{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,6,9]],"date-time":"2023-06-09T12:40:08Z","timestamp":1686314408114},"reference-count":3,"publisher":"Oxford University Press (OUP)","issue":"18","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2005,9,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: Searches of translated, unannotated genomic DNA sequences against protein databases is a useful early-stage method for discovering protein homologues encoded by the sequence, but generates huge amounts of output data that quickly become impregnable. BlastXtract is a web-based tool for managing and visualizing results from large translated BLAST and FastA searches. It combines the speed and storage benefits of relational database management systems with an easy-to-use graphical navigation map, and greatly facilitates the early exploration of genomic sequence.<\/jats:p>\n               <jats:p>Availability: BlastXtract can be downloaded from http:\/\/bioinfo.ucc.ie\/blastxtract\/<\/jats:p>\n               <jats:p>Contact: \u00a0mclaesson@bioinfo.ucc.ie<\/jats:p>","DOI":"10.1093\/bioinformatics\/bti598","type":"journal-article","created":{"date-parts":[[2005,7,27]],"date-time":"2005-07-27T02:34:03Z","timestamp":1122431643000},"page":"3667-3668","source":"Crossref","is-referenced-by-count":2,"title":["BlastXtract\u2014a new way of exploring translated searches"],"prefix":"10.1093","volume":"21","author":[{"given":"Marcus J.","family":"Claesson","sequence":"first","affiliation":[{"name":"Alimentary Pharmabiotic Centre and Department of Microbiology, National University of Ireland Cork, Ireland"}]},{"given":"Douwe","family":"van Sinderen","sequence":"additional","affiliation":[{"name":"Alimentary Pharmabiotic Centre and Department of Microbiology, National University of Ireland Cork, Ireland"}]}],"member":"286","published-online":{"date-parts":[[2005,7,26]]},"reference":[{"key":"2023060912071225900_B1","doi-asserted-by":"crossref","unstructured":"Altschul, S., et al. 1997Gapped BLAST and PSI_BLAST: a new generation of protein database programs. Nucleic Acids Res.252289\u20133402","DOI":"10.1093\/nar\/25.17.3389"},{"key":"2023060912071225900_B2","unstructured":"Pearson, W.R. and Lipman, D.J. 1988Improved tools for biological sequencecomparison. Proc. Natl Acad. Sci. USA42444\u20132448"},{"key":"2023060912071225900_B3","unstructured":"Robison, K., et al. 1994Large scale bacterial gene discovery by similarity search. Nat. Genet.7205\u2013214"}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/21\/18\/3667\/50554944\/bioinformatics_21_18_3667.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/21\/18\/3667\/50554944\/bioinformatics_21_18_3667.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,6,9]],"date-time":"2023-06-09T12:07:33Z","timestamp":1686312453000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/21\/18\/3667\/202372"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2005,7,26]]},"references-count":3,"journal-issue":{"issue":"18","published-print":{"date-parts":[[2005,9,15]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/bti598","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2005,9]]},"published":{"date-parts":[[2005,7,26]]}}}