{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,17]],"date-time":"2026-06-17T22:16:14Z","timestamp":1781734574137,"version":"3.54.5"},"reference-count":35,"publisher":"Oxford University Press (OUP)","issue":"14","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Bioinformatics"],"published-print":{"date-parts":[[2005,7,15]]},"DOI":"10.1093\/bioinformatics\/bti490","type":"journal-article","created":{"date-parts":[[2005,5,13]],"date-time":"2005-05-13T00:24:40Z","timestamp":1115943880000},"page":"3074-3081","source":"Crossref","is-referenced-by-count":146,"title":["Cis-regulatory element based targeted gene finding: genome-wide identification of abscisic acid- and abiotic stress-responsive genes in Arabidopsis thaliana"],"prefix":"10.1093","volume":"21","author":[{"given":"W.","family":"Zhang","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"J.","family":"Ruan","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"T.-h. D.","family":"Ho","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Y.","family":"You","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"T.","family":"Yu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"R. S.","family":"Quatrano","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2005,5,12]]},"reference":[{"issue":"5556","key":"2_16897402","doi-asserted-by":"publisher","first-page":"813","DOI":"10.1126\/science.1066355","volume":"295","author":"Brivanlou","year":"2002","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"12","key":"3_16654021","doi-asserted-by":"publisher","first-page":"2261","DOI":"10.1105\/tpc.9.12.2261","volume":"9","author":"Busk","year":"1997","journal-title":"The Plant Cell Online","ISSN":"https:\/\/id.crossref.org\/issn\/1040-4651","issn-type":"print"},{"issue":"6","key":"4_16848180","doi-asserted-by":"publisher","first-page":"1285","DOI":"10.1046\/j.1365-313X.1997.11061285.x","volume":"11","author":"Busk","year":"1997","journal-title":"The Plant journal : for cell and molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0960-7412","issn-type":"print"},{"issue":"3","key":"5_17044210","doi-asserted-by":"publisher","first-page":"373","DOI":"10.1046\/j.1365-313X.2002.01295.x","volume":"30","author":"Carles","year":"2002","journal-title":"The Plant journal : for cell and molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0960-7412","issn-type":"print"},{"issue":"3","key":"6_6436377","doi-asserted-by":"publisher","first-page":"1723","DOI":"10.1074\/jbc.275.3.1723","volume":"275","author":"Choi","year":"2000","journal-title":"Journal of Biological Chemistry","ISSN":"https:\/\/id.crossref.org\/issn\/0021-9258","issn-type":"print"},{"issue":"4978","key":"8_9195491","doi-asserted-by":"publisher","first-page":"267","DOI":"10.1126\/science.2145628","volume":"250","author":"Guiltinan","year":"1990","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"7004","key":"9_18307361","doi-asserted-by":"publisher","first-page":"99","DOI":"10.1038\/nature02800","volume":"431","author":"Harbison","year":"2004","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"6","key":"10_15927923","doi-asserted-by":"publisher","first-page":"913","DOI":"10.1046\/j.1365-313X.1995.07060913.x","volume":"7","author":"Hattori","year":"1995","journal-title":"The Plant journal : for cell and molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0960-7412","issn-type":"print"},{"issue":"1","key":"11_16901434","doi-asserted-by":"publisher","first-page":"136","DOI":"10.1093\/pcp\/pcf014","volume":"43","author":"Hattori","year":"2002","journal-title":"Plant and Cell