{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,6]],"date-time":"2025-11-06T06:21:06Z","timestamp":1762410066947,"version":"3.37.3"},"reference-count":11,"publisher":"Oxford University Press (OUP)","issue":"16","license":[{"start":{"date-parts":[[2022,7,4]],"date-time":"2022-07-04T00:00:00Z","timestamp":1656892800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/academic.oup.com\/journals\/pages\/open_access\/funder_policies\/chorus\/standard_publication_model"}],"funder":[{"DOI":"10.13039\/501100001659","name":"Deutsche Forschungsgemeinschaft","doi-asserted-by":"crossref","award":["431572533"],"award-info":[{"award-number":["431572533"]}],"id":[{"id":"10.13039\/501100001659","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2022,8,10]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:sec><jats:title>Summary<\/jats:title><jats:p>We present MobilityTransformR, an R\/Bioconductor package for the effective mobility scaling of capillary zone electrophoresis-mass spectrometry (CE-MS) data. It uses functionality from different R packages that are frequently used for data processing and analysis in MS-based metabolomics workflows, allowing the subsequent use of reproducible transformed CE-MS data in existing workflows.<\/jats:p><\/jats:sec><jats:sec><jats:title>Availability and implementation<\/jats:title><jats:p>MobilityTransformR is implemented in R (Version &amp;gt;= 4.2) and can be downloaded directly from the Bioconductor database (https:\/\/bioconductor.org\/packages\/MobilityTransformR) or GitHub (https:\/\/github.com\/LiesaSalzer\/MobilityTransformR).<\/jats:p><\/jats:sec><jats:sec><jats:title>Supplementary information<\/jats:title><jats:p>Supplementary data are available at Bioinformatics online.<\/jats:p><\/jats:sec>","DOI":"10.1093\/bioinformatics\/btac441","type":"journal-article","created":{"date-parts":[[2022,7,4]],"date-time":"2022-07-04T14:39:28Z","timestamp":1656945568000},"page":"4044-4045","source":"Crossref","is-referenced-by-count":5,"title":["MobilityTransformR: an R package for effective mobility transformation of CE-MS data"],"prefix":"10.1093","volume":"38","author":[{"ORCID":"https:\/\/orcid.org\/0000-0003-0761-0656","authenticated-orcid":false,"given":"Liesa","family":"Salzer","sequence":"first","affiliation":[{"name":"Research Unit Analytical BioGeoChemistry, Helmholtz Zentrum M\u00fcnchen , D-85764 Neuherberg, Germany"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1462-4426","authenticated-orcid":false,"given":"Michael","family":"Witting","sequence":"additional","affiliation":[{"name":"Chair of Analytical Food Chemistry, TUM School of Life Sciences, Technical University of Munich , D-85354 Freising, Germany"},{"name":"Metabolomics and Proteomics Core, Helmholtz Zentrum M\u00fcnchen , D-85764 Neuherberg, Germany"}]},{"given":"Philippe","family":"Schmitt-Kopplin","sequence":"additional","affiliation":[{"name":"Research Unit Analytical BioGeoChemistry, Helmholtz Zentrum M\u00fcnchen , D-85764 Neuherberg, Germany"},{"name":"Chair of Analytical Food Chemistry, TUM School of Life Sciences, Technical University of Munich , D-85354 Freising, Germany"}]}],"member":"286","published-online":{"date-parts":[[2022,7,4]]},"reference":[{"key":"2023041408494156400_","article-title":"A mature ROMANCE: a matter of quantity and how two can be better than one","author":"Codesido","year":"2020","journal-title":"ChemRxiv"},{"key":"2023041408494156400_","doi-asserted-by":"crossref","first-page":"1875","DOI":"10.1002\/elps.202000333","article-title":"New insights into the conversion of electropherograms to the effective electrophoretic mobility scale","volume":"42","author":"Codesido","year":"2021","journal-title":"Electrophoresis"},{"key":"2023041408494156400_","doi-asserted-by":"crossref","first-page":"1237","DOI":"10.1002\/elps.200500724","article-title":"Development of a capillary electrophoretic method for the analysis of low-molecular-weight amines from metal working fluid aerosols and ambient air","volume":"27","author":"Fekete","year":"2006","journal-title":"Electrophoresis"},{"key":"2023041408494156400_","doi-asserted-by":"crossref","first-page":"1063","DOI":"10.1021\/acs.jproteome.0c00313","article-title":"MSnbase: efficient and elegant R-Based processing and visualization of raw mass spectrometry data","volume":"20","author":"Gatto","year":"2021","journal-title":"J. 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