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The RALEE (RNA ALignment Editor in Emacs) tool provides a simple environment for RNA multiple sequence alignment editing, including structure-specific colour schemes, utilizing helper applications for structure prediction and many more conventional editing functions. This is accomplished by extending the commonly used text editor, Emacs, which is available for Linux, most UNIX systems, Windows and Mac OS.<\/jats:p><jats:p>Availability: The ELISP source code for RALEE is freely available from http:\/\/www.sanger.ac.uk\/Users\/sgj\/ralee\/ along with documentation and examples.<\/jats:p><jats:p>Contact: \u00a0sgj@sanger.ac.uk<\/jats:p>","DOI":"10.1093\/bioinformatics\/bth489","type":"journal-article","created":{"date-parts":[[2004,9,18]],"date-time":"2004-09-18T00:13:19Z","timestamp":1095466399000},"page":"257-259","source":"Crossref","is-referenced-by-count":107,"title":["RALEE\u2014RNA ALignment Editor in Emacs"],"prefix":"10.1093","volume":"21","author":[{"given":"Sam","family":"Griffiths-Jones","sequence":"first","affiliation":[{"name":"The Wellcome Trust Sanger Institute Wellcome Trust Genome Campus, Hinxton, CAMBS, CB10 1SA, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2004,9,17]]},"reference":[{"key":"2023013107193363200_B1","doi-asserted-by":"crossref","unstructured":"Clamp, M., Cuff, J., Searle, S.M., Barton, G.J. 2004The Jalview Java alignment editor. 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