{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,8,3]],"date-time":"2024-08-03T18:15:21Z","timestamp":1722708921905},"reference-count":3,"publisher":"Oxford University Press (OUP)","issue":"2","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2006,1,15]]},"abstract":"<jats:title>Abstract<\/jats:title>\n               <jats:p>Summary: An application tool for alignment, template matching and visualization of gene expression time series is presented. The core algorithm is based on dynamic time warping techniques used in the speech recognition field. These techniques allow for non-linear (elastic) alignment of temporal sequences of feature vectors and consequently enable detection of similar shapes with different phases.<\/jats:p>\n               <jats:p>Availability: The Java program, examples and a tutorial are available at<\/jats:p>\n               <jats:p>Contact: \u00a0eltsi@psb.ugent.be<\/jats:p>","DOI":"10.1093\/bioinformatics\/bti787","type":"journal-article","created":{"date-parts":[[2005,11,18]],"date-time":"2005-11-18T01:24:24Z","timestamp":1132277064000},"page":"251-252","source":"Crossref","is-referenced-by-count":24,"title":["Gene Time E\u03c7pression Warper: a tool for alignment, template matching and visualization of gene expression time series"],"prefix":"10.1093","volume":"22","author":[{"given":"Jo","family":"Criel","sequence":"first","affiliation":[{"name":"Devgen N.V., Science IT 1 \u00a0 1 \u00a0 \u00a0 Technologiepark 30, B-9052 Ghent, Belgium"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Elena","family":"Tsiporkova","sequence":"additional","affiliation":[{"name":"Department of Plant Systems Biology, Flanders Interuniversity Institute for Biotechnology (VIB), Ghent University 2 \u00a0 2 \u00a0 \u00a0 Technologiepark 927, B-9052, Ghent, Belgium"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2005,11,17]]},"reference":[{"key":"2023012408305559200_b1","doi-asserted-by":"crossref","first-page":"495","DOI":"10.1093\/bioinformatics\/17.6.495","article-title":"Aligning gene expression time series with time warping algorithms","volume":"17","author":"Aach","year":"2001","journal-title":"Bioinformatics"},{"key":"2023012408305559200_b2","doi-asserted-by":"crossref","first-page":"43","DOI":"10.1109\/TASSP.1978.1163055","article-title":"Dynamic programming algorithm optimization for spoken word recognition","volume":"26","author":"Sakoe","year":"1978","journal-title":"IEEE Trans. Acoust. Speech Signal Process."},{"key":"2023012408305559200_b3","doi-asserted-by":"crossref","first-page":"71","DOI":"10.1016\/S0022-2836(02)00026-8","article-title":"Computational identification of transcription factor binding sites via a transcription-factor-centric clustering algorithm","volume":"318","author":"Zhu","year":"2002","journal-title":"J. Mol. Biol."}],"container-title":["Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/22\/2\/251\/48838574\/bioinformatics_22_2_251.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"syndication"},{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article-pdf\/22\/2\/251\/48838574\/bioinformatics_22_2_251.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2023,1,24]],"date-time":"2023-01-24T08:34:14Z","timestamp":1674549254000},"score":1,"resource":{"primary":{"URL":"https:\/\/academic.oup.com\/bioinformatics\/article\/22\/2\/251\/425307"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2005,11,17]]},"references-count":3,"journal-issue":{"issue":"2","published-print":{"date-parts":[[2006,1,15]]}},"URL":"https:\/\/doi.org\/10.1093\/bioinformatics\/bti787","relation":{},"ISSN":["1367-4811","1367-4803"],"issn-type":[{"value":"1367-4811","type":"electronic"},{"value":"1367-4803","type":"print"}],"subject":[],"published-other":{"date-parts":[[2006,1,15]]},"published":{"date-parts":[[2005,11,17]]}}}