{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,22]],"date-time":"2025-02-22T00:45:48Z","timestamp":1740185148737,"version":"3.37.3"},"reference-count":9,"publisher":"Oxford University Press (OUP)","issue":"12","license":[{"start":{"date-parts":[[2020,4,16]],"date-time":"2020-04-16T00:00:00Z","timestamp":1586995200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/open_access\/funder_policies\/chorus\/standard_publication_model"}],"funder":[{"DOI":"10.13039\/100000002","name":"National Institutes of Health","doi-asserted-by":"publisher","award":["P01AG051449","P50GM107632","U24CA210972"],"award-info":[{"award-number":["P01AG051449","P50GM107632","U24CA210972"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2020,6,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Motivation<\/jats:title>\n                  <jats:p>Retrotransposition is an important force in shaping the human genome and is involved in prenatal development, disease and aging. Current genome browsers are not optimized for visualizing the experimental evidence for retrotransposon insertions.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Results<\/jats:title>\n                  <jats:p>We have developed a specialized browser to visualize the evidence for retrotransposon insertions for both targeted and whole-genome sequencing data.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and implementation<\/jats:title>\n                  <jats:p>TranspoScope\u2019s source code, as well as installation instructions, are available at https:\/\/github.com\/FenyoLab\/transposcope.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/btaa244","type":"journal-article","created":{"date-parts":[[2020,4,9]],"date-time":"2020-04-09T19:14:39Z","timestamp":1586459679000},"page":"3877-3878","source":"Crossref","is-referenced-by-count":0,"title":["TranspoScope: interactive visualization of retrotransposon insertions"],"prefix":"10.1093","volume":"36","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-8156-7153","authenticated-orcid":false,"given":"Mark","family":"Grivainis","sequence":"first","affiliation":[{"name":"Institute for Systems Genetics"},{"name":"Department of Biochemistry and Molecular Pharmacology , NYU School of Medicine, 550 1st Ave, New York, NY 10016, USA"}]},{"given":"Zuojian","family":"Tang","sequence":"additional","affiliation":[{"name":"Institute for Systems Genetics"},{"name":"Department of Biochemistry and Molecular Pharmacology , NYU School of Medicine, 550 1st Ave, New York, NY 10016, USA"}]},{"given":"David","family":"Feny\u00f6","sequence":"additional","affiliation":[{"name":"Institute for Systems Genetics"},{"name":"Department of Biochemistry and Molecular Pharmacology , NYU School of Medicine, 550 1st Ave, New York, NY 10016, USA"}]}],"member":"286","published-online":{"date-parts":[[2020,4,16]]},"reference":[{"key":"2023063011301198800_btaa244-B1","doi-asserted-by":"crossref","first-page":"5280","DOI":"10.1073\/pnas.0831042100","article-title":"Hot L1s account for the bulk of retrotransposition in the human population","volume":"100","author":"Brouha","year":"2003","journal-title":"Proc. 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