{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,17]],"date-time":"2026-06-17T01:51:02Z","timestamp":1781661062681,"version":"3.54.5"},"reference-count":20,"publisher":"Oxford University Press (OUP)","issue":"3","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2005,2,1]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: The reconstruction of population processes from DNA sequence variation requires the coordinated implementation of several coalescent-based methods, each bound by specific assumptions and limitations. In practice, the application of these coalescent-based methods for parameter estimation is difficult because they make strict assumptions that must be verified a priori and their parameter-rich nature makes the estimation of all model parameters very complex and computationally intensive. A further complication is their distribution as console applications that require the user to navigate through console menus or specify complex command-line arguments. To facilitate the implementation of these coalescent-based tools we developed SNAP Workbench, a Java program that manages and coordinates a series of programs. The workbench enhances population parameter estimation by ensuring that the assumptions and program limitations of each method are met and by providing a step-by-step methodology for examining population processes that integrates both summary-statistic methods and coalescent-based population genetic models.<\/jats:p>\n               <jats:p>Availability: SNAP Workbench is freely available at http:\/\/snap.cifr.ncsu.edu. The workbench and tools can be downloaded for Mac, Windows and Unix operating systems. Each package includes installation instructions, program documentation and a sample dataset.<\/jats:p>\n               <jats:p>Contact: \u00a0ignazio_carbone@ncsu.edu<\/jats:p>\n               <jats:p>Supplementary information: A description of system requirements and installation instructions can be found at http:\/\/snap.cifr.ncsu.edu<\/jats:p>","DOI":"10.1093\/bioinformatics\/bti003","type":"journal-article","created":{"date-parts":[[2004,9,8]],"date-time":"2004-09-08T01:32:51Z","timestamp":1094607171000},"page":"402-404","source":"Crossref","is-referenced-by-count":113,"title":["SNAP: workbench management tool for evolutionary population genetic analysis"],"prefix":"10.1093","volume":"21","author":[{"given":"Eric W.","family":"Price","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ignazio","family":"Carbone","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2004,9,7]]},"reference":[{"key":"2023051305563145900_B1","unstructured":"Bahlo, M. and Griffiths, R.C. 2000Inference from gene trees in a subdivided population. 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