Physiology","ISSN":"https:\/\/id.crossref.org\/issn\/0032-0781","issn-type":"print"},{"issue":"1","key":"12_37744999","doi-asserted-by":"publisher","first-page":"297","DOI":"10.1093\/nar\/27.1.297","volume":"27","year":"1999","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"6","key":"13_6377353","doi-asserted-by":"publisher","first-page":"679","DOI":"10.1046\/j.1365-313x.1999.00565.x","volume":"19","author":"Hobo","year":"1999","journal-title":"The Plant journal : for cell and molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0960-7412","issn-type":"print"},{"key":"14_28577557","doi-asserted-by":"crossref","first-page":"4891","DOI":"10.1242\/jcs.00175","volume":"115","year":"2002","journal-title":"Journal of Cell Science","ISSN":"https:\/\/id.crossref.org\/issn\/0021-9533","issn-type":"print"},{"issue":"5","key":"15_6525159","doi-asserted-by":"publisher","first-page":"1205","DOI":"10.1006\/jmbi.2000.3519","volume":"296","author":"Hughes","year":"2000","journal-title":"Journal of molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0022-2836","issn-type":"print"},{"issue":"4","key":"16_17372529","doi-asserted-by":"publisher","first-page":"2129","DOI":"10.1104\/pp.008532","volume":"130","author":"Kreps","year":"2002","journal-title":"Plant Physiology","ISSN":"https:\/\/id.crossref.org\/issn\/0032-0889","issn-type":"print"},{"issue":"6822","key":"17_11058770","doi-asserted-by":"publisher","first-page":"860","DOI":"10.1038\/35057062","volume":"409","author":"Lander","year":"2001","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"1","key":"18_11453869","doi-asserted-by":"publisher","first-page":"325","DOI":"10.1093\/nar\/30.1.325","volume":"30","author":"Lescot","year":"2002","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"10","key":"19_9365912","doi-asserted-by":"publisher","first-page":"969","DOI":"10.1105\/tpc.1.10.969","volume":"1","author":"Marcotte Jr","year":"1989","journal-title":"The Plant Cell Online","ISSN":"https:\/\/id.crossref.org\/issn\/1040-4651","issn-type":"print"},{"key":"20_28577558","first-page":"763","volume":"22","year":"2002","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"1","key":"21_17466564","doi-asserted-by":"publisher","first-page":"374","DOI":"10.1093\/nar\/gkg108","volume":"31","author":"Matys","year":"2003","journal-title":"Nucleic Acids Research","ISSN":"https:\/\/id.crossref.org\/issn\/0305-1048","issn-type":"print"},{"issue":"4","key":"22_5548443","doi-asserted-by":"publisher","first-page":"1406","DOI":"10.1073\/pnas.87.4.1406","volume":"87","author":"Mundy","year":"1990","journal-title":"PNAS","ISSN":"https:\/\/id.crossref.org\/issn\/0027-8424","issn-type":"print"},{"issue":"2","key":"23_17585369","doi-asserted-by":"publisher","first-page":"137","DOI":"10.1046\/j.1365-313X.2003.01708.x","volume":"34","author":"Narusaka","year":"2003","journal-title":"The Plant journal : for cell and molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0960-7412","issn-type":"print"},{"issue":"7","key":"24_23308236","doi-asserted-by":"crossref","first-page":"1793","DOI":"10.1002\/j.1460-2075.1991.tb07704.x","volume":"10","author":"Oeda","year":"1991","journal-title":"The EMBO Journal","ISSN":"https:\/\/id.crossref.org\/issn\/0261-4189","issn-type":"print"},{"issue":"2","key":"25_16475763","doi-asserted-by":"publisher","first-page":"483","DOI":"10.1104\/pp.112.2.483","volume":"112","author":"Ono","year":"1996","journal-title":"Plant Physiology","ISSN":"https:\/\/id.crossref.org\/issn\/0032-0889","issn-type":"print"},{"issue":"6","key":"26_17340117","doi-asserted-by":"publisher","first-page":"282","DOI":"10.1007\/s10142-002-0070-6","volume":"2","author":"Seki","year":"2002","journal-title":"Functional & integrative genomics","ISSN":"https:\/\/id.crossref.org\/issn\/1438-793X","issn-type":"print"},{"issue":"3","key":"27_17183529","doi-asserted-by":"publisher","first-page":"279","DOI":"10.1046\/j.1365-313X.2002.01359.x","volume":"31","author":"Seki","year":"2002","journal-title":"The Plant journal : for cell and molecular biology","ISSN":"https:\/\/id.crossref.org\/issn\/0960-7412","issn-type":"print"},{"key":"28_28577559","doi-asserted-by":"crossref","first-page":"653","DOI":"10.1111\/j.1399-3054.1997.tb01050.x","volume":"101","year":"1997","journal-title":"Physiologia Plantarum (Copenhagen. 