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FindNonCoding takes a pattern mining approach to capture the essential sequence motifs and hairpin loops representing a non-coding RNA family and quickly identify matches in genomes. FindNonCoding was designed for ease of use and accurately finds non-coding RNAs with a low false discovery rate.<\/jats:p><\/jats:sec><jats:sec><jats:title>Availability and implementation<\/jats:title><jats:p>FindNonCoding is implemented within the DECIPHER package (v2.19.3) for R (v4.1) available from Bioconductor. Pre-trained models of common non-coding RNA families are included for bacteria, archaea and eukarya.<\/jats:p><\/jats:sec><jats:sec><jats:title>Supplementary information<\/jats:title><jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p><\/jats:sec>","DOI":"10.1093\/bioinformatics\/btab708","type":"journal-article","created":{"date-parts":[[2021,10,8]],"date-time":"2021-10-08T14:31:45Z","timestamp":1633703505000},"page":"841-843","source":"Crossref","is-referenced-by-count":1,"title":["FindNonCoding: rapid and simple detection of non-coding RNAs in genomes"],"prefix":"10.1093","volume":"38","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-1457-4019","authenticated-orcid":false,"given":"Erik S","family":"Wright","sequence":"first","affiliation":[{"name":"Department of Biomedical Informatics, University of Pittsburgh , Pittsburgh, PA 15219, 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