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Here, we present CNpare, which identifies similar cell line models based on genome-wide DNA copy number.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Availability and implementation<\/jats:title>\n                    <jats:p>CNpare is available as an R package at https:\/\/github.com\/macintyrelab\/CNpare. All analysis performed in the manuscript can be reproduced via the code found at https:\/\/github.com\/macintyrelab\/CNpare_analyses.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Supplementary information<\/jats:title>\n                    <jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.1093\/bioinformatics\/btac371","type":"journal-article","created":{"date-parts":[[2022,5,31]],"date-time":"2022-05-31T20:43:06Z","timestamp":1654029786000},"page":"3638-3641","source":"Crossref","is-referenced-by-count":4,"title":["CNpare: matching DNA copy number profiles"],"prefix":"10.1093","volume":"38","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-3879-454X","authenticated-orcid":false,"given":"Blas","family":"Chaves-Urbano","sequence":"first","affiliation":[{"name":"Computational Oncology Group, Spanish National Cancer Research Centre (CNIO) , 28029 Madrid, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Barbara","family":"Hernando","sequence":"additional","affiliation":[{"name":"Computational Oncology Group, Spanish National Cancer Research Centre (CNIO) , 28029 Madrid, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Maria J","family":"Garcia","sequence":"additional","affiliation":[{"name":"Computational Oncology Group, Spanish National Cancer Research Centre (CNIO) , 28029 Madrid, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3906-467X","authenticated-orcid":false,"given":"Geoff","family":"Macintyre","sequence":"additional","affiliation":[{"name":"Computational Oncology Group, Spanish National Cancer Research Centre (CNIO) , 28029 Madrid, Spain"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2022,5,31]]},"reference":[{"key":"2023041405361384300_","doi-asserted-by":"crossref","first-page":"325","DOI":"10.1038\/s41586-018-0409-3","article-title":"Genetic and transcriptional evolution alters cancer cell line drug response","volume":"560","author":"Ben-David","year":"2018","journal-title":"Nature"},{"key":"2023041405361384300_","doi-asserted-by":"crossref","first-page":"7398","DOI":"10.1158\/0008-5472.CAN-11-2427","article-title":"A framework to select clinically relevant cancer cell lines for investigation by establishing their molecular similarity with primary human cancers","volume":"71","author":"Dancik","year":"2011","journal-title":"Cancer Res"},{"key":"2023041405361384300_","doi-asserted-by":"crossref","first-page":"2126","DOI":"10.1038\/ncomms3126","article-title":"Evaluating cell lines as tumour models by comparison of genomic profiles","volume":"4","author":"Domcke","year":"2013","journal-title":"Nat. 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