{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,6,27]],"date-time":"2026-06-27T19:35:24Z","timestamp":1782588924271,"version":"3.54.5"},"reference-count":7,"publisher":"Oxford University Press (OUP)","issue":"2","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":[],"published-print":{"date-parts":[[2007,1,15]]},"abstract":"<jats:title>Abstract<\/jats:title><jats:p>Summary: High-throughput content fingerprinting techniques employing capillary electrophoresis place new demands on the editing of fingerprint files for the downstream contig assembly program, FPC. A cross-platform software application, GenoProfiler, was developed for automated editing of sized fingerprinting profiles generated by the ABI Genetic Analyzers. The batch-processing module extracts the sized fragment information directly from the ABI raw trace files, or from data files exported from GeneMapper or other size calling software, removes the background noise and undesired fragments, and generates fragment size files compatible with the FPC software.<\/jats:p><jats:p>Availability: \u00a0<\/jats:p><jats:p>Contact: \u00a0oandersn@pw.usda.gov<\/jats:p>","DOI":"10.1093\/bioinformatics\/btl494","type":"journal-article","created":{"date-parts":[[2006,10,4]],"date-time":"2006-10-04T01:54:30Z","timestamp":1159926870000},"page":"240-242","source":"Crossref","is-referenced-by-count":35,"title":["GenoProfiler: batch processing of high-throughput capillary fingerprinting data"],"prefix":"10.1093","volume":"23","author":[{"given":"Frank M.","family":"You","sequence":"first","affiliation":[{"name":"Department of Plant Sciences, University of California 1 \u00a0 1 \u00a0 \u00a0 Davis, CA 95616, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Ming-Cheng","family":"Luo","sequence":"additional","affiliation":[{"name":"Department of Plant Sciences, University of California 1 \u00a0 1 \u00a0 \u00a0 Davis, CA 95616, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yong Qiang","family":"Gu","sequence":"additional","affiliation":[{"name":"Western Regional Research Center, Agricultural Research Service, US Department of Agriculture 2 \u00a0 2 \u00a0 \u00a0 800 Buchanan Street, Albany, CA 94710, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Gerard R.","family":"Lazo","sequence":"additional","affiliation":[{"name":"Western Regional Research Center, Agricultural Research Service, US Department of Agriculture 2 \u00a0 2 \u00a0 \u00a0 800 Buchanan Street, Albany, CA 94710, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Karin","family":"Deal","sequence":"additional","affiliation":[{"name":"Department of Plant Sciences, University of California 1 \u00a0 1 \u00a0 \u00a0 Davis, CA 95616, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jan","family":"Dvorak","sequence":"additional","affiliation":[{"name":"Department of Plant Sciences, University of California 1 \u00a0 1 \u00a0 \u00a0 Davis, CA 95616, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Olin D.","family":"Anderson","sequence":"additional","affiliation":[{"name":"Western Regional Research Center, Agricultural Research Service, US Department of Agriculture 2 \u00a0 2 \u00a0 \u00a0 800 Buchanan Street, Albany, CA 94710, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"286","published-online":{"date-parts":[[2006,10,2]]},"reference":[{"key":"2023041107040224400_","doi-asserted-by":"crossref","first-page":"142","DOI":"10.1006\/geno.2001.6547","article-title":"Five-color-based high-information-content fingerprinting of bacterial artificial chromosome clones using type IIS restriction endonucleases","volume":"74","author":"Ding","year":"2001","journal-title":"Genomics"},{"key":"2023041107040224400_","doi-asserted-by":"crossref","first-page":"378","DOI":"10.1016\/S0888-7543(03)00128-9","article-title":"High-throughput fingerprinting of bacterial artificial chromosomes using the SNaPshot\u2122 labeling kit and sizing of restriction fragments by capillary electrophoresis","volume":"82","author":"Luo","year":"2003","journal-title":"Genomics"},{"key":"2023041107040224400_","volume-title":"Numeric Recipes in C: The Art of Scientific Computing","author":"Press","year":"1988"},{"key":"2023041107040224400_","doi-asserted-by":"crossref","first-page":"105","DOI":"10.1186\/1297-9686-36-1-105","article-title":"A first generation bovine BAC-based physical map","volume":"36","author":"Schibler","year":"2004","journal-title":"Genet. 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