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Evaluation of the integrated network demonstrated that relation integration could improve the reliability of relations by combining evidence from different data sources. Domain expert judgments on the gene functional clusters in the network confirmed the validity of our approach for relation integration and network inference.<\/jats:p><jats:p>Contact: \u00a0jiexun@eller.arizona.edu<\/jats:p>","DOI":"10.1093\/bioinformatics\/btl345","type":"journal-article","created":{"date-parts":[[2006,7,6]],"date-time":"2006-07-06T01:54:39Z","timestamp":1152150879000},"page":"2037-2043","source":"Crossref","is-referenced-by-count":25,"title":["A framework of integrating gene relations from heterogeneous data sources: an experiment on<i>Arabidopsis thaliana<\/i>"],"prefix":"10.1093","volume":"22","author":[{"given":"Jiexun","family":"Li","sequence":"first","affiliation":[{"name":"Department of Management Information Systems, University of Arizona 1 \u00a0 1 \u00a0 \u00a0 Tucson, AZ 85721, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xin","family":"Li","sequence":"additional","affiliation":[{"name":"Department of Management Information Systems, University of Arizona 1 \u00a0 1 \u00a0 \u00a0 Tucson, AZ 85721, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hua","family":"Su","sequence":"additional","affiliation":[{"name":"Department of Management Information Systems, University of Arizona 1 \u00a0 1 \u00a0 \u00a0 Tucson, AZ 85721, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hsinchun","family":"Chen","sequence":"additional","affiliation":[{"name":"Department of Management Information Systems, University of Arizona 1 \u00a0 1 \u00a0 \u00a0 Tucson, AZ 85721, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"David W.","family":"Galbraith","sequence":"additional","affiliation":[{"name":"Department of Plant Sciences, University of Arizona 2 \u00a0 2 \u00a0 \u00a0 Tucson, AZ 85721, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"286","published-online":{"date-parts":[[2006,7,4]]},"reference":[{"key":"2023012409103035300_b1","doi-asserted-by":"crossref","first-page":"2271","DOI":"10.1104\/pp.104.040592","article-title":"Graft transmission of a floral stimulant derived from CONSTANS","volume":"135","author":"Ayre","year":"2004","journal-title":"Plant Physiol."},{"key":"2023012409103035300_b2","doi-asserted-by":"crossref","first-page":"R35","DOI":"10.1186\/gb-2004-5-5-r35","article-title":"Prolinks: a database of protein functional linkages derived from coevolution","volume":"5","author":"Bowers","year":"2004","journal-title":"Genome Biol."},{"key":"2023012409103035300_b3","doi-asserted-by":"crossref","first-page":"1195","DOI":"10.1104\/pp.117.4.1195","article-title":"Gibberellin dose-response regulation of GA4 gene transcript levels in Arabidopsis","volume":"117","author":"Cowling","year":"1998","journal-title":"Plant Physiol."},{"key":"2023012409103035300_b4","doi-asserted-by":"crossref","first-page":"601","DOI":"10.1089\/106652700750050961","article-title":"Using Bayesian networks to analyze expression data","volume":"7","author":"Friedman","year":"2000","journal-title":"J. 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