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This application provides a more objective assessment of sample quality in that both a point estimate and 95% confidence interval about the 3\u2032 to 5\u2032 ratio are provided.<\/jats:p>\n               <jats:p>Availability: The software and installation instructions are freely available for download at<\/jats:p>\n               <jats:p>Contact: \u00a0kjarcher@vcu.edu<\/jats:p>","DOI":"10.1093\/bioinformatics\/btl459","type":"journal-article","created":{"date-parts":[[2006,8,26]],"date-time":"2006-08-26T02:49:55Z","timestamp":1156560595000},"page":"2699-2701","source":"Crossref","is-referenced-by-count":8,"title":["An application for assessing quality of RNA hybridized to Affymetrix GeneChips"],"prefix":"10.1093","volume":"22","author":[{"given":"Kellie J.","family":"Archer","sequence":"first","affiliation":[{"name":"Department of Biostatistics, Virginia Commonwealth University 1 \u00a0 1 \u00a0 \u00a0 Richmond, VA 23298-0032, USA"}]},{"given":"Tobias","family":"Guennel","sequence":"additional","affiliation":[{"name":"Technische Universit\u00e4t Chemnitz, 09107 Chemnitz 2 \u00a0 2 \u00a0 \u00a0 Germany"}]}],"member":"286","published-online":{"date-parts":[[2006,8,25]]},"reference":[{"key":"2023012408431052000_b1","article-title":"Affymetrix","volume-title":"Microarray Suite version 5.0","year":"2001"},{"key":"2023012408431052000_b2","doi-asserted-by":"crossref","first-page":"198","DOI":"10.1093\/biostatistics\/kxj001","article-title":"Assessing quality of hybridized RNA in Affymetrix GeneChip experiments using mixed-effects models","volume":"7","author":"Archer","year":"2006","journal-title":"Biostatistics"},{"key":"2023012408431052000_b3","doi-asserted-by":"crossref","first-page":"292","DOI":"10.1038\/ng1203-292","article-title":"Chipping away at the chip bias: RNA degradation in microarray analysis","volume":"354","author":"Auer","year":"2003","journal-title":"Nature Genet."},{"key":"2023012408431052000_b4","doi-asserted-by":"crossref","first-page":"1994","DOI":"10.1373\/clinchem.2004.033225","article-title":"Evaluation of quality control criteria in microarray gene expression analysis","volume":"50","author":"Dumur","year":"2004","journal-title":"Clin. 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