{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,20]],"date-time":"2026-03-20T04:46:25Z","timestamp":1773981985097,"version":"3.50.1"},"reference-count":9,"publisher":"Oxford University Press (OUP)","issue":"13","license":[{"start":{"date-parts":[[2020,5,14]],"date-time":"2020-05-14T00:00:00Z","timestamp":1589414400000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100000923","name":"Australian Research Council","doi-asserted-by":"publisher","award":["ARC DP190103705"],"award-info":[{"award-number":["ARC DP190103705"]}],"id":[{"id":"10.13039\/501100000923","id-type":"DOI","asserted-by":"publisher"}]},{"name":"ARC DECRA fellow","award":["DE190101069"],"award-info":[{"award-number":["DE190101069"]}]},{"name":"ARC Future Fellow","award":["FT170100448"],"award-info":[{"award-number":["FT170100448"]}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2020,7,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:sec>\n                  <jats:title>Motivation<\/jats:title>\n                  <jats:p>genozip is a new lossless compression tool for Variant Call Format (VCF) files. By applying field-specific algorithms and fully utilizing the available computational hardware, genozip achieves the highest compression ratios amongst existing lossless compression tools known to the authors, at speeds comparable with the fastest multi-threaded compressors.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Availability and implementation<\/jats:title>\n                  <jats:p>genozip is freely available to non-commercial users. It can be installed via conda-forge, Docker Hub, or downloaded from github.com\/divonlan\/genozip.<\/jats:p>\n               <\/jats:sec>\n               <jats:sec>\n                  <jats:title>Supplementary information<\/jats:title>\n                  <jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p>\n               <\/jats:sec>","DOI":"10.1093\/bioinformatics\/btaa290","type":"journal-article","created":{"date-parts":[[2020,4,27]],"date-time":"2020-04-27T19:38:42Z","timestamp":1588016322000},"page":"4091-4092","source":"Crossref","is-referenced-by-count":19,"title":["genozip: a fast and efficient compression tool for VCF files"],"prefix":"10.1093","volume":"36","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-9794-6825","authenticated-orcid":false,"given":"Divon","family":"Lan","sequence":"first","affiliation":[{"name":"School of Biological Sciences , The Environment Institute, Faculty of Sciences, The University of Adelaide, Adelaide, SA 5005, Australia"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4603-1473","authenticated-orcid":false,"given":"Raymond","family":"Tobler","sequence":"additional","affiliation":[{"name":"School of Biological Sciences , The Environment Institute, Faculty of Sciences, The University of Adelaide, Adelaide, SA 5005, Australia"}]},{"given":"Yassine","family":"Souilmi","sequence":"additional","affiliation":[{"name":"School of Biological Sciences , The Environment Institute, Faculty of Sciences, The University of Adelaide, Adelaide, SA 5005, Australia"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5550-9176","authenticated-orcid":false,"given":"Bastien","family":"Llamas","sequence":"additional","affiliation":[{"name":"School of Biological Sciences , The Environment Institute, Faculty of Sciences, The University of Adelaide, Adelaide, SA 5005, Australia"}]}],"member":"286","published-online":{"date-parts":[[2020,5,14]]},"reference":[{"key":"2023062312032459400_btaa290-B1","author":"Collin","year":"2011"},{"key":"2023062312032459400_btaa290-B2","doi-asserted-by":"crossref","first-page":"2156","DOI":"10.1093\/bioinformatics\/btr330","article-title":"The variant call format and VCFtools","volume":"27","author":"Danecek","year":"2011","journal-title":"Bioinformatics"},{"key":"2023062312032459400_btaa290-B3","doi-asserted-by":"crossref","first-page":"1834","DOI":"10.1093\/bioinformatics\/bty023","article-title":"GTC: how to maintain huge genotype collections in a compressed form","volume":"34","author":"Danek","year":"2018","journal-title":"Bioinformatics"},{"key":"2023062312032459400_btaa290-B4","doi-asserted-by":"crossref","first-page":"4791","DOI":"10.1093\/bioinformatics\/btz508","article-title":"GTShark: genotype compression in large projects","volume":"35","author":"Deorowicz","year":"2019","journal-title":"Bioinformatics"},{"key":"2023062312032459400_btaa290-B5","doi-asserted-by":"crossref","first-page":"1266","DOI":"10.1093\/bioinformatics\/btu014","article-title":"Efficient haplotype matching and storage using the positional Burrows\u2013Wheeler transform (PBWT)","volume":"30","author":"Durbin","year":"2014","journal-title":"Bioinformatics"},{"key":"2023062312032459400_btaa290-B6","first-page":"121","article-title":"Curl: a gentle slope language for the Web","volume":"2","author":"Hostetter","year":"1997","journal-title":"World Wide Web J. 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