted-by":"publisher","first-page":"81","DOI":"10.1016\/j.gene.2004.11.026","volume":"345","author":"Dehnert","year":"2005","journal-title":"Gene","ISSN":"https:\/\/id.crossref.org\/issn\/0378-1119","issn-type":"print"},{"key":"111_46542301","doi-asserted-by":"crossref","first-page":"5624","DOI":"10.1103\/PhysRevE.61.5624","volume":"61","year":"2000","journal-title":"Physical review. E, Statistical, nonlinear, and soft matter physics","ISSN":"https:\/\/id.crossref.org\/issn\/1539-3755","issn-type":"print"},{"key":"112_46542302","doi-asserted-by":"crossref","first-page":"458","DOI":"10.1016\/S0378-4371(02)00859-2","volume":"312","year":"2002","journal-title":"PHYS A"},{"issue":"1-3","key":"113_18223121","doi-asserted-by":"publisher","first-page":"155","DOI":"10.1016\/j.febslet.2004.05.026","volume":"568","author":"Carels","year":"2004","journal-title":"FEBS Letters","ISSN":"https:\/\/id.crossref.org\/issn\/1873-3468","issn-type":"print"},{"key":"114_30339887","doi-asserted-by":"publisher","first-page":"48","DOI":"10.1186\/1471-2105-9-48","volume":"9","author":"Bauer","year":"2008","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"issue":"6","key":"115_29764662","doi-asserted-by":"publisher","first-page":"1169","DOI":"10.1007\/s12038-007-0119-8","volume":"32","author":"Swati","year":"2007","journal-title":"Journal of biosciences","ISSN":"https:\/\/id.crossref.org\/issn\/0250-5991","issn-type":"print"},{"issue":"3-4","key":"116_10886103","doi-asserted-by":"publisher","first-page":"275","DOI":"10.1016\/S0097-8485(99)00009-1","volume":"23","author":"Crochemore","year":"1999","journal-title":"Computers & chemistry","ISSN":"https:\/\/id.crossref.org\/issn\/0097-8485","issn-type":"print"},{"issue":"5","key":"117_17087181","doi-asserted-by":"publisher","first-page":"679","DOI":"10.1093\/bioinformatics\/18.5.679","volume":"18","author":"Troyanskaya","year":"2002","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"3-4","key":"118_10886102","doi-asserted-by":"publisher","first-page":"263","DOI":"10.1016\/S0097-8485(99)00007-8","volume":"23","author":"Gabrielian","year":"1999","journal-title":"Computers & chemistry","ISSN":"https:\/\/id.crossref.org\/issn\/0097-8485","issn-type":"print"},{"issue":"2","key":"119_30562691","doi-asserted-by":"publisher","first-page":"380","DOI":"10.1016\/j.jtbi.2007.11.021","volume":"251","author":"Pirhaji","year":"2008","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"issue":"8","key":"120_39213795","doi-asserted-by":"publisher","first-page":"1061","DOI":"10.1093\/bioinformatics\/btr077","volume":"27","year":"2011","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"6","key":"121_36545328","doi-asserted-by":"publisher","first-page":"737","DOI":"10.1093\/bioinformatics\/btq042","volume":"26","year":"2010","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"5 Pt 1","key":"122_40285627","doi-asserted-by":"publisher","first-page":"051918","DOI":"10.1103\/PhysRevE.83.051918","volume":"83","author":"Bose","year":"2011","journal-title":"Physical review. E, Statistical, nonlinear, and soft matter physics","ISSN":"https:\/\/id.crossref.org\/issn\/1539-3755","issn-type":"print"},{"key":"123_46542303","doi-asserted-by":"crossref","first-page":"1565","DOI":"10.1016\/j.chaos.2007.06.036","volume":"39","year":"2009","ISSN":"https:\/\/id.crossref.org\/issn\/0960-0779","issn-type":"print"},{"issue":"1","key":"124_18620572","doi-asserted-by":"publisher","first-page":"e6","DOI":"10.1093\/nar\/gni004","volume":"33","author":"Dufraigne","year":"2005","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"key":"125_22834308","doi-asserted-by":"publisher","first-page":"18","DOI":"10.1186\/1748-7188-1-18","volume":"1","author":"Almeida","year":"2006","ISSN":"https:\/\/id.crossref.org\/issn\/1748-7188","issn-type":"print"},{"key":"126_29733887","doi-asserted-by":"publisher","first-page":"393","DOI":"10.1186\/1471-2105-8-393","volume":"8","author":"Vinga","year":"2007","