1948)","ISSN":"https:\/\/id.crossref.org\/issn\/1399-3054","issn-type":"print"},{"issue":"7","key":"29_16307501","doi-asserted-by":"publisher","first-page":"1107","DOI":"10.1105\/tpc.8.7.1107","volume":"8","author":"Shen","year":"1996","journal-title":"The Plant Cell Online","ISSN":"https:\/\/id.crossref.org\/issn\/1040-4651","issn-type":"print"},{"issue":"3","key":"30_10341235","doi-asserted-by":"crossref","first-page":"217","DOI":"10.1016\/S1369-5266(00)80068-0","volume":"3","author":"Shinozaki","year":"2000","journal-title":"Current opinion in plant biology","ISSN":"https:\/\/id.crossref.org\/issn\/1369-5266","issn-type":"print"},{"issue":"1","key":"31_10316356","doi-asserted-by":"publisher","first-page":"16","DOI":"10.1093\/bioinformatics\/16.1.16","volume":"16","author":"Stormo","year":"2000","journal-title":"Bioinformatics","ISSN":"https:\/\/id.crossref.org\/issn\/1367-4803","issn-type":"print"},{"issue":"6814","key":"32_10602333","doi-asserted-by":"publisher","first-page":"796","DOI":"10.1038\/35048692","volume":"408","year":"2000","journal-title":"Nature; Physical Science (London)","ISSN":"https:\/\/id.crossref.org\/issn\/1476-4687","issn-type":"print"},{"issue":"6","key":"33_18209521","doi-asserted-by":"publisher","first-page":"757","DOI":"10.1016\/j.devcel.2004.05.004","volume":"6","author":"Wenick","year":"2004","journal-title":"Developmental cell","ISSN":"https:\/\/id.crossref.org\/issn\/1534-5807","issn-type":"print"},{"issue":"1","key":"34_19178470","doi-asserted-by":"crossref","first-page":"249","DOI":"10.1104\/pp.110.1.249","volume":"110","author":"Xu","year":"1996","journal-title":"Plant Physiology","ISSN":"https:\/\/id.crossref.org\/issn\/0032-0889","issn-type":"print"},{"issue":"5565","key":"35_16994037","doi-asserted-by":"publisher","first-page":"79","DOI":"10.1126\/science.1068037","volume":"296","author":"Yu","year":"2002","journal-title":"Science","ISSN":"https:\/\/id.crossref.org\/issn\/0036-8075","issn-type":"print"},{"issue":"9","key":"36_17223180","doi-asserted-by":"publisher","first-page":"698","DOI":"10.1038\/nrg890","volume":"3","author":"Zhang","year":"2002","journal-title":"Nature reviews. Genetics","ISSN":"https:\/\/id.crossref.org\/issn\/1471-0056","issn-type":"print"},{"key":"37_17233411","doi-asserted-by":"publisher","first-page":"247","DOI":"10.1146\/annurev.arplant.53.091401.143329","volume":"53","author":"Zhu","year":"2002","journal-title":"Annual review of plant biology","ISSN":"https:\/\/id.crossref.org\/issn\/0066-4294","issn-type":"print"}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/academic.oup.com\/bioinformatics\/article-pdf\/21\/14\/3074\/16840745\/bti490.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,2,20]],"date-time":"2019-02-20T00:48:31Z","timestamp":1550623711000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-lookup\/doi\/10.1093\/bioinformatics\/bti490"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2005,5,12]]},"references-count":35,"journal-issue":{"issue":"14","published-online":{"date-parts":[[2005,6,29]]},"published-print":{"date-parts":[[2005,7,15]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/bti490","relation":{},"ISSN":["1367-4803","1460-2059"],"issn-type":[{"value":"1367-4803","type":"print"},{"value":"1460-2059","type":"electronic"}],"subject":[],"published":{"date-parts":[[2005,5,12]]}}}