{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,26]],"date-time":"2026-02-26T20:34:06Z","timestamp":1772138046898,"version":"3.50.1"},"reference-count":8,"publisher":"Oxford University Press (OUP)","issue":"1","license":[{"start":{"date-parts":[[2021,7,16]],"date-time":"2021-07-16T00:00:00Z","timestamp":1626393600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/open_access\/funder_policies\/chorus\/standard_publication_model"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2021,12,22]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:sec>\n                    <jats:title>Motivation<\/jats:title>\n                    <jats:p>Knowledge curation from the biomedical literature is very valuable but can be a repetitive and laborious process. The paucity of user-friendly tools is one of the reasons for the lack of widespread adoption of good biomedical knowledge curation practices.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Results<\/jats:title>\n                    <jats:p>Here, we present Ontoclick, a web browser extension that streamlines the process of annotating a text span with a relevant ontology term. We hope this tool will make biocuration more accessible to a wider audience of biomedical researchers.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Availability and implementation<\/jats:title>\n                    <jats:p>Ontoclick is freely available under the GPL-3.0 license on the Chrome Web Store and on the Mozilla Add-Ons for Firefox Store. Source code and documentation are available at: https:\/\/github.com\/azankl\/Ontoclick.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.1093\/bioinformatics\/btab520","type":"journal-article","created":{"date-parts":[[2021,7,14]],"date-time":"2021-07-14T07:11:51Z","timestamp":1626246711000},"page":"301-302","source":"Crossref","is-referenced-by-count":0,"title":["Ontoclick: a web browser extension to facilitate biomedical knowledge curation"],"prefix":"10.1093","volume":"38","author":[{"given":"Anthony","family":"Xu","sequence":"first","affiliation":[{"name":"School of Computer Science and Engineering, UNSW , Sydney, NSW 2052, Australia"}]},{"given":"Aravind","family":"Venkateswaran","sequence":"additional","affiliation":[{"name":"School of Computer Science and Engineering, UNSW , Sydney, NSW 2052, Australia"}]},{"given":"Lianguizi","family":"Zhou","sequence":"additional","affiliation":[{"name":"School of Computer Science and Engineering, UNSW , Sydney, NSW 2052, Australia"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8612-1062","authenticated-orcid":false,"given":"Andreas","family":"Zankl","sequence":"additional","affiliation":[{"name":"Department of Clinical Genetics, The Children\u2019s Hospital at Westmead , Sydney, NSW 2145, Australia"},{"name":"Faculty of Medicine and Health, The University of Sydney , Sydney, NSW 2006, Australia"},{"name":"Bone Biology Division and Kinghorn Centre for Clinical Genomics, Garvan Institute of Medical Research , Sydney, NSW 2010, Australia"}]}],"member":"286","published-online":{"date-parts":[[2021,7,16]]},"reference":[{"key":"2023020108385808500_btab520-B1","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1038\/75556","article-title":"Gene ontology: tool for the unification of biology. The gene ontology consortium","volume":"25","author":"Ashburner","year":"2000","journal-title":"Nat. Genet"},{"key":"2023020108385808500_btab520-B2","doi-asserted-by":"crossref","first-page":"D325","DOI":"10.1093\/nar\/gkaa1113","article-title":"The gene ontology resource: enriching a GOld mine","volume":"49","year":"2021","journal-title":"Nucleic Acids Res"},{"key":"2023020108385808500_btab520-B3","author":"Jupp","year":"2015"},{"key":"2023020108385808500_btab520-B4","doi-asserted-by":"crossref","first-page":"D865","DOI":"10.1093\/nar\/gkw1039","article-title":"The human phenotype ontology in 2017","volume":"45","author":"K\u00f6hler","year":"2017","journal-title":"Nucleic Acids Res"},{"key":"2023020108385808500_btab520-B5","doi-asserted-by":"crossref","first-page":"D1207","DOI":"10.1093\/nar\/gkaa1043","article-title":"The human phenotype ontology in 2021","volume":"49","author":"K\u00f6hler","year":"2021","journal-title":"Nucleic Acids Res"},{"key":"2023020108385808500_btab520-B6","doi-asserted-by":"crossref","first-page":"D712","DOI":"10.1093\/nar\/gkw1128","article-title":"The monarch initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species","volume":"45","author":"Mungall","year":"2017","journal-title":"Nucleic Acids Res"},{"key":"2023020108385808500_btab520-B7","doi-asserted-by":"crossref","first-page":"190","DOI":"10.1136\/amiajnl-2011-000523","article-title":"The national center for biomedical ontology","volume":"19","author":"Musen","year":"2012","journal-title":"J. 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Assoc"},{"key":"2023020108385808500_btab520-B8","doi-asserted-by":"crossref","first-page":"D955","DOI":"10.1093\/nar\/gky1032","article-title":"Human disease ontology 2018 update: classification, content and workflow expansion","volume":"47","author":"Schriml","year":"2019","journal-title":"Nucleic Acids Res"}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/bioinformatics\/advance-article-pdf\/doi\/10.1093\/bioinformatics\/btab520\/39555245\/btab520.pdf","content-type":"application\/pdf","content-version":"am","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/38\/1\/301\/49006257\/btab520.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/38\/1\/301\/49006257\/btab520.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,2,1]],"date-time":"2023-02-01T14:54:16Z","timestamp":1675263256000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/38\/1\/301\/6322981"}},"subtitle":[],"editor":[{"given":"Janet","family":"Kelso","sequence":"additional","affiliation":[]}],"short-title":[],"issued":{"date-parts":[[2021,7,16]]},"references-count":8,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2021,12,22]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/btab520","relation":{"has-preprint":[{"id-type":"doi","id":"10.1101\/2021.03.04.433993","asserted-by":"object"}]},"ISSN":["1367-4803","1367-4811"],"issn-type":[{"value":"1367-4803","type":"print"},{"value":"1367-4811","type":"electronic"}],"subject":[],"published-other":{"date-parts":[[2022,1,1]]},"published":{"date-parts":[[2021,7,16]]}}}