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"key":"127_34774692","doi-asserted-by":"publisher","first-page":"72","DOI":"10.1186\/1756-0500-2-72","volume":"2","author":"Fernandes","year":"2009","ISSN":"https:\/\/id.crossref.org\/issn\/1756-0500","issn-type":"print"},{"issue":"1","key":"129_35282379","doi-asserted-by":"publisher","first-page":"31","DOI":"10.1016\/j.biosystems.2009.07.001","volume":"98","author":"Marin","year":"2009","journal-title":"Biosystems","ISSN":"https:\/\/id.crossref.org\/issn\/1872-8324","issn-type":"print"},{"key":"130_46542304","doi-asserted-by":"crossref","first-page":"1615","DOI":"10.1021\/ci0600509","volume":"46","year":"2006","journal-title":"J CHEM INFORM MODEL"},{"key":"131_46542305","first-page":"2457","volume":"49","year":"2009","journal-title":"J CHEM INFORMMODEL"},{"key":"133_46542306","doi-asserted-by":"crossref","first-page":"47","DOI":"10.1109\/TCBB.2006.9","volume":"3","year":"2006","journal-title":"IEEEACM TRANS COMPUT BIOL BIOINF"},{"issue":"7","key":"134_41051333","doi-asserted-by":"publisher","first-page":"706","DOI":"10.1002\/gepi.20621","volume":"35","author":"Fan","year":"2011","journal-title":"Genetic epidemiology","ISSN":"https:\/\/id.crossref.org\/issn\/0741-0395","issn-type":"print"},{"key":"136_46542307","doi-asserted-by":"crossref","first-page":"678","DOI":"10.1109\/TIT.2009.2037044","volume":"56","year":"2010","journal-title":"IEEE TRANS INFORM THEORY"},{"key":"138_46542308","doi-asserted-by":"crossref","first-page":"89","DOI":"10.1016\/j.jfranklin.2003.12.009","volume":"341","year":"2004","journal-title":"J FRANKLIN INST ENG APPLIED MATH"},{"key":"140_46542309","doi-asserted-by":"crossref","first-page":"928","DOI":"10.1109\/TIT.2012.2219495","volume":"59","year":"2013","journal-title":"IEEE TRANS INFORM THEORY"},{"issue":"1","key":"141_38596288","doi-asserted-by":"publisher","first-page":"143","DOI":"10.1109\/TCBB.2009.1","volume":"8","author":"Gong","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/1545-5963","issn-type":"print"},{"issue":"2","key":"143_29797899","doi-asserted-by":"publisher","first-page":"331","DOI":"10.1016\/j.jtbi.2007.07.029","volume":"249","author":"Tlusty","year":"2007","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"issue":"3","key":"144_31650349","doi-asserted-by":"publisher","first-page":"191","DOI":"10.1016\/j.biosystems.2008.04.002","volume":"93","author":"Karafyllidis","year":"2008","journal-title":"Biosystems","ISSN":"https:\/\/id.crossref.org\/issn\/1872-8324","issn-type":"print"},{"key":"145_46542310","doi-asserted-by":"crossref","first-page":"62","DOI":"10.1109\/MEMB.2006.1578665","volume":"25","year":"2006","journal-title":"IEEE ENG MED BIOL MAGAZ"},{"issue":"2","key":"146_37107660","doi-asserted-by":"publisher","first-page":"123","DOI":"10.1080\/15257771003597766","volume":"29","author":"Liu","year":"2010","journal-title":"Nucleosides, nucleotides & nucleic acids","ISSN":"https:\/\/id.crossref.org\/issn\/1525-7770","issn-type":"print"},{"key":"148_46542311","doi-asserted-by":"crossref","first-page":"1033","DOI":"10.1038\/srep01033","volume":"3","year":"2013","ISSN":"https:\/\/id.crossref.org\/issn\/2045-2322","issn-type":"print"}],"container-title":["Briefings in Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/bib\/article-pdf\/15\/3\/376\/446993\/bbt068.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,8,4]],"date-time":"2020-08-04T10:29:37Z","timestamp":1596536977000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bib\/article-lookup\/doi\/10.1093\/bib\/bbt068"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013,9,20]]},"references-count":122,"journal-issue":{"issue":"3","published-online":{"date-parts":[[2014,5,12]]},"published-print":{"date-parts":[[2014,5,1]]}},"URL":"https:\/\/doi.org\/10.1093\/bib\/bbt068","relation":{},"ISSN":["1467-5463","1477-4054"],"issn-type":[{"value":"1467-5463","type":"print"},{"value":"1477-4054","type":"electronic"}],"subject":[],"published":{"date-parts":[[2013,9,20]]}}}