{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,1]],"date-time":"2026-02-01T02:12:20Z","timestamp":1769911940026,"version":"3.49.0"},"reference-count":52,"publisher":"Oxford University Press (OUP)","issue":"2","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Briefings in Bioinformatics"],"published-print":{"date-parts":[[2015,3,1]]},"DOI":"10.1093\/bib\/bbu011","type":"journal-article","created":{"date-parts":[[2014,4,3]],"date-time":"2014-04-03T02:04:43Z","timestamp":1396490683000},"page":"304-313","source":"Crossref","is-referenced-by-count":36,"title":["Genome-wide identification and predictive modeling of polyadenylation sites in eukaryotes"],"prefix":"10.1093","volume":"16","author":[{"given":"G.","family":"Ji","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"J.","family":"Guan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Y.","family":"Zeng","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Q. Q.","family":"Li","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"X.","family":"Wu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2014,4,1]]},"reference":[{"key":"1_44719195","doi-asserted-by":"crossref","first-page":"445","DOI":"10.1002\/wrna.59","volume":"2","year":"2011","journal-title":"WILEY INTERDISCIP REV RNA"},{"key":"2_46837231","doi-asserted-by":"crossref","first-page":"312","DOI":"10.1016\/j.tibs.2013.03.005","volume":"38","year":"2013","journal-title":"Trends in biochemical sciences","ISSN":"https:\/\/id.crossref.org\/issn\/0167-7640","issn-type":"print"},{"issue":"5740","key":"3_19386097","doi-asserted-by":"publisher","first-page":"1514","DOI":"10.1126\/science.1111443","volume":"309","author":"Moore","year":"2005","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"30","key":"4_40282036","doi-asserted-by":"publisher","first-page":"12533","DOI":"10.1073\/pnas.1019732108","volume":"108","year":"2011","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"key":"5_40297327","first-page":"97","volume":"469","year":"2010","journal-title":"Nature","ISSN":"https:\/\/id.crossref.org\/issn\/0028-0836","issn-type":"print"},{"issue":"6","key":"6_42258033","doi-asserted-by":"publisher","first-page":"1173","DOI":"10.1101\/gr.132563.111","volume":"22","year":"2012","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"10","key":"7_42888331","doi-asserted-by":"publisher","first-page":"2054","DOI":"10.1101\/gr.139733.112","volume":"22","year":"2012","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"3","key":"8_42827789","doi-asserted-by":"publisher","first-page":"277","DOI":"10.1016\/j.celrep.2012.01.001","volume":"1","author":"Smibert","year":"2012","ISSN":"https:\/\/id.crossref.org\/issn\/2211-1247","issn-type":"print"},{"issue":"9","key":"9_30895950","doi-asserted-by":"publisher","first-page":"3150","DOI":"10.1093\/nar\/gkn158","volume":"36","year":"2008","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"1","key":"10_31150815","doi-asserted-by":"publisher","first-page":"167","DOI":"10.1534\/genetics.108.088971","volume":"179","author":"Shen","year":"2008","journal-title":"Genetics","ISSN":"https:\/\/id.crossref.org\/issn\/0016-6731","issn-type":"print"},{"issue":"5990","key":"11_37387105","doi-asserted-by":"publisher","first-page":"432","DOI":"10.1126\/science.1191244","volume":"329","year":"2010","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"7265","key":"12_35660088","doi-asserted-by":"publisher","first-page":"814","DOI":"10.1038\/nature08390","volume":"461","author":"Ozsolak","year":"2009","journal-title":"Nature","ISSN":"https:\/\/id.crossref.org\/issn\/0028-0836","issn-type":"print"},{"issue":"6","key":"13_38908153","doi-asserted-by":"publisher","first-page":"1018","DOI":"10.1016\/j.cell.2010.11.020","volume":"143","author":"Ozsolak","year":"2010","journal-title":"Cell","ISSN":"https:\/\/id.crossref.org\/issn\/0092-8674","issn-type":"print"},{"issue":"5","key":"14_39665373","doi-asserted-by":"publisher","first-page":"741","DOI":"10.1101\/gr.115295.110","volume":"21","year":"2011","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"4","key":"15_39274550","doi-asserted-by":"publisher","first-page":"761","DOI":"10.1261\/rna.2581711","volume":"17","year":"2011","journal-title":"RNA","ISSN":"https:\/\/id.crossref.org\/issn\/1355-8382","issn-type":"print"},{"key":"16_46147693","doi-asserted-by":"crossref","first-page":"133","DOI":"10.1038\/nchembio.1406","volume":"10","year":"2013","ISSN":"https:\/\/id.crossref.org\/issn\/1548-7091","issn-type":"print"},{"issue":"13","key":"17_46028222","doi-asserted-by":"publisher","first-page":"i108","DOI":"10.1093\/bioinformatics\/btt233","volume":"29","year":"2013","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"1","key":"19_16459714","doi-asserted-by":"publisher","first-page":"135","DOI":"10.1016\/S0097-8485(96)80015-5","volume":"20","author":"Matis","year":"1996","journal-title":"Computers & chemistry","ISSN":"https:\/\/id.crossref.org\/issn\/0097-8485","issn-type":"print"},{"issue":"1","key":"20_16735737","doi-asserted-by":"publisher","first-page":"23","DOI":"10.1093\/bioinformatics\/13.1.23","volume":"13","author":"Salamov","year":"1997","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"key":"21_47670127","first-page":"23205","volume":"22","year":"2006","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"4","key":"22_39153366","doi-asserted-by":"publisher","first-page":"463","DOI":"10.1007\/s11517-011-0732-4","volume":"49","author":"Chang","year":"2011","journal-title":"Medical & biological engineering & computing","ISSN":"https:\/\/id.crossref.org\/issn\/0140-0118","issn-type":"print"},{"issue":"3","key":"23_37713841","doi-asserted-by":"publisher","first-page":"888","DOI":"10.1093\/nar\/27.3.888","volume":"27","year":"1999","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"8","key":"24_16996402","doi-asserted-by":"publisher","first-page":"1851","DOI":"10.1093\/nar\/30.8.1851","volume":"30","author":"Graber","year":"2002","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"11-12","key":"25_44081804","doi-asserted-by":"publisher","first-page":"895","DOI":"10.1007\/s00438-012-0725-5","volume":"287","author":"Wu","year":"2012","journal-title":"Molecular genetics and genomics : MGG","ISSN":"https:\/\/id.crossref.org\/issn\/1617-4615","issn-type":"print"},{"key":"26_23636631","doi-asserted-by":"publisher","first-page":"43","DOI":"10.1186\/1471-2105-8-43","volume":"8","author":"Ji","year":"2007","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"issue":"1-2","key":"27_10811968","doi-asserted-by":"publisher","first-page":"77","DOI":"10.1016\/S0378-1119(99)00104-3","volume":"231","author":"Tabaska","year":"1999","journal-title":"Gene","ISSN":"https:\/\/id.crossref.org\/issn\/0378-1119","issn-type":"print"},{"key":"28_35821443","first-page":"84","volume":"14","year":"2003","journal-title":"GENOME INFORM"},{"issue":"11","key":"29_18256816","doi-asserted-by":"publisher","first-page":"3392","DOI":"10.1093\/nar\/gkh656","volume":"32","author":"Hajarnavis","year":"2004","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"key":"30_47670128","doi-asserted-by":"crossref","first-page":"12398","DOI":"10.1016\/j.eswa.2011.04.019","volume":"38","year":"2011","ISSN":"https:\/\/id.crossref.org\/issn\/0957-4174","issn-type":"print"},{"issue":"3","key":"31_37464595","doi-asserted-by":"publisher","first-page":"287","DOI":"10.1016\/j.jtbi.2010.05.015","volume":"265","author":"Ji","year":"2010","journal-title":"Journal of Theoretical Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1095-8541","issn-type":"print"},{"key":"32_47125113","first-page":"S9","volume":"14","year":"2013","journal-title":"BMC bioinformatics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2105","issn-type":"print"},{"key":"33_47670129","doi-asserted-by":"crossref","first-page":"385","DOI":"10.1002\/wrna.116","volume":"3","year":"2012","journal-title":"WILEY INTERDISCIPL REV RNA"},{"issue":"3","key":"34_35696137","doi-asserted-by":"crossref","first-page":"135","DOI":"10.3233\/ISB-2009-0395","volume":"9","author":"Ahmed","year":"2009","journal-title":"In silico biology","ISSN":"https:\/\/id.crossref.org\/issn\/1386-6338","issn-type":"print"},{"issue":"1","key":"35_18618389","doi-asserted-by":"publisher","first-page":"201","DOI":"10.1093\/nar\/gki158","volume":"33","author":"Tian","year":"2005","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"12","key":"36_44013504","doi-asserted-by":"publisher","first-page":"2105","DOI":"10.1261\/rna.035899.112","volume":"18","year":"2012","journal-title":"RNA","ISSN":"https:\/\/id.crossref.org\/issn\/1355-8382","issn-type":"print"},{"issue":"8","key":"37_43275480","doi-asserted-by":"publisher","first-page":"845","DOI":"10.1038\/nsmb.2345","volume":"19","author":"Sherstnev","year":"2012","journal-title":"Nature structural & molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/1545-9993","issn-type":"print"},{"issue":"20","key":"38_46357916","doi-asserted-by":"publisher","first-page":"2564","DOI":"10.1093\/bioinformatics\/btt446","volume":"29","year":"2013","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"7","key":"39_37351427","doi-asserted-by":"publisher","first-page":"521","DOI":"10.1038\/nmeth.1464","volume":"7","author":"Ni","year":"2010","ISSN":"https:\/\/id.crossref.org\/issn\/1548-7091","issn-type":"print"},{"key":"40_38927338","doi-asserted-by":"publisher","first-page":"646","DOI":"10.1186\/1471-2164-11-646","volume":"11","author":"Akhtar","year":"2010","journal-title":"BMC genomics [electronic resource]","ISSN":"https:\/\/id.crossref.org\/issn\/1471-2164","issn-type":"print"},{"issue":"1","key":"41_41230162","doi-asserted-by":"publisher","first-page":"127","DOI":"10.1093\/bioinformatics\/btr602","volume":"28","year":"2012","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"13","key":"42_46028207","doi-asserted-by":"publisher","first-page":"i316","DOI":"10.1093\/bioinformatics\/btt218","volume":"29","year":"2013","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"6","key":"43_15826278","doi-asserted-by":"publisher","first-page":"597","DOI":"10.1093\/bioinformatics\/10.6.597","volume":"10","author":"Kondrakhin","year":"1994","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"key":"45_47569676","doi-asserted-by":"crossref","first-page":"534","DOI":"10.1038\/msb.2011.69","volume":"7","year":"2011","journal-title":"Molecular Systems Biology","ISSN":"https:\/\/id.crossref.org\/issn\/1744-4292","issn-type":"print"},{"issue":"7311","key":"46_38069478","doi-asserted-by":"publisher","first-page":"103","DOI":"10.1038\/nature09322","volume":"467","author":"Kertesz","year":"2010","journal-title":"Nature","ISSN":"https:\/\/id.crossref.org\/issn\/0028-0836","issn-type":"print"},{"issue":"1","key":"47_43300540","doi-asserted-by":"publisher","first-page":"69","DOI":"10.1016\/j.celrep.2011.10.002","volume":"1","author":"Li","year":"2012","ISSN":"https:\/\/id.crossref.org\/issn\/2211-1247","issn-type":"print"},{"key":"48_47670130","doi-asserted-by":"crossref","first-page":"696","DOI":"10.1038\/nature12756","volume":"505","year":"2014","journal-title":"Nature","ISSN":"https:\/\/id.crossref.org\/issn\/0028-0836","issn-type":"print"},{"issue":"3","key":"49_19256548","doi-asserted-by":"publisher","first-page":"1457","DOI":"10.1104\/pp.105.060541","volume":"138","year":"2005","journal-title":"Plant Physiology","ISSN":"https:\/\/id.crossref.org\/issn\/0032-0889","issn-type":"print"},{"issue":"9","key":"50_41669128","doi-asserted-by":"publisher","first-page":"e70","DOI":"10.1093\/nar\/gks048","volume":"40","year":"2012","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"8","key":"51_43476258","doi-asserted-by":"publisher","first-page":"e1002621","DOI":"10.1371\/journal.pcbi.1002621","volume":"8","author":"Thomas","year":"2012","ISSN":"https:\/\/id.crossref.org\/issn\/1553-734X","issn-type":"print"},{"issue":"5883","key":"52_31320749","doi-asserted-by":"publisher","first-page":"1643","DOI":"10.1126\/science.1155390","volume":"320","author":"Sandberg","year":"2008","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"2","key":"53_23502139","doi-asserted-by":"publisher","first-page":"156","DOI":"10.1101\/gr.5532707","volume":"17","year":"2007","journal-title":"Genome Research","ISSN":"https:\/\/id.crossref.org\/issn\/1088-9051","issn-type":"print"},{"issue":"1","key":"54_47078313","doi-asserted-by":"publisher","first-page":"9","DOI":"10.1073\/pnas.1321025111","volume":"111","year":"2014","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"}],"container-title":["Briefings in Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/bib\/article-pdf\/16\/2\/304\/682004\/bbu011.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,8,17]],"date-time":"2020-08-17T04:55:34Z","timestamp":1597640134000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bib\/article-lookup\/doi\/10.1093\/bib\/bbu011"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014,4,1]]},"references-count":52,"journal-issue":{"issue":"2","published-online":{"date-parts":[[2015,3,18]]},"published-print":{"date-parts":[[2015,3,1]]}},"URL":"https:\/\/doi.org\/10.1093\/bib\/bbu011","relation":{},"ISSN":["1467-5463","1477-4054"],"issn-type":[{"value":"1467-5463","type":"print"},{"value":"1477-4054","type":"electronic"}],"subject":[],"published":{"date-parts":[[2014,4,1]]}}}